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using distinct versions of SEURAT on a SLURM cluster
seurat scrnaseq written 9 weeks ago by Bogdan970 • updated 21 hours ago by Giovanni M Dall'Olio27k
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How to understand the multi-sample processing of Seurat?
rna-seq scrnaseq seurat written 4 weeks ago by xiaoguang10 • updated 4 days ago by Friederike5.4k
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scRNA-seq, Seurat: correlation analysis of two replicates
scrna seurat written 8 weeks ago by Gregor Rot440 • updated 4 days ago by Friederike5.4k
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Skipping Clustering in Seurat
single-cell seurat clustering rna-seq written 17 days ago by suvratha40 • updated 16 days ago by jared.andrews075.3k
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Cluster using known marker genes (Seurat)
single cell rnaseq seurat rstudio rnaset written 4 weeks ago by V200 • updated 4 weeks ago by Arup Ghosh2.3k
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Getting the cells from the clusters Seurat has found
R rna-seq seurat single cell written 11 weeks ago by suvratha40 • updated 7 weeks ago by Evan20
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Extracting cells only from one condition (Seurat)
single cell rnaseq R seurat rna-seq written 7 weeks ago by V200 • updated 7 weeks ago by jared.andrews075.3k
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Error: unexpected '}' in " }" in R codes of Seurat
R seurat written 8 weeks ago by vHelmholtz20 • updated 8 weeks ago by noorpratap.singh290
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Moving data from Seurat to ScanPy
single-cell R seurat scanpy python written 9 weeks ago by rmf920 • updated 9 weeks ago by khorms50
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Seurat heatmap across conditions
single-cell rnaseq seurat written 10 weeks ago by V200 • updated 10 weeks ago by Arup Ghosh2.3k
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Convert a Seurat object to .h5ad file
single-cell R rna-seq seurat scanpy written 7 months ago by gaelgarcia05200 • updated 12 weeks ago by mmfiruleva10
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How to scale data for scater plotHeatmap function similar to Seurat?
scater scrnaseq seurat heatmap written 5 months ago by TJ40 • updated 3 months ago by Biostar ♦♦ 20
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Seurat QC Metrics For Each Cluster and Cluster Composition
single cell seurat written 3 months ago by hamindigoblue0 • updated 3 months ago by igor9.8k
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Summing data from 3 different parts of an R object at once
R scrna seq seurat written 5 months ago by cook.67510 • updated 3 months ago by Biostar ♦♦ 20
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FindAllMarkers pct1 and pct2
rna-seq seurat written 4 months ago by Morris_Chair170 • updated 4 months ago by jared.andrews075.3k
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Examination of data matrix from CITE-seq-counts
rna-seq seurat written 5 months ago by cook.67510 • updated 4 months ago by Biostar ♦♦ 20
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