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Trimming RNA-Seq Data
assembly next-gen rna-seq sequencing written 11 hours ago by williamsbrian5064 • 40 • updated 11 hours ago by genomax ♦ 46k
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Forum: How do you organize sequence data (FASTQs)?
forum rna-seq sequencing written 14 hours ago by Daniel E Cook • 180 • updated 12 hours ago by Eric Lim • 420
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Job: Open positions at the Center for Molecular Oncology, MSKCC, New York
cancer python job sequencing R genetics written 6 months ago by Cyriac Kandoth ♦ 4.9k
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85
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Defining transcript direction from sequencing
rna-seq sequencing written 1 day ago by MarVi • 0
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43
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what are gene ratio and bg ratio in differentially expressed gene enrichment analysis?
gene rna-seq sequencing written 1 day ago by tuf58502 • 0 • updated 22 hours ago by kristoffer.vittingseerup • 450
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91
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genomic analysis workflow for plants
assembly next-gen sequencing written 1 day ago by t.berragragui • 0 • updated 23 hours ago by colindaven • 600
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1
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77
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1
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SNP Calling of a single bacterial gene
gene sequence snp sequencing written 1 day ago by Mirza.Jawad • 0
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1
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84
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1
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PacBio amplicon sequencing
genome assembly next-gen sequencing written 3 days ago by williamsbrian5064 • 40 • updated 2 days ago by colindaven • 600
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104
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1
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Help using data.frame in R
genome R sequence gene sequencing written 2 days ago by Noob • 0 • updated 2 days ago by genomax ♦ 46k
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Forum: Sequence Finder Project - I want to hear from you
python forum sequencing gene ui sequence written 2 days ago by jonathan.earl.patterson • 0
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Changing BCF genome coordinates (Picard LiftOverVcf error)
genome software error sequencing written 3 days ago by wpierrick • 20
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RNAseq error while running sem-calculate-expression
software error rna-seq sequencing written 3 days ago by shuksi1984 • 10
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Bioinformatics Project this summer
gene genome next-gen rna-seq sequencing written 3 days ago by shruti.singh.4431 • 0
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DNA sequencing results -- How to get consensus sequence from forward and reverse strands?
sequencing written 3 days ago by ccctttaaaggg • 0
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162
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10X scRNA-seq sample sheet generation issue
10x fastq sequencing bcl written 14 days ago by nikitavlassenko • 0 • updated 3 days ago by genomax ♦ 46k
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How to simulate Sanger AB1 files
sanger sequencing ab1 validation written 3 days ago by gretchen.wilson • 10
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1
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64
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1
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plink: vcf to ped
plink snp sequencing written 3 days ago by bsmith030465 • 90 • updated 3 days ago by chrchang523 ♦ 3.1k
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105
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What file format is it?
proteomics mass spectrometry sequence sequencing written 3 days ago by fred.s.kremer • 60
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86
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bowtie 2 - source code requirement
gene alignment sequence sequencing written 3 days ago by deucy@646 • 0
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3
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Match read length and quality string length
fastq rna-seq sequencing written 22 months ago by Jason • 20 • updated 4 days ago by peterhuang1108 • 0
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Starrseq data how can I characterise reads that maps out of the targeted regions.
starrseq alignment mapping sequencing written 4 days ago by morovatunc • 360
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shotgun metagenomic data analysis
sequencing written 12 days ago by luyang1005 • 0 • updated 5 days ago by willnotburn • 20
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GATK current version downloading fails
software error gene next-gen sequencing written 5 days ago by shuksi1984 • 10 • updated 5 days ago by zhenyisong • 120
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87
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Where can I get the ab1 Peak Reporter tool
tool sequencing written 5 days ago by biograd2018 • 0 • updated 5 days ago by Istvan Albert ♦♦ 76k
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Analysing RNA-seq data and whole genome bisulfite seq data on same tissues (multi-read out sequencing data)
bisufite-seq next-gen rna-seq sequencing written 6 months ago by cjgunase • 20 • updated 6 days ago by davichen • 0
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345
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1
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Removing Duplicates for Variant calling when using genes as a reference?
gene next-gen snp sequencing written 6 months ago by DR • 10 • updated 7 days ago by Biostar ♦♦ 20
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74
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Prefetch command is not able to download sra file
software error next-gen sequence sequencing written 7 days ago by patanjal • 0 • updated 7 days ago by Carambakaracho • 110
4
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1
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141
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1
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Remove singletons from bam
next-gen sequencing written 12 days ago by banerjeeshayantan • 40 • updated 7 days ago by Ram ♦ 14k
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66
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How to compare coverage eveness of two whole genome sequencing runs of the same sample?
wgs library prep cnv sequencing written 7 days ago by xuang • 0
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GATK error while performing WES for the HG100 downloaded from 1000genomes
genome next-gen sequencing written 8 days ago by shuksi1984 • 10 • updated 8 days ago by Pierre Lindenbaum ♦ 106k
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