Showing: sedreset
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5
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200
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Proper sed format to remove and of line characters?
fasta sed written 24 days ago by stacy73430 • updated 24 days ago by jcabraham0
24
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7
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8.6k
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10 follow
7
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Remove duplicates in fasta file based on ID
fasta sed sort written 3.6 years ago by oliver.bayfield110 • updated 4 weeks ago by michau10
5
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1
answer
239
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1
answer
awk and sed in bash script and no output
bash sed awk written 4 weeks ago by bk1130 • updated 4 weeks ago by Alex Reynolds26k
3
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1
answer
170
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1
answer
Replace between character and white space using unix sed
replace sed unix written 9 weeks ago by dllopezr40 • updated 9 weeks ago by Kevin Blighe33k
12
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1
answer
248
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1
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Add text in somewhere middle of line using information from the same line in file.
sed unix awk written 9 weeks ago by bk1130 • updated 9 weeks ago by jrj.healey9.2k
15
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1
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238
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1
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8
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1
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2.0k
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1
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Question: Mean and SD read length from a range of fastq files
fastq awk sed sequencing written 21 months ago by eoin30 • updated 12 weeks ago by savscosta0
3
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2
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265
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5 follow
2
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sed regex code help wanted
microbiome regular expressions sed written 4 months ago by bgold040 • updated 4 months ago by RamRS19k
0
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0
answers
239
views
0
answers
removing line breaks and adding carriage returns
tr windows format document sed \n \r\n written 5 months ago by James20 • updated 5 months ago by finswimmer8.2k
6
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4
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273
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5 follow
4
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Join multiple sequence lines in to one.
alignment sequence sed awk written 6 months ago by MB0 • updated 6 months ago by cpad011210k
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3
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1.1k
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3
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Changing names of Fasta headers
fasta sequence sed unix bash loop written 9 months ago by tpaisie70 • updated 6 months ago by h.mon22k
5
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2
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337
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2
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7
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2
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354
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7 follow
2
answers
2
votes
1
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533
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1
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how to extract/grep lines containing specific word?
grep sed awk written 9 months ago by arsilan32460 • updated 9 months ago by Kevin Blighe33k
18
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4
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500
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7 follow
4
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Remove text and keep '> + ID' in fasta file
fasta sed written 9 months ago by Harumi10 • updated 9 months ago by Alex Reynolds26k
0
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1
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334
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1
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updating a cell in a file
sed shell awk written 9 months ago by vinayjrao110 • updated 9 months ago by Shred70
3
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1
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596
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5 follow
1
answer
Changing fasta headers in multifasta file
sed written 10 months ago by James20 • updated 10 months ago by genomax59k
7
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3
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517
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5 follow
3
answers
How do I add ">" symbol to FASTA headers?
fasta sed awk written 10 months ago by Alec Watanabe30 • updated 10 months ago by genomax59k
2
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1
answer
397
views
1
answer
How to delete all but a certain pattern using sed
sed bash written 11 months ago by arsilan32460 • updated 11 months ago by Pierre Lindenbaum115k
0
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0
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399
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0
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4
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2
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870
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5 follow
2
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Extracting accession number from header using sed
accession number sed written 15 months ago by ToastedGoat10 • updated 15 months ago by genomax59k
10
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3
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731
views
9 follow
3
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fasta files: keep only lines containing certain characters + the respective sequences
fasta grep sed written 17 months ago by Tmatamatamas0 • updated 17 months ago by Paul1.2k
0
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0
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522
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0
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6
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3
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1.3k
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3
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[SOLVED] manipulating text in linux enviroment
pipeline sed file manipulation awk written 4.6 years ago by theodore40 • updated 20 months ago by Biostar ♦♦ 20
9
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3
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661
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3
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1
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2
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1.1k
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2
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3
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2
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742
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2
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Extracting pairwise alignment info
pairwise alignement grep sed unix awk written 22 months ago by Kevin D10 • updated 22 months ago by 5heikki7.9k
0
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1
answer
809
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1
answer
Renaming and editing a bed file
bed chip-seq sed awk written 23 months ago by Debbie10 • updated 23 months ago by Alex Reynolds26k
2
votes
1
answer
883
views
1
answer
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