Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: seurat • reset
or   Classic search
<prev • 73 results • page 1 of 3 • next >
1
vote
0
answers
66
views
0
answers
Summing data from 3 different parts of an R object at once
R scrna seq seurat written 1 day ago by cook.675 • 10
1
vote
1
answer
93
views
1
answer
Error in installing Seurat
seurat written 4 days ago by Joshua Klionsky • 10
2
votes
1
answer
58
views
1
answer
Harmony batch correction vs. regressing out donor effect in Seurat
scrna-seq harmony seurat rna-seq batch correction written 7 days ago by Lucy • 20 • updated 7 days ago by jared.andrews07 • 3.4k
0
votes
0
answers
109
views
0
answers
Examination of data matrix from CITE-seq-counts
rna-seq seurat written 10 days ago by cook.675 • 10
0
votes
1
answer
91
views
1
answer
How to delete Assay from Seurat object?
seurat rna-seq written 10 days ago by cook.675 • 10 • updated 10 days ago by jared.andrews07 • 3.4k
0
votes
0
answers
99
views
0
answers
Importing EBI Single Cell Expression Atlas Data into Seurat
ebi rna-seq seurat written 15 days ago by mikhael.manurung • 0
0
votes
0
answers
94
views
0
answers
[Seurat] Looking into differential gene expression between specific groups of two different clusters
scrna-seq R seurat written 15 days ago by niklas.k.bruse • 0
1
vote
0
answers
132
views
0
answers
bulk analysis by seurat
gene name seurat rna-seq written 21 days ago by ayatrience • 0
1
vote
1
answer
145
views
1
answer
vector memory exhausted running dist() on a single ADT dataset
seurat rna-seq written 23 days ago by cook.675 • 10 • updated 23 days ago by Jean-Karim Heriche ♦ 21k
1
vote
2
answers
174
views
2
answers
Seurat DefaultAssay "integrated" or "RNA" with integrated dataset????
seurat written 24 days ago by cook.675 • 10 • updated 24 days ago by shoujun.gu • 210
3
votes
2
answers
149
views
2
answers
Need help with simple FOR loop
seurat rna-seq written 28 days ago by cook.675 • 10 • updated 27 days ago by Prakash • 1.6k
0
votes
0
answers
61
views
0
answers
Plot features on tsne plot with high pLi scores
pli genes tsne rna-seq seurat written 5 weeks ago by asmariyaz23 • 10 • updated 27 days ago by Biostar ♦♦ 20
0
votes
2
answers
135
views
2
answers
Looking for differential gene expression between treatment, within a specific cluster (seurat)
seurat written 28 days ago by cook.675 • 10
0
votes
1
answer
119
views
1
answer
How to remove entire rows from seurat object based on cellhash read
seurat written 28 days ago by cook.675 • 10
1
vote
2
answers
183
views
5 follow
2
answers
Pull number of cells in cluster from seurat object
rna-seq seurat written 4 weeks ago by cook.675 • 10
2
votes
1
answer
212
views
1
answer
Single cell clutering after regressing out cell cycle effect using seurat
scrna-seq seurat clustering written 6 weeks ago by piyushjo • 170 • updated 5 weeks ago by Haci • 120
2
votes
1
answer
116
views
1
answer
Expression plots of some genes of interest from scRNA data for each library
scrna-seq seurat written 6 weeks ago by entropy • 30
4
votes
1
answer
178
views
1
answer
scRNA-seq analysis of two data-sets
scrna-seq seurat written 6 weeks ago by piyushjo • 170 • updated 6 weeks ago by jared.andrews07 • 3.4k
2
votes
2
answers
236
views
2
answers
Convert a Seurat object to .h5ad file
single-cell R rna-seq seurat scanpy written 7 weeks ago by gaelgarcia05 • 190 • updated 6 weeks ago by shoujun.gu • 210
0
votes
0
answers
200
views
0
answers
How to use WhichCells Function to label clusters
R seurat written 9 weeks ago by world • 0
0
votes
0
answers
340
views
0
answers
How to use monocle to import a loom file?
R monocle rna-seq seurat written 7 months ago by yuhongruoyi • 10 • updated 9 weeks ago by Biostar ♦♦ 20
0
votes
2
answers
302
views
2
answers
Label Clusters in Seurat
R seurat rna-seq written 9 weeks ago by planetearth • 0 • updated 9 weeks ago by ApoorvaB • 230
0
votes
0
answers
174
views
0
answers
Seurat FeaturePlot: highlight only cells coexpressing several genes
rna-seq single cell seurat written 9 weeks ago by yassin • 0
1
vote
1
answer
229
views
1
answer
How to display TCR data in tsne space via seurat object
R seurat written 10 weeks ago by jennifer.bridge8 • 0 • updated 10 weeks ago by jared.andrews07 • 3.4k
1
vote
0
answers
456
views
0
answers
Fixing batch effect with seurat integrate
single-cell seurat scrna.seq written 3 months ago by rmf • 730
1
vote
1
answer
417
views
1
answer
Merging Seurat objects together and gene alignment
single-cell seurat rna-seq written 3 months ago by amjass • 0
0
votes
0
answers
168
views
0
answers
Error in FindTransferAnchors Seurat
scrna-seq seurat written 3 months ago by massonix • 0
0
votes
1
answer
232
views
1
answer
Seurat cluster is split and appears in 2 different areas on the tsne plot
R tsne seurat cluster_analysis written 3 months ago by asmariyaz23 • 10
9
votes
2
answers
1.1k
views
2
answers
Using SCTransform with Seurat for multi-sample RNA-seq data
R sctransform rna-seq seurat written 3 months ago by steveh • 20 • updated 3 months ago by igor ♦ 8.6k
4
votes
0
answers
309
views
0
answers
Creating SingleCellExperiment class from scratch !
bioconductor monocle scrna seurat written 3 months ago by lokraj2003 • 70
<prev • 73 results • page 1 of 3 • next >
Recent Votes
Recent Locations • All »
  • United States, 4 minutes ago
  • UCSC Genomics Institute, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1028 users visited in the last hour