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Job: Staff scientist in bioinformatics. KAUST Bioscience Core Lab.
long read ngs method development job single cell written 4 days ago by YF • 10
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Align two single cell experiments
R job single cell written 12 days ago by elb • 160 • updated 12 days ago by Michael Dondrup ♦ 45k
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 10 weeks ago by sonpham • 550
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Single Cell RNAseq Imputation in Seurat
imputation rna-seq single cell written 11 weeks ago by bioinformatics.cancer • 180 • updated 24 days ago by kristoffer.vittingseerup • 1000
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Seurat Cell Cycle Phase Assignments
rna-seq cell cycle single cell seurat written 26 days ago by ianmw • 30 • updated 25 days ago by kristoffer.vittingseerup • 1000
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HUGO and Ensembl ids
ensembl hugo rna-seq single cell written 7 weeks ago by rsafavi • 40 • updated 27 days ago by EagleEye ♦ 6.0k
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Tutorial: Resources for flow cytometry bioinformatics
flow cytometry tutorial single cell written 4.7 years ago by Ahill • 1.3k
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Single Cell Sequencing Quality
bedtools samtools single cell written 10 weeks ago by hshah • 20 • updated 10 weeks ago by RamRS ♦ 19k
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Is there any way to infer percentage from the branches in trajectories plotted in Monocle?
single-cell R monocle single cell trajectory written 12 weeks ago by Batu • 110
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Peak call? or Just convert to bedfile by bedtools bamtobed? to generate the accessibility matrix of single-end single cell ATAC-seq
atac-seq single cell written 5 months ago by soya • 0 • updated 4 months ago by Devon Ryan ♦ 86k
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10X based Single cell sequencing for comparing two different disease states
single cell rna-seq written 5 months ago by halo22 • 110 • updated 5 months ago by igor ♦ 7.1k
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plotting the expression profiles of different conditions in same plot
R single cell clustering heatmap written 6 months ago by Za • 120 • updated 5 months ago by Biostar ♦♦ 20
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QC before single cell RNA seq?
qc rna-seq single cell written 5 months ago by jevanveen • 20
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Single cell RNA sequencing Seurat and Monocle
seurat cell trajectory rna-seq single cell monocle written 7 months ago by bioinformatics.cancer • 180 • updated 5 months ago by dppb05 • 70
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how to judge the 10X genomics single cell data quality
single cell written 6 months ago by biologo • 10
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errors in newCellDataSet Monocle function
single cell rna-seq written 7 months ago by jonessara770 • 130 • updated 6 months ago by Batu • 110
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Differential Expression Analysis with monocle and batch effect correction
rna-seq single cell batch effect written 6 months ago by Poorya Parvizi • 40 • updated 6 months ago by Kevin Blighe ♦ 33k
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Job: Post-doc positions on non-coding RNAs in neurological diseases at RIKEN Yokohama Japan
crispr gwas job single cell lncrna written 7 months ago by chungchau.hon • 10
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Storing a gene expression matrix in a matrix.mtx
software error single cell written 7 months ago by Za • 120 • updated 7 months ago by jbalberge • 80
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How to unique bwa mem reads?
unique reads bwa single cell atac-seq written 7 months ago by niu.shengyong • 30
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Extract, combine substring and concatenate in the beginning of the same row
atac barcode string single cell written 7 months ago by niu.shengyong • 30 • updated 7 months ago by Alex Reynolds ♦ 26k
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Comparing Different Single Cell Datasets
de compare rna-seq single cell written 7 months ago by sallehl • 0
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Open source alternatives to SureCell RNA Single-Cell App in Basespace?
illumina sure cell single cell ddseq rna-seq written 8 months ago by greener • 10 • updated 8 months ago by allthebases • 0
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Single Cell RNA-seq Mitochondrial Gene Expression
mitochondrial expression rna-seq single cell written 18 months ago by bioinformatics.cancer • 180 • updated 8 months ago by Friederike • 2.3k
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single-cell RNA-seq power analysis
power analysis rna-seq single cell written 17 months ago by niu.shengyong • 30 • updated 9 months ago by Biostar ♦♦ 20
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Clustering Cells using known marker genes (Single cell RNAseq)
rnaseq single cell written 17 months ago by V • 100 • updated 10 months ago by PR • 10
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Job: MS/PhD Position: Computational Systems Biology, The University of Memphis
systems biology stochastic modeling job single cell written 10 months ago by bjdaigle • 10
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What is the actual cause of excessive zeroes in single cell RNA-seq data? Is it PCR?
modelling rna-seq single cell pcr written 13 months ago by cerny.m • 30
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Job: Cancer Computational Genomics/Bioinformaticist Position - Stanford
wgs next-gen rna-seq single cell job written 14 months ago by christina.curtis • 10
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Tool: UMI-Tools 0.5, now with tools for cell barcoded scRNA-seq
umi rna-seq single cell tool written 15 months ago by i.sudbery • 2.8k
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