Showing: sequencingreset
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249
votes
11
answers
28k
views
172 follow
11
answers
231
votes
15
answers
63k
views
77 follow
15
answers
What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.5 years ago by Biomed4.6k • updated 4.8 years ago by Barry40
253
votes
11
answers
148k
views
119 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 8.9 years ago by Biomed4.6k • updated 16 months ago by WouterDeCoster42k
105
votes
8
answers
40k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.6 years ago by Matthieu430 • updated 3.7 years ago by alexisdereeper30
179
votes
16
answers
13k
views
25 follow
16
answers
I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 9.1 years ago by Pierre Lindenbaum124k • updated 6.4 years ago by sarahhunter600
95
votes
5
answers
48k
views
27 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 8.9 years ago by Pierre Lindenbaum124k • updated 2.7 years ago by martin.triska110
40
votes
2
answers
15k
views
40 follow
2
answers
Tutorial: Sequencing Technology Review Papers
tutorial papers sequencing written 7.3 years ago by Istvan Albert ♦♦ 81k • updated 3.7 years ago by pengchy410
160
votes
15
answers
42k
views
46 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 8.4 years ago by Panos1.7k • updated 5.3 years ago by bstrs0
96
votes
8
answers
26k
views
30 follow
8
answers
What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 9.7 years ago by Pierre Lindenbaum124k • updated 6.1 years ago by Biostar ♦♦ 20
125
votes
7
answers
131k
views
30 follow
7
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 9.7 years ago by Pierre Lindenbaum124k • updated 17 days ago by Renesh1.8k
94
votes
15
answers
32k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 9.3 years ago by User 1586280 • updated 18 months ago by endrebak800
65
votes
8
answers
27k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 9.6 years ago by brentp23k • updated 4.3 years ago by Malachi Griffith18k
61
votes
6
answers
9.0k
views
25 follow
6
answers
57
votes
4
answers
3.9k
views
9 follow
4
answers
109
votes
5
answers
115k
views
23 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 9.4 years ago by Biomed4.6k • updated 6.1 years ago by Chris Miller21k
37
votes
2
answers
3.1k
views
10 follow
2
answers
51
votes
6
answers
24k
views
17 follow
6
answers
What Metrics Are Best To Describe The "Coverage" Of Rna-Seq Data?
sequencing rpkm next-gen rna data written 9.1 years ago by Bio_X2Y3.7k • updated 3.7 years ago by Biostar ♦♦ 20
62
votes
7
answers
16k
views
26 follow
7
answers
45
votes
5
answers
6.0k
views
7 follow
5
answers
46
votes
4
answers
8.7k
views
10 follow
4
answers
How To Produce Simulated 'Synthetic' Sequences
model simulation next-gen sequencing written 9.5 years ago by Stefano Berri4.1k • updated 9.5 years ago by Jonathan Manning640
58
votes
18
answers
21k
views
35 follow
18
answers
83
votes
6
answers
52k
views
48 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 5.5 years ago by krithika.gu260 • updated 17 months ago by Fred073060
31
votes
2
answers
3.7k
views
23 follow
2
answers
51
votes
3
answers
3.5k
views
7 follow
3
answers
70
votes
5
answers
31k
views
17 follow
5
answers
About Paired-End Sequencing
short duplicates next-gen tool sequencing written 9.6 years ago by Pierre Lindenbaum124k • updated 8.7 years ago by Ketil4.0k
60
votes
6
answers
6.3k
views
17 follow
6
answers
Figure Of Diminishing Sequencing Costs
sequencing next-gen cost written 9.1 years ago by Eric Normandeau10k • updated 5.0 years ago by Obi Griffith18k
63
votes
8
answers
19k
views
31 follow
8
answers
57
votes
6
answers
39k
views
32 follow
6
answers
Estimate Insert Size In Paired-End/Mate-Pair
next-gen paired alignment sequencing written 7.9 years ago by Ric160 • updated 7.9 years ago by Ketil4.0k
45
votes
6
answers
11k
views
37 follow
6
answers
33
votes
2
answers
16k
views
19 follow
2
answers
Understanding ATAC-seq data
peak calling atac-seq sequencing written 2.9 years ago by Friederike5.2k • updated 2.9 years ago by Charles Plessy2.7k
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