Showing: sedreset
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Question: Mean and SD read length from a range of fastq files
fastq awk sed sequencing written 19 months ago by eoin30 • updated 21 days ago by savscosta0
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2
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206
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sed regex code help wanted
microbiome regular expressions sed written 8 weeks ago by bgold040 • updated 8 weeks ago by RamRS18k
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193
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removing line breaks and adding carriage returns
tr windows format document sed \n \r\n written 3 months ago by James10 • updated 3 months ago by finswimmer6.0k
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4
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249
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Join multiple sequence lines in to one.
alignment sequence sed awk written 4 months ago by MB0 • updated 4 months ago by cpad01129.3k
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3
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Changing names of Fasta headers
fasta sequence sed unix bash loop written 7 months ago by tpaisie70 • updated 4 months ago by h.mon20k
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300
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7
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307
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2
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331
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how to extract/grep lines containing specific word?
grep sed awk written 7 months ago by arsilan32460 • updated 7 months ago by Kevin Blighe30k
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4
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429
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Remove text and keep '> + ID' in fasta file
fasta sed written 7 months ago by Harumi10 • updated 7 months ago by Alex Reynolds26k
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297
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updating a cell in a file
sed shell awk written 7 months ago by vinayjrao100 • updated 7 months ago by Shred60
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476
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Changing fasta headers in multifasta file
sed written 8 months ago by James10 • updated 8 months ago by genomax57k
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How do I add ">" symbol to FASTA headers?
fasta sed awk written 8 months ago by Alec Watanabe30 • updated 8 months ago by genomax57k
2
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344
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How to delete all but a certain pattern using sed
sed bash written 9 months ago by arsilan32460 • updated 9 months ago by Pierre Lindenbaum112k
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371
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4
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758
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Extracting accession number from header using sed
accession number sed written 13 months ago by ToastedGoat10 • updated 13 months ago by genomax57k
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fasta files: keep only lines containing certain characters + the respective sequences
fasta grep sed written 15 months ago by Tmatamatamas0 • updated 15 months ago by Paul1.1k
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476
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[SOLVED] manipulating text in linux enviroment
pipeline sed file manipulation awk written 4.4 years ago by theodore40 • updated 18 months ago by Biostar ♦♦ 20
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Extracting pairwise alignment info
pairwise alignement grep sed unix awk written 20 months ago by Kevin D10 • updated 20 months ago by 5heikki7.7k
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Remove duplicates in fasta file based on ID
fasta sed sort written 3.4 years ago by oliver.bayfield100 • updated 20 months ago by Eslam Samir100
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758
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Renaming and editing a bed file
bed chip-seq sed awk written 21 months ago by Debbie10 • updated 21 months ago by Alex Reynolds26k
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5
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samtools/sed for editing bam file
sed samtools written 21 months ago by vision01710
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4
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how to replace dot as 'Missing' value for all columns using sed
sed linux written 23 months ago by newbiebio80 • updated 23 months ago by Jorge Amigo11k
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11
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Extract data using awk/sed and output to different files
sed shell awk written 2.5 years ago by Tao240 • updated 2.5 years ago by Alex Reynolds26k
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