Recent Votes
Recent Locations •
All
France, just now
Bergen, Norway, 1 minute ago
Ramat Gan, 1 minute ago
Germany, 1 minute ago
United Kingdom, 2 minutes ago
Netherlands, 3 minutes ago
Netherlands, 3 minutes ago
Recent Awards •
All
Scholar to
rpolicastro
8.1k
Popular Question to
beckyrjb6
▴
20
Popular Question to
v.berriosfarias
▴
50
Scholar to
chrchang523
9.2k
Scholar to
Devon Ryan
101k
Popular Question to
rob234king
▴
600
Recent Replies
Comment: Amino Acid identity matrix help
by
Michael Dondrup
51k
I would advise strongly against it, one could easily cook up some script using blast, doing something but that is most likely going to be d…
Answer: Replicates in sc-RNA seq have different amount of cells-Can I still use them for
by
ATpoint
60k
If you ask me that is completely normal. Even when you load identical numbers of cells into the 10x lanes you will never get exactly even n…
Answer: Amino Acid identity matrix help
by
Michael Dondrup
51k
This is possible, but you should use global alignment or MSA tools for this, Blast is the wrong tool for the job because it does local alig…
Comment: Amino Acid identity matrix help
by
benformatics
★
2.8k
You should just script this yourself... R or python would be easier than bash
Answer: Which statistical test should be used for comparison of a single gene expression
by
Jean-Karim Heriche
25k
Without replicates, you don't get any idea about the underlying distribution of values so you can only say if two numbers are equal or if …
Comment: Which statistical test should be used for comparison of a single gene expression
by
Shred
▴
620
For the second question, you may be looking for a t-test. Read more here https://compgenomr.github.io/book/how-to-test-for-differences-betw…
Comment: topGO error: Building most specific GOs ..... ( 0 GO terms found. )
by
Jean-Karim Heriche
25k
Check the manual/docs. I think that readMappings() is meant to read a custom annotation file, e.g. your file "go_annotations.txt". Currentl…
Comment: LFTP fails to submit files to the EGA sequence database
by
Jean-Karim Heriche
25k
lftp should continue until all files are submitted or a fatal error occurs. Check that you got the right address. FTP servers often have an…
Comment: Count number of times a value appear in correlation matrix
by
ali
•
0
> dput(cor.matrix)
structure(c(1, -0.191900129370209, -0.19667841893541, -0.132908907990152,
0.00273486675878516, …
Comment: Parsing SAM files with java
by
cmdcolin
★
2.1k
one thing that may be of interest: SAM files are plaintext, some basic operations can be done with very basic text operations so it may dep…
Comment: Problems installing cutadapt with conda
by
Camila Martínez
▴
30
Thanks. I didn't know about the "Accept" button. I just did it.
Comment: plink bim file stops at chrM
by
rturba
▴
10
Hmmmmmmmmmmmm... It's because the way this genome was defined was that chr19 is the chrX. So I renamed from chrXIX to X and therefore it sk…
Comment: plink bim file stops at chrM
by
chrchang523
9.2k
That's due to your incorrect use of `--chr-set 20`.
Comment: Beginners bioinformatics project with machine learning?
by
godwin
▴
50
Thank you so much. You were really helpful.
Traffic: 2106 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6