Showing: sequencingreset
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249
votes
11
answers
28k
views
172 follow
11
answers
253
votes
11
answers
148k
views
119 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 8.9 years ago by Biomed4.6k • updated 16 months ago by WouterDeCoster42k
231
votes
15
answers
63k
views
77 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.5 years ago by Biomed4.6k • updated 4.8 years ago by Barry40
98
votes
17
answers
33k
views
51 follow
17
answers
Gene Fusion Detection: Rna-Seq Data
fusion next-gen rna-seq sequencing written 7.5 years ago by KS360 • updated 11 months ago by Shixiang40
105
votes
8
answers
40k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.6 years ago by Matthieu430 • updated 3.7 years ago by alexisdereeper30
83
votes
6
answers
52k
views
48 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 5.5 years ago by krithika.gu260 • updated 17 months ago by Fred073060
160
votes
15
answers
42k
views
46 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 8.4 years ago by Panos1.7k • updated 5.3 years ago by bstrs0
40
votes
2
answers
15k
views
40 follow
2
answers
Tutorial: Sequencing Technology Review Papers
tutorial papers sequencing written 7.3 years ago by Istvan Albert ♦♦ 81k • updated 3.7 years ago by pengchy410
152
votes
11
answers
5.2k
views
37 follow
11
answers
Picking A Programming Language And Where To Begin
programming next-gen C subjective sequencing written 8.4 years ago by Travis2.8k • updated 7.9 years ago by Palani Kannan60
45
votes
6
answers
11k
views
37 follow
6
answers
58
votes
18
answers
21k
views
35 follow
18
answers
57
votes
6
answers
39k
views
32 follow
6
answers
Estimate Insert Size In Paired-End/Mate-Pair
next-gen paired alignment sequencing written 7.9 years ago by Ric160 • updated 7.9 years ago by Ketil4.0k
63
votes
8
answers
19k
views
31 follow
8
answers
96
votes
8
answers
26k
views
30 follow
8
answers
What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 9.7 years ago by Pierre Lindenbaum124k • updated 6.1 years ago by Biostar ♦♦ 20
125
votes
7
answers
131k
views
30 follow
7
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 9.7 years ago by Pierre Lindenbaum124k • updated 17 days ago by Renesh1.8k
94
votes
15
answers
32k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 9.3 years ago by User 1586280 • updated 18 months ago by endrebak800
58
votes
8
answers
20k
views
27 follow
8
answers
95
votes
5
answers
48k
views
27 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 8.9 years ago by Pierre Lindenbaum124k • updated 2.7 years ago by martin.triska110
65
votes
8
answers
27k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 9.6 years ago by brentp23k • updated 4.3 years ago by Malachi Griffith18k
62
votes
7
answers
16k
views
26 follow
7
answers
179
votes
16
answers
13k
views
25 follow
16
answers
I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 9.1 years ago by Pierre Lindenbaum124k • updated 6.4 years ago by sarahhunter600
61
votes
6
answers
9.0k
views
25 follow
6
answers
21
votes
5
answers
6.8k
views
25 follow
5
answers
42
votes
3
answers
15k
views
24 follow
3
answers
The Difference Between Directional And Nondirectional Sequencing
non rna sequencing written 7.9 years ago by Assa Yeroslaviz1.2k • updated 16 months ago by julianasrinjuli0
109
votes
5
answers
115k
views
23 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 9.4 years ago by Biomed4.6k • updated 6.1 years ago by Chris Miller21k
47
votes
7
answers
28k
views
23 follow
7
answers
How To Get Number Of Reads In Bam File Efficiently In Python?
python next-gen samtools sequencing written 9.4 years ago by User 9996800 • updated 14 months ago by Arindam Ghosh200
34
votes
6
answers
15k
views
23 follow
6
answers
Clustering Gene Expression For Time Course Rna-Seq Data
rna-seq clustering sequencing written 7.1 years ago by Abhi1.5k • updated 9 months ago by sabaghianamir7010
31
votes
2
answers
3.7k
views
23 follow
2
answers
59
votes
6
answers
50k
views
20 follow
6
answers
33
votes
2
answers
16k
views
19 follow
2
answers
Understanding ATAC-seq data
peak calling atac-seq sequencing written 2.9 years ago by Friederike5.2k • updated 2.9 years ago by Charles Plessy2.7k
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