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how to make LEGEND file for Reference Panels?
legend file shapeit imputation pre-phasing written 6 months ago by nayeona.hi50 • updated 6 months ago by Kevin Blighe69k
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Phasing with SHAPEIT
shapeit impute plink snp written 13 months ago by melania 2282100 • updated 10 months ago by officialoxybreath0
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Is it acceptable to use ShapeIT for parasite genomes?
shapeit impute2 haplotype phasing beagle written 18 months ago by nataliagru160 • updated 10 months ago by Biostar ♦♦ 20
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Genetic map for chromosome X that shows recombination rates?
shapeit phasing written 11 months ago by curious470 • updated 11 months ago by Kevin Blighe69k
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Merge phased files from ShapeIT
shapeit phasing written 18 months ago by nataliagru160 • updated 18 months ago by Charles Warden8.0k
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extractPIRs is throwing an ERROR
shapeit extractpirs phasing written 2.8 years ago by nkausthu30 • updated 2.8 years ago by GenoMax95k
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error when using shapeit2 phasing with vcf from GATK
vcf shapeit phasing written 3.5 years ago by Loveinheaven0 • updated 3.5 years ago by h.mon32k
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imputation only choose one population as reference panel
shapeit impute2 population gwas written 3.9 years ago by Peter Chung120 • updated 3.7 years ago by ShirleyDai40
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Haplotype phasing for non-human model organism
shapeit impute2 haplotype phasing beagle written 4.7 years ago by kirannbishwa011.3k • updated 4.7 years ago by Zev.Kronenberg11k
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SHAPEIT allele encoding
shapeit plink phasing written 5.2 years ago by andreagarcia87160
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