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<prev • 4,471 results • page 1 of 150 • next >
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Why do we need a .fai file and a .dict file of the reference during alignment and variant calling using GATK?
sequencing gatk next-gen file_formats alignment written 4 hours ago by Cookie-san • 0 • updated 2 hours ago by Pierre Lindenbaum ♦ 119k
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70
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What is a Chimera with regards to NGS?
ngs next-gen sequencing written 1 day ago by Cookie-san • 0
7
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2
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81
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2
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some unrelated info in SAM file generated by BWA
sequencing written 10 hours ago by zhangdengwei • 10 • updated 10 hours ago by Bastien Hervé ♦ 4.0k
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77
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RNA Seq analysis of rice samples
next-gen rna-seq sequencing written 1 day ago by alim.hcu • 0
3
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1
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71
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1
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Combine paired-end fastq files
next-gen sequencing written 1 day ago by 112498262 • 0 • updated 1 day ago by genomax ♦ 65k
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126
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Best tool for quality trimming at 5 prime?
next-gen quality-control sequencing written 5 weeks ago by crespialba • 10 • updated 1 day ago by Biostar ♦♦ 20
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38
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Advice on publishing maximum likelihood trees
phylogenetics maximum likelihood sequencing written 1 day ago by weedy23 • 30
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41
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0
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Cis element analysis and coexpression analysis
gene chip-seq sequencing written 2 days ago by ananyakumari57 • 0
2
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0
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104
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how to extract only exon from copynumber called by Varscan2?
sequence next-gen snp sequencing written 2 days ago by 9521ljh • 0
4
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2
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426
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2
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fasta to fastq without quality scores
sequence next-gen rna-seq sequencing written 6 months ago by inayatkhan8185 • 0 • updated 2 days ago by christian.rinke • 0
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2
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118
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2
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what is next step to find the disease?
gene next-gen sequence sequencing written 2 days ago by 9521ljh • 0 • updated 2 days ago by JC ♦ 7.7k
2
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2
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71
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2
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Can I conclude anything from MiSeq primer reads?
sequencing written 3 days ago by francois • 10 • updated 2 days ago by Friederike ♦ 3.6k
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53
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is it possible gene pathway analysis according to mutation type?
alignment snp sequencing written 3 days ago by 9521ljh • 0
2
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0
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105
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How to see how many times a sequence of ~7000 bp occurs in long reads?
alignment next-gen sequencing written 4 days ago by bas1993 • 10 • updated 4 days ago by genomax ♦ 65k
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1
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88
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How much importance is RNAseq experimental bias?
sequence alignment rna-seq sequencing written 6 days ago by Jon • 90 • updated 6 days ago by Devon Ryan ♦ 89k
2
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141
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Is there a way to compare single-cell RNA seq and Ribotag-seq?
gene next-gen rna-seq sequencing written 15 days ago by Jon • 90
2
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2
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188
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2
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Bam file incomplete?
next-gen sequencing written 14 days ago by rse • 70 • updated 7 days ago by Vijay Lakhujani ♦ 4.0k
3
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1
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870
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8 follow
1
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CNV / SV Filtration
genome next-gen sequencing written 2.0 years ago by rse • 70
0
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0
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93
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Merge fastq files
next-gen sequencing written 7 days ago by rse • 70
4
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2
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77
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2
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Identify neighboring SNPs located on individual reads
alignment snp sequencing written 8 days ago by jannik_donner • 10 • updated 7 days ago by Pierre Lindenbaum ♦ 119k
1
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132
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0
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Cancer Sample RNA Seq Analysis
assembly next-gen rna-seq sequencing written 9 days ago by komal • 0 • updated 8 days ago by ATpoint ♦ 15k
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2
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156
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In R or Python, How do I implement an allele sequence "autocomplete" tool given a dictionary of possible allele sequence matches?
R sequencing snp assembly python written 9 days ago by kristopherfernandez • 10 • updated 8 days ago by zx8754 ♦ 7.1k
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49
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1
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Bam file @RG read group information LB (The library from which the read has been sequenced)
alignment sequencing written 8 days ago by Sudhir Jadhao • 60
0
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1
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68
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1
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Peak caller for RIP-seq analysis - required or not?
rna-seq sequencing written 9 days ago by priya.dalvi • 0 • updated 9 days ago by colindaven • 1.2k
0
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0
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65
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DNA-Methylation downstream analysis using deepTOOLS or bedops
genome sequencing written 9 days ago by sc@791 • 20
2
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1
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107
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1
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align Falcon-unzip contigs to itself using minimap
assembly minimap falcon-unzip pacbio sequencing written 11 days ago by olechnwin • 0
12
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5 follow
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Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 18 months ago by Cyriac Kandoth ♦ 5.2k
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64
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lobSTR analysis report
sequencing written 10 days ago by rabiachohdary48 • 0 • updated 10 days ago by genomax ♦ 65k
2
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2
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2
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How to perform FPKM on raw reads in R
R fpkm rna-seq sequencing written 22 months ago by manish20072013 • 0 • updated 10 days ago by Ahmed Alhendi • 10
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Polygenic Risk Score analysis using PRSice
genome gwas next-gen snp sequencing written 11 days ago by sofie_carolina • 20
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