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Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
Answer: Which statistical test should be used for comparison of a single gene expression
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Comment: Which statistical test should be used for comparison of a single gene expression
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Interpretation of functional prediction pathogenicity scores regarding variants with multiple transcripts in ANNOVAR
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I would advise strongly against it, one could easily cook up some script using blast, doing something but that is most likely going to be d…
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If you ask me that is completely normal. Even when you load identical numbers of cells into the 10x lanes you will never get exactly even n…
Answer: Amino Acid identity matrix help
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Michael Dondrup
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This is possible, but you should use global alignment or MSA tools for this, Blast is the wrong tool for the job because it does local alig…
Comment: Amino Acid identity matrix help
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benformatics
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You should just script this yourself... R or python would be easier than bash
Answer: Which statistical test should be used for comparison of a single gene expression
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Jean-Karim Heriche
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Without replicates, you don't get any idea about the underlying distribution of values so you can only say if two numbers are equal or if …
Comment: Which statistical test should be used for comparison of a single gene expression
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Shred
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For the second question, you may be looking for a t-test. Read more here https://compgenomr.github.io/book/how-to-test-for-differences-betw…
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Check the manual/docs. I think that readMappings() is meant to read a custom annotation file, e.g. your file "go_annotations.txt". Currentl…
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lftp should continue until all files are submitted or a fatal error occurs. Check that you got the right address. FTP servers often have an…
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ali
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> dput(cor.matrix) structure(c(1, -0.191900129370209, -0.19667841893541, -0.132908907990152, 0.00273486675878516, …
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one thing that may be of interest: SAM files are plaintext, some basic operations can be done with very basic text operations so it may dep…
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Thanks. I didn't know about the "Accept" button. I just did it.
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Hmmmmmmmmmmmm... It's because the way this genome was defined was that chr19 is the chrX. So I renamed from chrXIX to X and therefore it sk…
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chrchang523
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That's due to your incorrect use of `--chr-set 20`.
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Yes of course the code can be shortened :).
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godwin
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Thank you so much. You were really helpful.
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