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About the ERCC spike-in sequence reads quantification
genome gene next-gen rna-seq sequencing written 9 weeks ago by younglin113 • 10 • updated 1 day ago by Biostar ♦♦ 20
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75
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Cloning after PCR, then sequencing
cloning sequencing methylation pcr written 2 days ago by ognjen011 • 170
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1
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102
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1
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How to blast a paired end fastq file?
gene alignment sequence sequencing written 2 days ago by chillchik29 • 0 • updated 2 days ago by JC ♦ 7.8k
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4
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3.0k
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8 follow
4
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CONTRA for CNV detection. troubleshooting
genome software error next-gen cnv sequencing written 5.0 years ago by Kizuna • 760 • updated 3 days ago by lffu_0032 • 30
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1
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65
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1
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Question on patterns search in DNA sequences
genome sequence sequencing written 10 days ago by savella.417 • 0 • updated 3 days ago by max.rempel2 • 0
2
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92
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Unicycler - hybrid assembly failure
genome assembly next-gen software error sequencing written 3 days ago by piotr.majewski • 0 • updated 3 days ago by jrj.healey ♦ 12k
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1.3k
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Default sequencing keys and flow order
genome sequence alignment snp sequencing written 4.1 years ago by alok.helix • 80 • updated 3 days ago by Biostar ♦♦ 20
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70
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Job: Data Processing Engineer
assembly genome job snp sequencing alignment written 3 days ago by phillippa.wall • 0
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1
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106
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1
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Trimmomatic output file Issue
rna-seq sequencing written 5 days ago by akh22 • 10
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115
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1
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How many storage needs for Whole genome sequencing?
bioinformatics whole genome sequencing sequencing written 4 days ago by star • 140 • updated 4 days ago by ATpoint ♦ 17k
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60
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Test Freebayes on sample files
variant calling freebayes sequencing written 5 days ago by Bella_p • 50
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1
answer
73
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1
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intersection for several file
script rna-seq sequencing written 5 days ago by mxlsherry1992 • 10 • updated 5 days ago by manuel.belmadani • 800
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1
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4.0k
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1
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From genotype raw data .idat to PLINK files
R genotype sequencing written 5.1 years ago by Armand • 20 • updated 5 days ago by eva.gradovich • 0
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1
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73
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1
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unequal fastq files
raw data rna-seq fastq files sequencing written 5 days ago by sagardesai91 • 40 • updated 5 days ago by ATpoint ♦ 17k
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91
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1
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Benchmarking small variant calls: TP, FP, TN, FN
genome snp sequencing written 6 days ago by Tails • 30 • updated 6 days ago by WouterDeCoster ♦ 39k
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1
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107
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1
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low mapping rate with bowtie2 and BWA, but not blast
alignment rna-seq sequencing written 6 days ago by zhangdengwei • 30 • updated 6 days ago by h.mon ♦ 25k
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1
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107
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1
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Orthogroups.csv file for orthofinder
assembly alignment rna-seq sequencing written 8 days ago by mxlsherry1992 • 10 • updated 6 days ago by SMK • 430
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79
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Assembly finished but output contig file is empty
assembly spades sequencing written 6 days ago by tchow5 • 0
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83
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How to build an imputation reference panel from a fasta file of many samples
assembly alignment snp sequencing written 8 days ago by moxu • 440
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2
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143
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7 follow
2
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Testing Illumina reads for contamination
genome sequencing written 9 days ago by mertdogan • 10 • updated 8 days ago by RamRS ♦ 21k
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88
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what is de novo sequencing?
sequencing written 9 days ago by cjerry541224 • 0
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81
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Trinity assembly file
assembly rna-seq sequencing written 9 days ago by mxlsherry1992 • 10
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8 follow
1
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CNV / SV Filtration
genome next-gen sequencing written 2.1 years ago by rse • 90 • updated 9 days ago by Biostar ♦♦ 20
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2
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1.5k
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2
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RNa seq data: GO annotation
gene rna-seq sequencing written 3.0 years ago by hnp21 • 40 • updated 9 days ago by RamRS ♦ 21k
4
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1
answer
91
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1
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filtering SNPs by samples?
bcftools snp sequencing written 9 days ago by jingjin2203 • 30 • updated 9 days ago by guillaume.rbt • 560
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49
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PAGA plot question
software error sequencing written 9 days ago by shoujun.gu • 0
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2
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Tool to separate human and mouse rna seq reads
next-gen rna-seq sequencing written 4.0 years ago by Ron • 930 • updated 9 days ago by giovannaventola3es9 • 20
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76
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plasmid recovery from hybrid assembly
genome assembly next-gen sequencing written 9 days ago by piotr.majewski • 0
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Why are there multiple bax/fastq files associated with my PacBio run?
genome wgs forum pacbio sequencing written 10 days ago by nickvpinkham • 0 • updated 10 days ago by Asaf ♦ 5.6k
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7 follow
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How to calculate "Tissue specificity score" using JSD
python next-gen rna-seq sequencing written 2.1 years ago by Ashley • 50 • updated 10 days ago by elsoja • 30
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