Showing: sedreset
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21
votes
4
answers
181
views
7 follow
4
answers
Remove double vertical bar "||" at the end of the sequence in a fasta file
fasta sed awk written 16 days ago by Ambika30 • updated 16 days ago by SMK1.8k
8
votes
1
answer
171
views
1
answer
Using awk or sed to edit a column in a gtf file
awk sed gft linux written 6 weeks ago by imda10 • updated 6 weeks ago by geek_y9.8k
6
votes
2
answers
100
views
6 follow
2
answers
6
votes
1
answer
237
views
5 follow
1
answer
3
votes
1
answer
211
views
1
answer
Splitting string in a column using character
regex sed snp awk written 4 months ago by sofie_carolina20 • updated 4 months ago by zx87547.8k
5
votes
2
answers
219
views
2
answers
How to rename duplicate fasta headers after the first underscore '_'?
fasta duplicate header sed awk written 4 months ago by MB20 • updated 4 months ago by Carambakaracho1.4k
1
vote
0
answers
191
views
0
answers
6
votes
1
answer
313
views
1
answer
How to extract organisms name from the headers in a multi-fasta file?
fasta header sed regex written 4 months ago by MB20 • updated 4 months ago by finswimmer11k
4
votes
3
answers
334
views
3
answers
3
votes
1
answer
265
views
1
answer
Awk, Sed, Grep to create a sequential numerical text replacement in my gtf file
grep sed awk written 6 months ago by sdbaney0 • updated 6 months ago by RamRS22k
2
votes
1
answer
285
views
1
answer
Proper sed format to remove and of line characters?
fasta sed written 7 months ago by stacy73440 • updated 7 months ago by jcabraham0
5
votes
1
answer
517
views
1
answer
awk and sed in bash script and no output
bash sed awk written 8 months ago by bk1130 • updated 8 months ago by Alex Reynolds28k
5
votes
1
answer
344
views
1
answer
3
votes
1
answer
317
views
1
answer
Replace between character and white space using unix sed
replace sed unix written 9 months ago by dllopezr40 • updated 9 months ago by Kevin Blighe45k
12
votes
1
answer
349
views
1
answer
Add text in somewhere middle of line using information from the same line in file.
sed unix awk written 9 months ago by bk1130 • updated 9 months ago by jrj.healey13k
15
votes
1
answer
411
views
1
answer
3
votes
2
answers
417
views
5 follow
2
answers
sed regex code help wanted
microbiome regular expressions sed written 11 months ago by bgold040 • updated 11 months ago by RamRS22k
0
votes
0
answers
473
views
0
answers
removing line breaks and adding carriage returns
tr windows format document sed \n \r\n written 12 months ago by James20 • updated 12 months ago by finswimmer11k
6
votes
4
answers
383
views
5 follow
4
answers
Join multiple sequence lines in to one.
alignment sequence sed awk written 13 months ago by MB20 • updated 13 months ago by cpad011211k
5
votes
2
answers
456
views
2
answers
7
votes
2
answers
536
views
7 follow
2
answers
2
votes
1
answer
1.5k
views
1
answer
how to extract/grep lines containing specific word?
grep sed awk written 16 months ago by arsilan32470 • updated 16 months ago by Kevin Blighe45k
0
votes
3
answers
2.1k
views
3
answers
Changing names of Fasta headers
fasta sequence sed unix bash loop written 16 months ago by tpaisie70 • updated 13 months ago by h.mon26k
18
votes
4
answers
680
views
7 follow
4
answers
Remove text and keep '> + ID' in fasta file
fasta sed written 16 months ago by Harumi10 • updated 16 months ago by Alex Reynolds28k
0
votes
1
answer
443
views
1
answer
updating a cell in a file
sed shell awk written 16 months ago by vinayjrao130 • updated 16 months ago by Shred150
3
votes
1
answer
975
views
5 follow
1
answer
Changing fasta headers in multifasta file
sed written 17 months ago by James20 • updated 17 months ago by genomax69k
7
votes
3
answers
837
views
5 follow
3
answers
How do I add ">" symbol to FASTA headers?
fasta sed awk written 17 months ago by Alec Watanabe60 • updated 17 months ago by genomax69k
2
votes
1
answer
506
views
1
answer
How to delete all but a certain pattern using sed
sed bash written 18 months ago by arsilan32470 • updated 18 months ago by Pierre Lindenbaum121k
0
votes
0
answers
492
views
0
answers
4
votes
2
answers
1.2k
views
5 follow
2
answers
Extracting accession number from header using sed
accession number sed written 22 months ago by ToastedGoat10 • updated 22 months ago by genomax69k
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