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5
votes
2
answers
9.8k
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2
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Gff Or Bed File For Hg19 Genome
genome seq gff hg19 written 5.0 years ago by rob.costa1234 • 150 • updated 3 months ago by h.mon ♦ 18k
0
votes
0
answers
149
views
0
answers
Select union of multiple-sample VCF
vcf seq next-gen written 3 months ago by Zcat2010 • 0
4
votes
2
answers
268
views
2
answers
Comparing 2 Columns at once
R seq written 6 months ago by mail2steff • 30 • updated 6 months ago by shoujun.gu • 340
2
votes
1
answer
445
views
1
answer
Printing features of a specific type only from a Genbank file with Biopython
seq biopython genbank seqio written 14 months ago by Jacob • 10 • updated 14 months ago by a.zielezinski ♦ 8.4k
1
vote
0
answers
1.7k
views
0
answers
How To Tune Parameters When Running Shrimp2 On Longer Illumina Reads
seq variation miseq alignment written 5.6 years ago by kanwarjag • 890 • updated 17 months ago by Biostar ♦♦ 20
5
votes
2
answers
998
views
2
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How to merge paired-end reads from sam files?
seq paired-end bwa written 18 months ago by aquaq • 10 • updated 18 months ago by WouterDeCoster ♦ 31k
2
votes
0
answers
649
views
0
answers
Calculating p-distance for multiple fast files
perl seq dna python divergence written 18 months ago by Miguy • 0
0
votes
0
answers
465
views
0
answers
How to get 1500 gene name each for Bacteria, Protozoa, Fungi, Plants, Animals & Mammals?
gene seq written 20 months ago by Naresh • 60
3
votes
1
answer
903
views
1
answer
Extract DNA sequence based on a single coordinate
seq extract R python written 23 months ago by ThePresident • 100
5
votes
2
answers
1.0k
views
2
answers
The Number Substitute The Character
exome seq written 6.1 years ago by camelbbs • 630 • updated 2.2 years ago by Biostar ♦♦ 20
0
votes
0
answers
1.9k
views
0
answers
Trouble shooting with cutadapt -bash: cutadapt: command not found
seq sgrna cutadapt written 2.2 years ago by Pigasos83 • 0
1
vote
2
answers
677
views
2
answers
Retrieving large datasets from NCBI
assembly seq written 2.3 years ago by Naresh • 60 • updated 2.3 years ago by pld ♦ 4.7k
6
votes
1
answer
1.0k
views
1
answer
Is it possible to include BBMap in Bcbio-nextgen pipeline?
seq wg soft sequencing written 2.7 years ago by elvissober • 20 • updated 2.7 years ago by Brad Chapman ♦ 9.2k
2
votes
1
answer
852
views
1
answer
Visualization of DNA composition
seq sequencing written 2.7 years ago by John ♦ 12k • updated 2.7 years ago by Alex Reynolds ♦ 25k
2
votes
2
answers
1.2k
views
2
answers
Chip Seq Peaks/ Enrichment Profilig?
seq next-gen chip-seq written 2.8 years ago by morovatunc • 360 • updated 2.8 years ago by Ming Tang • 2.3k
12
votes
5
answers
1.3k
views
5
answers
How else can one quantify a DNA sequence besides GC-content and length?
genome gene gc sequence seq written 3.0 years ago by jolespin • 110 • updated 3.0 years ago by Lars Juhl Jensen ♦ 11k
6
votes
1
answer
2.5k
views
1
answer
bgzip all VCFs in a directory
seq sequencing written 3.0 years ago by stevenlang123 • 130 • updated 3.0 years ago by Pierre Lindenbaum ♦ 111k
2
votes
0
answers
1.2k
views
0
answers
Haplotype Reference consortium Release!
seq imputation written 3.2 years ago by muralinmars • 70 • updated 3.1 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.4k
views
1
answer
Impact of mutations in conserved and non-conserved regions - !?
conservation seq snps written 3.2 years ago by muralinmars • 70 • updated 3.2 years ago by Devon Ryan ♦ 82k
1
vote
1
answer
1.4k
views
1
answer
samtools error when using pipeline view/sort/index
seq next-gen samtools snp pipeline written 3.3 years ago by deepue • 110 • updated 3.3 years ago by dariober ♦ 9.3k
9
votes
2
answers
2.9k
views
2
answers
Bowtie2 local alignment SAM file SEQ output - reverse complement or not ?
bowtie2 seq strandness strandspecificity sam written 3.5 years ago by Roger • 0 • updated 3.5 years ago by Istvan Albert ♦♦ 77k
5
votes
2
answers
2.7k
views
6 follow
2
answers
Need Suggestions To Set Up A Mirna Seq Pipeline
seq written 6.0 years ago by cameliaq • 30 • updated 3.5 years ago by Biostar ♦♦ 20
11
votes
3
answers
1.6k
views
3
answers
Why s == s.reverse_complement().reverse_complement() is False ? (Biopython)
seq python written 3.7 years ago by hydrofilie • 10 • updated 3.7 years ago by Philipp Bayer ♦ 5.6k
2
votes
1
answer
939
views
1
answer
List of valid tables for Seq.translate()
python seq written 3.7 years ago by hydrofilie • 10 • updated 3.7 years ago by Matt Shirley ♦ 8.5k
1
vote
2
answers
1.3k
views
2
answers
Where Can I Download Some Short Dna Reads That Only Contains Snps?
short read dna seq written 4.7 years ago by Sami Salami • 0 • updated 4.1 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.9k
views
1
answer
Can Chip Sequencing Be Used To Make Exploratory Findings About Histone Tail Methylation?
seq methylation written 4.4 years ago by davidbassily1 • 10 • updated 4.4 years ago by Asaf ♦ 4.8k
3
votes
1
answer
1.9k
views
1
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If A Read Is Clipped, What Is The Preferred Way To Make Tag Counts?
seq written 5.5 years ago by KCC • 3.9k • updated 4.4 years ago by Biostar ♦♦ 20
1
vote
2
answers
1.3k
views
2
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Exome Sequence Work Flow
exome seq written 4.4 years ago by Raju • 30 • updated 4.4 years ago by Dan Gaston ♦ 7.0k
5
votes
2
answers
2.4k
views
2
answers
Iteratively Concatenate An Arbitrary Number Of Seq Objects Using Biopython
seq biopython written 4.5 years ago by mossmatters • 90 • updated 4.5 years ago by Peter ♦ 5.6k
3
votes
0
answers
1.5k
views
0
answers
Edger Gof Plots
seq analysis edger written 4.6 years ago by seqsearch • 30
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