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News: Training in Bioinformatics for Beginners @ NIH, USA, Jan 15-18,2019
beginners bioinformatics news training seq written 3 months ago by AABI • 110
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313
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5 follow
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protein profile from alignment
profile protein seq terminal python written 3 months ago by Xylanaser • 10 • updated 3 months ago by fishgolden • 360
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8 follow
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I Wonder Why It Is So Important To Use Seq Objects In Stead Of Plain Ol' Strings In Biopyton?
python tutorial biopython seq written 8.8 years ago by Vlinxify • 100 • updated 5 months ago by RamRS ♦ 20k
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11k
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Gff Or Bed File For Hg19 Genome
genome seq gff hg19 written 5.5 years ago by rob.costa1234 • 150 • updated 9 months ago by h.mon ♦ 23k
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Select union of multiple-sample VCF
vcf seq next-gen written 9 months ago by Zcat2010 • 0
4
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2
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363
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Comparing 2 Columns at once
R seq written 12 months ago by mail2steff • 50 • updated 12 months ago by shoujun.gu • 360
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1
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1
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Printing features of a specific type only from a Genbank file with Biopython
seq biopython genbank seqio written 20 months ago by Jacob • 10 • updated 20 months ago by a.zielezinski ♦ 8.5k
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How To Tune Parameters When Running Shrimp2 On Longer Illumina Reads
seq variation miseq alignment written 6.1 years ago by kanwarjag • 930 • updated 23 months ago by Biostar ♦♦ 20
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1.3k
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How to merge paired-end reads from sam files?
seq paired-end bwa written 24 months ago by aquaq • 10 • updated 24 months ago by WouterDeCoster ♦ 36k
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Calculating p-distance for multiple fast files
perl seq dna python divergence written 24 months ago by Miguy • 0
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557
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How to get 1500 gene name each for Bacteria, Protozoa, Fungi, Plants, Animals & Mammals?
gene seq written 2.2 years ago by Naresh • 60
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1
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1.1k
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1
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Extract DNA sequence based on a single coordinate
seq extract R python written 2.5 years ago by ThePresident • 100
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1.1k
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2
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The Number Substitute The Character
exome seq written 6.6 years ago by camelbbs • 650 • updated 2.7 years ago by Biostar ♦♦ 20
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Trouble shooting with cutadapt -bash: cutadapt: command not found
seq sgrna cutadapt written 2.7 years ago by Pigasos83 • 0
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770
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Retrieving large datasets from NCBI
assembly seq written 2.8 years ago by Naresh • 60 • updated 2.8 years ago by pld ♦ 4.8k
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1
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1.2k
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1
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Is it possible to include BBMap in Bcbio-nextgen pipeline?
seq wg soft sequencing written 3.2 years ago by elvissober • 20 • updated 3.2 years ago by Brad Chapman ♦ 9.3k
2
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1
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937
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1
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Visualization of DNA composition
seq sequencing written 3.2 years ago by John ♦ 12k • updated 3.2 years ago by Alex Reynolds ♦ 27k
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1.4k
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Chip Seq Peaks/ Enrichment Profilig?
seq next-gen chip-seq written 3.4 years ago by morovatunc • 400 • updated 3.4 years ago by Ming Tang • 2.4k
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How else can one quantify a DNA sequence besides GC-content and length?
genome gene gc sequence seq written 3.5 years ago by jolespin • 110 • updated 3.5 years ago by Lars Juhl Jensen ♦ 11k
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bgzip all VCFs in a directory
seq sequencing written 3.5 years ago by stevenlang123 • 140 • updated 3.5 years ago by Pierre Lindenbaum ♦ 116k
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Haplotype Reference consortium Release!
seq imputation written 3.7 years ago by muralinmars • 70 • updated 3.6 years ago by Biostar ♦♦ 20
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1
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1.7k
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1
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Impact of mutations in conserved and non-conserved regions - !?
conservation seq snps written 3.7 years ago by muralinmars • 70 • updated 3.7 years ago by Devon Ryan ♦ 88k
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1
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1.5k
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samtools error when using pipeline view/sort/index
seq next-gen samtools snp pipeline written 3.8 years ago by deepue • 110 • updated 3.8 years ago by dariober ♦ 9.9k
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Bowtie2 local alignment SAM file SEQ output - reverse complement or not ?
bowtie2 seq strandness strandspecificity sam written 4.0 years ago by Roger • 0 • updated 4.0 years ago by Istvan Albert ♦♦ 79k
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6 follow
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Need Suggestions To Set Up A Mirna Seq Pipeline
seq written 6.5 years ago by cameliaq • 30 • updated 4.0 years ago by Biostar ♦♦ 20
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3
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1.8k
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3
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Why s == s.reverse_complement().reverse_complement() is False ? (Biopython)
seq python written 4.2 years ago by hydrofilie • 10 • updated 4.2 years ago by Philipp Bayer ♦ 5.9k
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List of valid tables for Seq.translate()
python seq written 4.2 years ago by hydrofilie • 10 • updated 4.2 years ago by Matt Shirley ♦ 8.8k
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Where Can I Download Some Short Dna Reads That Only Contains Snps?
short read dna seq written 5.2 years ago by Sami Salami • 0 • updated 4.6 years ago by Biostar ♦♦ 20
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2.0k
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Can Chip Sequencing Be Used To Make Exploratory Findings About Histone Tail Methylation?
seq methylation written 4.9 years ago by davidbassily1 • 10 • updated 4.9 years ago by Asaf ♦ 5.2k
3
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If A Read Is Clipped, What Is The Preferred Way To Make Tag Counts?
seq written 6.0 years ago by KCC • 3.9k • updated 4.9 years ago by Biostar ♦♦ 20
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