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<prev • 101 results • page 1 of 4 • next >
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GEO COVID-19 accession with no .mtx, .crb or .rds file?
covid-19 scmrna single cell written 9 hours ago by demoraesdiogo2017 • 10
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Compare signatures between scRNA-seq clusters in R
signature rna-seq seurat single cell written 12 days ago by maricarmenromeromulero • 0
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Alternative tool for split'N'trim
rna_seq galaxy single cell snp written 16 days ago by aiswaryabioinfo • 20
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Forum: Which programming langauge shall I start as a beginner in Bioinformatics
language forum programing single cell written 5 weeks ago by nkg.bb • 0 • updated 25 days ago by Juke34 • 4.1k
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'find_gene_modules' error in the Monocle 3 tutorial
monocle monocle 3 rna-seq single cell written 3 months ago by vHelmholtz • 20 • updated 27 days ago by krovi138 • 0
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Cellranger aggr versus Seurat
10xgenomics seurat single cell written 5 weeks ago by swbarnes2 ♦ 7.8k • updated 5 weeks ago by igor ♦ 10k
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Choose root nodes in Monocle3
trajectory single cell rna-seq written 6 weeks ago by Payal • 70
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Retrieving individual cells from scRNA-seq bigWig files?
scrna-seq bigwig single cell rna-seq written 6 weeks ago by txema.heredia • 0 • updated 6 weeks ago by geek_y ♦ 11k
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Annotation of Single Cell Clusters
cluster rna-seq single cell tool written 6 weeks ago by Shelle • 0 • updated 6 weeks ago by geek_y ♦ 11k
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Seurat FeaturePlot: highlight only cells coexpressing several genes
rna-seq single cell seurat written 9 months ago by yassin • 0 • updated 7 weeks ago by rrkatreddi • 0
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6 follow
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CellRanger scRNA .mtx only uses 15% of reads in .bam?
.bam .mtx scrna cellranger single cell written 8 weeks ago by Diedes • 20 • updated 8 weeks ago by i.sudbery ♦ 7.7k
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Counting Genomes from NCBI and GOLD
genome ncbi gold metagenome single cell written 9 weeks ago by mss • 30
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Storing a gene expression matrix in a matrix.mtx
software error single cell written 2.1 years ago by Za • 120 • updated 10 weeks ago by Kevin Blighe ♦ 60k
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Unable to convert single cell RNA Seq bam to fastq using cellranger's bamtofastq
single cell cellranger single cell rna seq written 10 weeks ago by Researcher • 50
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STARsolo read1 length greater than cell barcode length and UMI length
alignment rna-seq single cell written 11 weeks ago by from the mountains • 90
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40 follow
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Tutorial: Resources for flow cytometry bioinformatics
flow cytometry tutorial single cell written 6.1 years ago by Ahill • 1.8k • updated 12 weeks ago by shamini.ayyadhury • 0
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Getting the cells from the clusters Seurat has found
R rna-seq seurat single cell written 4 months ago by suvratha • 40 • updated 3 months ago by Evan • 20
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Any recommendations for copy number variation (CNV) packages for scRNA-seq?
R scrnaseq cnv single cell written 3 months ago by jrleary • 110 • updated 3 months ago by jared.andrews07 ♦ 5.5k
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Which is the right bin size for CNV detection in low pass WGS single cell?
cnv low pass wgs genome binning single cell written 4 months ago by am • 20 • updated 4 months ago by Tomás Di Domenico • 30
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Cellranger data to Monocle Pseudotime
single cell rna-seq sequencing written 4 months ago by Payal • 70 • updated 4 months ago by jared.andrews07 ♦ 5.5k
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Force directed graphs compared to other dimensionality reduction methods for scRNA-seq
scrna-seq rna-seq single cell machine learning written 4 months ago by MutationalMeltdown • 60 • updated 4 months ago by Jean-Karim Heriche ♦ 22k
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scRNA samples: merge vs. integration
scrna single cell written 4 months ago by jhb80 • 40
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News: 2nd Workshop on Single-Cell Sequencing
bioinformatics news single cell sequencing written 4 months ago by dnsv.ev • 0
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Should cells be rows or columns when dimension reducing scRNAseq data?
analysis scrnaseq single cell written 4 months ago by jrleary • 110
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Job: PhD Position: Computational Systems Biology, The University of Memphis
stochastic deep learning single cell rna-seq job written 4 months ago by bjdaigle • 10
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How to find percentage of a gene (eg.Ppbp) for condition A and condition B from 10X Single Cell RNAseq?
rnaseq 10x single cell cellranger written 5 months ago by bioinforesearchquestions • 280 • updated 5 months ago by Biostar ♦♦ 20
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RaceID3 using 10x datasets
10x raceid single cell written 5 months ago by Seigfried • 70
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Monovar with single BAM file
snp single cell written 5 months ago by gnomee • 20
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Seurat QC Metrics For Each Cluster and Cluster Composition
single cell seurat written 5 months ago by hamindigoblue • 0 • updated 5 months ago by igor ♦ 10k
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How to Choose PCs from a HeatMap
rna seq single cell written 6 months ago by gtasource • 60 • updated 6 months ago by Kevin Blighe ♦ 60k
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