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News: Ensembl reduced functionality: 10th March-16th April 2020

ensembl news vep service blat written 11 months ago by Ben_Ensembl • 1.6k

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News: Ensembl reduced functionality - Monday 20th January

ensembl news service written 12 months ago by Ben_Ensembl • 1.6k

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News: Ensembl reduced functionality, early March

ensembl news service written 12 months ago by Emily_Ensembl ♦ 21k

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Is there any open-source Illumina bacterial genome mapping and annotation website?

software annotation open source mapping service written 24 months ago by bioinf_ukraine • 0 • updated 24 months ago by h.mon ♦ 32k

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Forum: What makes a good bionformatics prediction service from the point of user experience?

server good forum prediction service written 3.2 years ago by aquaq • 30

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Recent Replies

C: Difficulty installing fastx_toolkit on MAC by joselatran • 0
Why not use it with paired-end data? Do you have a reference to explain that?
C: Expiration time of infinium snpchip array of Illumina by Kevin Blighe ♦ 69k
How old are the chips that you have? Illumina may only offer support in the time prior to expiry,...
C: I would like to add gene names to a volcano plot obtained from DEseq2 by Kevin Blighe ♦ 69k
I would change its name to `""` (empty string) in the input variable
A: How many cells are represented in a sample going through NGS by Ventrilocus • 80
It is easy to compute. You just need the ng of DNA input in the NGS experiment. For example, assu...
C: How many cells are represented in a sample going through NGS by ATpoint ♦ 44k
This is not really bioinformatics so it likely will get closed. The answer is "it depends" and th...
A: Has someone experience with the KOBAS (v. 3) standalone enrichment software? by CHMpositive • 0
Hi, guys. I suggest that you can install KOBAS docker image to run analyses. I also met this erro...
A: scale free topology in WGCNA by andres.firrincieli • 1.1k
Hello, 153 samples and power of 18 for an `unsigned` network is too high. There is a very nice e...
C: I would like to add gene names to a volcano plot obtained from DEseq2 by krushnach80 • 860
if i dont want to label the gene name in the plot what is the option ?
C: Finding Promoters in a genome by ccc • 0
Thank you for the pointer! I guess it makes sense to look for such a thing now that you say it, ...
C: blast alignemnt query coverage by Karma • 300
If that is the case, can you remove those `unwanted comments` from the sections
C: cellranger count error "Your reference does not contain the expected files, or t by yjk122123 • 0
It looks to me that you downloaed the VDJ reference instead of the reference for GEX data? Since ...
C: allele specific expression at gene level by qliang2016 • 0
Thanks. I read the paper and actually, it also did not try to avoid multiple counting. Also it se...

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