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<prev • 54 results • page 1 of 2 • next >
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Normalizing using Seurat with large numbers of samples
scrna-seq R single cell written 3 months ago by Kristin Muench • 410
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Demultiplexing single cell QIAseq UPX 3 Transcriptome Kits fastq files
single cell demultiplexing written 21 days ago by user31888 • 40
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Monocle Trajectories Reversed - how best to correct?
R monocle single cell rna-seq written 28 days ago by eoindosullivan • 10
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Job: Postdoctoral position in regulation of stem cell biology, Yale University
R next-gen job single cell postdoc written 5 weeks ago by josien • 0
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5 follow
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How does a physics phd approach bioinformatics with a focus on machine learning?
python career advice single cell omics written 7 weeks ago by brc • 10 • updated 7 weeks ago by Ali Jam • 10
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Tool: BioTuring Browser: Making single-cell sequencing data in published studies really accessible!
sc-rna rna single cell rna-seq tool written 6 months ago by sonpham • 560 • updated 7 weeks ago by Jennifer Pham • 290
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Seurat object can't be imported into monocle:the object type you want to export to is not supported yet
R monocle seurat single cell rna-seq written 9 weeks ago by yuhongruoyi • 10 • updated 8 weeks ago by lina.kroehling • 20
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A list of human cell cycle genes for Seurat
rna-seq cell cycle single cell written 9 weeks ago by Pestudkaru • 20 • updated 9 weeks ago by Shicheng Guo • 7.4k
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Seurat: Percentage distribution of cells in all clusters based on their treatment condition?
R rna-seq seurat single cell written 11 weeks ago by charlesgwellem • 0 • updated 11 weeks ago by Santosh Anand ♦ 4.7k
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In Seurat, what data is VlnPlot() plotting?
scrna-seq seurat rna-seq single cell written 3 months ago by Kristin Muench • 410
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Job: Postdoc position in computational analysis for single cell molecular data at Institut Curie (Paris)
job single cell computational biology written 3 months ago by jane.merlevede • 10
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single cell analysis: normalize gene expression across samples
10x cell ranger single cell written 3 months ago by neta.zuckerman • 0
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How can i control the cluster number in scRNASeq clustering by Seurat package
rna-seq single cell seurat written 3 months ago by wenchuan.xie • 0 • updated 3 months ago by igor ♦ 7.6k
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Is there any way to infer percentage from the branches in trajectories plotted in Monocle?
single-cell R monocle single cell trajectory written 7 months ago by Batu • 120 • updated 4 months ago by leon.zhan • 0
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Downloading single cell data from NCBI
ncbi fastq-dump rna seq single cell written 4 months ago by V • 100
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Deconvolution Method in Seurat and convert from SingleCellExperiment
R chip-seq seurat single cell rna-seq written 4 months ago by hamza_karakurt • 0
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Job: Staff scientist in bioinformatics. KAUST Bioscience Core Lab.
long read ngs method development job single cell written 4 months ago by YF • 10
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Align two single cell experiments
R job single cell written 4 months ago by elb • 160 • updated 4 months ago by Michael Dondrup ♦ 46k
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Single Cell RNAseq Imputation in Seurat
imputation rna-seq single cell written 7 months ago by bioinformatics.cancer • 180 • updated 5 months ago by kristoffer.vittingseerup • 1.7k
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Seurat Cell Cycle Phase Assignments
rna-seq cell cycle single cell seurat written 5 months ago by ianmw • 30 • updated 5 months ago by kristoffer.vittingseerup • 1.7k
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HUGO and Ensembl ids
ensembl hugo rna-seq single cell written 6 months ago by rsafavi • 40 • updated 5 months ago by EagleEye ♦ 6.2k
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29 follow
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Tutorial: Resources for flow cytometry bioinformatics
flow cytometry tutorial single cell written 5.0 years ago by Ahill • 1.5k
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Single Cell Sequencing Quality
bedtools samtools single cell written 6 months ago by hshah • 20 • updated 6 months ago by RamRS ♦ 21k
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Peak call? or Just convert to bedfile by bedtools bamtobed? to generate the accessibility matrix of single-end single cell ATAC-seq
atac-seq single cell written 9 months ago by soya • 0 • updated 9 months ago by Devon Ryan ♦ 89k
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10X based Single cell sequencing for comparing two different disease states
single cell rna-seq written 9 months ago by halo22 • 120 • updated 9 months ago by igor ♦ 7.6k
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plotting the expression profiles of different conditions in same plot
R single cell clustering heatmap written 10 months ago by Za • 120 • updated 9 months ago by Biostar ♦♦ 20
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QC before single cell RNA seq?
qc rna-seq single cell written 10 months ago by jevanveen • 20
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Single cell RNA sequencing Seurat and Monocle
seurat cell trajectory rna-seq single cell monocle written 12 months ago by bioinformatics.cancer • 180 • updated 10 months ago by dppb05 • 70
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how to judge the 10X genomics single cell data quality
single cell written 11 months ago by biologo • 20
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errors in newCellDataSet Monocle function
single cell rna-seq written 12 months ago by jonessara770 • 130 • updated 11 months ago by Batu • 120
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