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<prev • 4,159 results • page 1 of 139 • next >
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how can i use python to align dna sequences with t-coffee algorithm??
t-coffee python alignment sequencing written 4 minutes ago by sallyzaki70 • 0 • updated 1 minute ago by WouterDeCoster ♦ 34k
1
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1
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128
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1
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Automating to convert multiple fastq files into one fastq file
snp sequencing written 2 days ago by zhou_1228 • 0 • updated 15 hours ago by Malcolm.Cook • 870
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7
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7
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Where can I find public Single Cell RNA-seq data?
rna-seq sequencing written 2.2 years ago by 309772486 • 50 • updated 1 day ago by Biostar ♦♦ 20
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1
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How much data and how many libraries do we need for de-novo assembly?
genome assembly next-gen sequencing written 1 day ago by ahmad mousavi • 310 • updated 1 day ago by Carambakaracho • 570
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How many samples needed for run GISTIC2 to get meaningful results
genome next-gen rna-seq sequencing written 1 day ago by qxiong1 • 0
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1
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WGS for mtDNA variation
mtdna sequencing snp assembly written 2.1 years ago by waqasnayab • 160 • updated 1 day ago by Jeremy Leipzig ♦ 18k
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3
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109
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5 follow
3
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Detection of mtDNA
genome mtdna next-gen tool sequencing written 2 days ago by gianvitop95 • 0 • updated 1 day ago by Jeremy Leipzig ♦ 18k
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2
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108
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2
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How to compare kallisto and stringtie output
stringtie next-gen kallisto rna-seq sequencing written 2 days ago by yusuf.zhc • 0 • updated 2 days ago by kristoffer.vittingseerup • 830
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1
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97
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1
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Paired-end flag for singleton
hi-c sequencing samtools paired-end sequencing written 3 days ago by docdot • 0 • updated 2 days ago by prasundutta87 • 260
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1
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160
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5 follow
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Split a sequence in a fastq file
sequence fastq next-gen sequencing written 3 days ago by ste.lu • 20 • updated 3 days ago by Pierre Lindenbaum ♦ 114k
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News: Genomic bioinformatics service provider
next-gen genome news chip-seq sequencing rna-seq written 4 days ago by Neha • 0 • updated 4 days ago by Vijay Lakhujani ♦ 3.2k
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Duplicated read names in Fastq file
next-gen sequencing written 3.4 years ago by abascalfederico • 1.0k • updated 4 days ago by Diedes • 0
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Split a large VCF into user defined regions
vcf vcftools sequencing written 2.1 years ago by zelia.worman • 0 • updated 5 days ago by zx8754 ♦ 5.7k
2
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1
answer
86
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1
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E coli Sequencing & Analysis
genome assembly alignment sequencing written 8 days ago by aw_gibbs • 0 • updated 5 days ago by rebeccarenberg • 20
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1
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62
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1
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QIIME 1.9, make_phylogeny.py: Tree tips not preserved from fasta input
sequencing alignment rna-seq qiime written 8 days ago by trichter • 0
2
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0
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735
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Diamond annotation versus Kallisto/Sleuth
R rna-seq blast sequencing written 19 months ago by BioBing • 100 • updated 6 days ago by zx8754 ♦ 5.7k
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Why is 0/0 homozygous reference call in VCF useful information?
vcf variant-calling sequencing written 6 days ago by lillian.thistlethwaite • 0 • updated 6 days ago by WouterDeCoster ♦ 34k
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2
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11 follow
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Forum: What would be the trend in next few years in NGS era?
bioinformatics ngs forum sequencing written 7 days ago by ahmad mousavi • 310
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Job: Cancer Biology Bioinformaticist
next-gen chip-seq job rna-seq sequencing written 6 weeks ago by joshuajmeeks • 10 • updated 6 days ago by reui879 • 0
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99
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SNP calling from BAM file
snp sequencing written 7 days ago by KXG • 0
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143
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How to extract complete data for specific SNPs (say about 10 of them)
sequencing snp genotyping written 8 days ago by tinyskinn • 0
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55
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Analysis DEGs by edgeR glm using R version 3.4.4
R rna-seq sequencing written 8 days ago by Little.G • 0
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85
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Can I combine the GBS data with Whole Genome Resequencing for GWAS analysis
snp sequencing written 9 days ago by gengyang12138 • 0
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103
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Reference database for shotgun metagenomics
assembly next-gen sequencing written 29 days ago by mrudhulaks • 0 • updated 10 days ago by Biostar ♦♦ 20
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Realign Aligned.sortedByCoord.out.bam to Aligned.toTranscriptome.out.bam for RSEM input
genome assembly alignment rna-seq sequencing written 10 days ago by mkvalluru • 0 • updated 10 days ago by WouterDeCoster ♦ 34k
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56
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Use Sequenza output to run GISTIC2
sequencing written 11 days ago by qxiong1 • 0 • updated 11 days ago by RamRS ♦ 19k
4
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1
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82
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1
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Error correction of long reads
nanopore pacbio sequencing written 15 days ago by IP • 500
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Ilumina V2 vs V3 for amplicon sequencing
illumina amplicon next-gen sequencing written 14 days ago by joelslade • 10
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Missing INS in IGV?
genome alignment sequencing written 14 days ago by timothy.tl.ng • 10
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1
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1
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Automating a SNP calling workflow
next-gen snp sequencing written 14 days ago by zhou_1228 • 0 • updated 13 days ago by msimmer92 • 40
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