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32
votes
5
answers
3.1k
views
8 follow
5
answers
I Wonder Why It Is So Important To Use Seq Objects In Stead Of Plain Ol' Strings In Biopyton?
python tutorial biopython seq written 9.2 years ago by Vlinxify • 100 • updated 16 minutes ago by Biostar ♦♦ 20
0
votes
0
answers
51
views
0
answers
want to make COG ANNOTATION
ncbi annotation proteins seq cog written 6 days ago by chaudharynaveen.999 • 0
9
votes
1
answer
3.5k
views
1
answer
bgzip all VCFs in a directory
seq sequencing written 3.9 years ago by stevenlang123 • 150 • updated 3 months ago by RamRS ♦ 22k
0
votes
0
answers
397
views
0
answers
News: Training in Bioinformatics for Beginners @ NIH, USA, Jan 15-18,2019
beginners bioinformatics news training seq written 8 months ago by AABI • 120
2
votes
2
answers
428
views
5 follow
2
answers
protein profile from alignment
profile protein seq terminal python written 8 months ago by Xylanaser • 20 • updated 8 months ago by fishgolden • 390
6
votes
2
answers
12k
views
2
answers
Gff Or Bed File For Hg19 Genome
genome seq gff hg19 written 5.9 years ago by rob.costa1234 • 170 • updated 14 months ago by h.mon ♦ 26k
0
votes
0
answers
481
views
0
answers
Select union of multiple-sample VCF
vcf seq next-gen written 14 months ago by Zcat2010 • 0
4
votes
2
answers
426
views
2
answers
Comparing 2 Columns at once
R seq written 17 months ago by mail2steff • 50 • updated 17 months ago by shoujun.gu • 370
2
votes
1
answer
698
views
1
answer
Printing features of a specific type only from a Genbank file with Biopython
seq biopython genbank seqio written 2.1 years ago by Jacob • 10 • updated 2.1 years ago by a.zielezinski ♦ 8.7k
1
vote
0
answers
1.9k
views
0
answers
How To Tune Parameters When Running Shrimp2 On Longer Illumina Reads
seq variation miseq alignment written 6.5 years ago by kanwarjag • 970 • updated 2.4 years ago by Biostar ♦♦ 20
5
votes
2
answers
1.4k
views
2
answers
How to merge paired-end reads from sam files?
seq paired-end bwa written 2.4 years ago by aquaq • 10 • updated 2.4 years ago by WouterDeCoster ♦ 40k
2
votes
0
answers
957
views
0
answers
Calculating p-distance for multiple fast files
perl seq dna python divergence written 2.4 years ago by Miguy • 0
0
votes
0
answers
626
views
0
answers
How to get 1500 gene name each for Bacteria, Protozoa, Fungi, Plants, Animals & Mammals?
gene seq written 2.6 years ago by Naresh • 60
4
votes
1
answer
1.3k
views
1
answer
Extract DNA sequence based on a single coordinate
seq extract R python written 2.9 years ago by ThePresident • 110
5
votes
2
answers
1.2k
views
2
answers
The Number Substitute The Character
exome seq written 7.0 years ago by camelbbs • 650 • updated 3.1 years ago by Biostar ♦♦ 20
1
vote
1
answer
2.9k
views
1
answer
Trouble shooting with cutadapt -bash: cutadapt: command not found
seq sgrna cutadapt written 3.1 years ago by Pigasos83 • 0
1
vote
2
answers
842
views
2
answers
Retrieving large datasets from NCBI
assembly seq written 3.2 years ago by Naresh • 60 • updated 3.2 years ago by pld ♦ 4.8k
6
votes
1
answer
1.3k
views
1
answer
Is it possible to include BBMap in Bcbio-nextgen pipeline?
seq wg soft sequencing written 3.6 years ago by elvissober • 20 • updated 3.6 years ago by Brad Chapman ♦ 9.4k
2
votes
1
answer
1.0k
views
1
answer
Visualization of DNA composition
seq sequencing written 3.6 years ago by John ♦ 12k • updated 3.6 years ago by Alex Reynolds ♦ 28k
2
votes
2
answers
1.5k
views
2
answers
Chip Seq Peaks/ Enrichment Profilig?
seq next-gen chip-seq written 3.8 years ago by morovatunc • 400 • updated 3.8 years ago by Ming Tang • 2.5k
12
votes
5
answers
1.5k
views
5
answers
How else can one quantify a DNA sequence besides GC-content and length?
genome gene gc sequence seq written 3.9 years ago by jolespin • 120 • updated 3.9 years ago by Lars Juhl Jensen ♦ 11k
2
votes
0
answers
1.5k
views
0
answers
Haplotype Reference consortium Release!
seq imputation written 4.1 years ago by muralinmars • 70 • updated 4.0 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.9k
views
1
answer
Impact of mutations in conserved and non-conserved regions - !?
conservation seq snps written 4.1 years ago by muralinmars • 70 • updated 4.1 years ago by Devon Ryan ♦ 91k
1
vote
1
answer
1.6k
views
1
answer
samtools error when using pipeline view/sort/index
seq next-gen samtools snp pipeline written 4.2 years ago by deepue • 110 • updated 4.2 years ago by dariober ♦ 10k
9
votes
2
answers
3.5k
views
2
answers
Bowtie2 local alignment SAM file SEQ output - reverse complement or not ?
bowtie2 seq strandness strandspecificity sam written 4.4 years ago by Roger • 0 • updated 4.4 years ago by Istvan Albert ♦♦ 80k
5
votes
2
answers
3.1k
views
6 follow
2
answers
Need Suggestions To Set Up A Mirna Seq Pipeline
seq written 6.9 years ago by cameliaq • 30 • updated 4.4 years ago by Biostar ♦♦ 20
11
votes
3
answers
1.9k
views
3
answers
Why s == s.reverse_complement().reverse_complement() is False ? (Biopython)
seq python written 4.7 years ago by hydrofilie • 10 • updated 4.7 years ago by Philipp Bayer ♦ 6.3k
2
votes
1
answer
1.2k
views
1
answer
List of valid tables for Seq.translate()
python seq written 4.7 years ago by hydrofilie • 10 • updated 4.7 years ago by Matt Shirley ♦ 9.0k
1
vote
2
answers
1.5k
views
2
answers
Where Can I Download Some Short Dna Reads That Only Contains Snps?
short read dna seq written 5.6 years ago by Sami Salami • 0 • updated 5.0 years ago by Biostar ♦♦ 20
2
votes
1
answer
2.1k
views
1
answer
Can Chip Sequencing Be Used To Make Exploratory Findings About Histone Tail Methylation?
seq methylation written 5.3 years ago by davidbassily1 • 10 • updated 5.3 years ago by Asaf ♦ 6.1k
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