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Can BLASTn be used to calculate sequence similarity?
similarity blastn identity written 7 weeks ago by jamie.pike • 20 • updated 7 weeks ago by lieven.sterck ♦ 7.9k
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Similarity between DNA strings of two different classes
similarity sequencing written 9 weeks ago by banerjeeshayantan • 170
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How to measure the similarity of operons from two species?
similarity bacteria operon written 11 weeks ago by mrj • 20
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How to select pairs to have a significant sample for similarity
similarity sampling pairs gene ontology written 8 months ago by Damianos P. Melidis • 10 • updated 7 months ago by Biostar ♦♦ 20
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254
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Comparing distributions of amino acids
similarity amino acid distribution written 10 months ago by williamoberg • 0
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HMMER vs OrthoMCL vs Blast: When to use what for finding gene groups
similarity gene families blast orthomcl written 10 months ago by Ace • 70 • updated 10 months ago by Mensur Dlakic • 5.7k
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How To Plot The The Quality Of Conservation In A Multiple Sequence Alignment
similarity msa plot written 6.9 years ago by figo • 200 • updated 10 months ago by Biostar ♦♦ 20
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8 follow
4
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Similarity between two FASTA files
similarity distance written 23 months ago by rmf • 940 • updated 13 months ago by Biostar ♦♦ 20
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Microarray Sample Similarity
similarity correlation microarray written 6.5 years ago by Anomilie • 0 • updated 14 months ago by Morteza Razavi • 0
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4
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4.0k
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Make matrix of protein pairwise identities/similarities from multiple protein sequences
pairwise similarity protein identity matrix written 2.3 years ago by al-ash • 140
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identity, positivity and similarity in blastp results
similarity blastp blast written 23 months ago by utsafar • 40
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441
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Formal definition of protein sequence similarity
similarity sequence alignment written 2.1 years ago by backpropaganda • 0
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537
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Compare nucleotides across aligned sequences
identity similarity sequence biopython alignment written 2.1 years ago by brimaloney • 0 • updated 2.1 years ago by zx8754 ♦ 9.3k
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758
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Using BLAST to calculate all-pair sequence similarity score
similarity protein sequence sequence blast written 2.2 years ago by convalescence21 • 0
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709
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Making sublist of 26 gene lists
R clustering similarity written 2.3 years ago by A • 3.8k
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Phylogenetic Tree Comparison
similarity phylogenetics graphs written 8.4 years ago by Mehdi • 10 • updated 2.3 years ago by Biostar ♦♦ 20
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Dissimilarity measure for computing similarity between categorical variables in R
similarity R clustering categorical features written 2.3 years ago by svlachavas • 680
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7 follow
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A Rank-Weighted Similarity Score
similarity written 7.4 years ago by a3cel2 • 50 • updated 2.7 years ago by Biostar ♦♦ 20
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2
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How to calculate GOsimilarity between different species
similarity geneontology comparativegenomic R written 3.6 years ago by teresa.noviello89 • 0 • updated 3.1 years ago by e.rempel • 890
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Sequence similarity scores between two sets of genes from different genomes
genome similarity sequence alignment written 3.3 years ago by avaneesh.t • 20 • updated 3.3 years ago by genebow • 160
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989
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Strange BLAST output
similarity sequence blast written 3.7 years ago by Prasad • 1.6k
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6 follow
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Blast: Homology Or Similarity?
similarity homology blast written 7.8 years ago by Whetting • 1.5k • updated 4.0 years ago by natasha.sernova • 3.7k
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Are there any software for the alignment-free bacterial whole genome sequence similarity search and comparison?
vcf wgs alignment similarity sequencing written 4.1 years ago by hrenchert747 • 50 • updated 4.1 years ago by kloetzl • 1.1k
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similarity with protein sequence using FASTA
fasta similarity sequence proteins written 4.1 years ago by lol • 20
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Pairwise Gene Sequence Similarity Of All Human Genes
genome similarity blast human written 6.4 years ago by ewre • 220 • updated 4.3 years ago by Biostar ♦♦ 20
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887
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disease disease similarity/correlation
similarities similarity disease written 4.3 years ago by GD • 30 • updated 4.3 years ago by Shicheng Guo • 8.2k
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Database of genes with manually curated/fixed sequences?
similarity gene prediction homology database written 4.8 years ago by Yannick Wurm • 2.3k • updated 4.8 years ago by a.zielezinski ♦ 9.2k
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Similarity matrix calculation of a manual sequence alignment
similarity score sequence manual matrix written 4.9 years ago by sriosazu • 0
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6.2k
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9 follow
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Assessing Quality And Accuracy Of De Novo Genome Assembly
assembly quality genome similarity contigs blast written 6.7 years ago by a81526a • 60 • updated 5.2 years ago by h.mon ♦ 30k
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Calculate pair-wise dissimilarity of DNA sequences in Python
python dna sequence alignment similarity written 5.2 years ago by songzewei • 10
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