Showing: sequencingreset
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242
votes
11
answers
25k
views
166 follow
11
answers
231
votes
15
answers
62k
views
77 follow
15
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What Is The Best Pipeline For Human Whole Exome Sequencing?
exome illumina next-gen human sequencing written 9.0 years ago by Biomed4.5k • updated 4.3 years ago by Barry40
240
votes
11
answers
138k
views
113 follow
11
answers
Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 8.3 years ago by Biomed4.5k • updated 9 months ago by WouterDeCoster39k
105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.0 years ago by Matthieu430 • updated 3.2 years ago by alexisdereeper30
179
votes
16
answers
13k
views
25 follow
16
answers
I Am Preparing A Course On Ngs: Any Suggestion ?
next-gen galaxy sequencing written 8.6 years ago by Pierre Lindenbaum120k • updated 5.8 years ago by sarahhunter600
93
votes
5
answers
46k
views
27 follow
5
answers
Is My Bam File Sorted ?
sequencing next-gen bam sort written 8.3 years ago by Pierre Lindenbaum120k • updated 2.1 years ago by martin.triska110
39
votes
2
answers
14k
views
40 follow
2
answers
Tutorial: Sequencing Technology Review Papers
tutorial papers sequencing written 6.7 years ago by Istvan Albert ♦♦ 80k • updated 3.1 years ago by pengchy410
96
votes
8
answers
25k
views
30 follow
8
answers
What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 5.6 years ago by Biostar ♦♦ 20
125
votes
6
answers
126k
views
29 follow
6
answers
What Is The Sequencing 'Depth' ?
next-gen sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 2.7 years ago by jokipokemon00010
158
votes
15
answers
40k
views
46 follow
15
answers
How To Efficiently Parse A Huge Fastq File?
sequencing fastq next-gen parsing written 7.9 years ago by Panos1.7k • updated 4.7 years ago by bstrs0
94
votes
15
answers
31k
views
28 follow
15
answers
What Is The Quickest Algorithm For Range Overlap?
python database next-gen alignment sequencing written 8.8 years ago by User 1586280 • updated 12 months ago by endrebak760
65
votes
8
answers
26k
views
26 follow
8
answers
Rna-Seq Pipeline
rna next-gen pipeline rna-seq sequencing written 9.0 years ago by brentp23k • updated 3.7 years ago by Malachi Griffith17k
61
votes
6
answers
8.8k
views
25 follow
6
answers
57
votes
4
answers
3.7k
views
9 follow
4
answers
99
votes
5
answers
108k
views
15 follow
5
answers
How Can I Convert Bam To Sam?
sequencing next-gen sam conversion bam written 8.9 years ago by Biomed4.5k • updated 5.5 years ago by Chris Miller20k
37
votes
2
answers
3.0k
views
10 follow
2
answers
51
votes
6
answers
23k
views
17 follow
6
answers
What Metrics Are Best To Describe The "Coverage" Of Rna-Seq Data?
sequencing rpkm next-gen rna data written 8.5 years ago by Bio_X2Y3.7k • updated 3.2 years ago by Biostar ♦♦ 20
61
votes
7
answers
15k
views
25 follow
7
answers
45
votes
5
answers
5.8k
views
7 follow
5
answers
58
votes
18
answers
20k
views
35 follow
18
answers
81
votes
6
answers
46k
views
48 follow
6
answers
How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 4.9 years ago by krithika.gu250 • updated 10 months ago by Fred073060
31
votes
2
answers
3.4k
views
23 follow
2
answers
45
votes
4
answers
8.3k
views
10 follow
4
answers
How To Produce Simulated 'Synthetic' Sequences
model simulation next-gen sequencing written 8.9 years ago by Stefano Berri4.1k • updated 8.9 years ago by Jonathan Manning620
51
votes
3
answers
3.4k
views
7 follow
3
answers
70
votes
5
answers
31k
views
17 follow
5
answers
About Paired-End Sequencing
short duplicates next-gen tool sequencing written 9.1 years ago by Pierre Lindenbaum120k • updated 8.1 years ago by Ketil3.9k
60
votes
6
answers
6.0k
views
17 follow
6
answers
Figure Of Diminishing Sequencing Costs
sequencing next-gen cost written 8.6 years ago by Eric Normandeau10k • updated 4.4 years ago by Obi Griffith17k
63
votes
8
answers
19k
views
31 follow
8
answers
45
votes
6
answers
9.8k
views
37 follow
6
answers
47
votes
7
answers
27k
views
23 follow
7
answers
How To Get Number Of Reads In Bam File Efficiently In Python?
python next-gen samtools sequencing written 8.8 years ago by User 9996800 • updated 8 months ago by Arindam Ghosh160
20
votes
2
answers
5.3k
views
5 follow
2
answers
Evaluation Of High Throughput Sequencing Error Rates ?
next-gen papers error sequencing written 8.8 years ago by Casey Bergman18k • updated 5.2 years ago by Biostar ♦♦ 20
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