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<prev • 19 results • page 1 of 1 • next >
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Transcripts with beta close to zero are considered differentially expressed in a likelihood-ratio test in sleuth
sleuth differential-expression rna-seq written 8 days ago by elsoja • 0
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Sleuth PCA plots - how to change axis to percentage?
R sleuth pca kallisto rna-seq written 9 days ago by BioBing • 80
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208
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kallisto + sleuth: no results
R sleuth kallisto rna-seq written 20 days ago by stephanie.devos • 0
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108
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Paired and Multivariate sleuth
R sleuth kallisto rna-seq written 20 days ago by Tim D • 10
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Kallisto/Sleuth - issue when using own annotations in the sleuth_prep() function
R sleuth kallisto rna-seq written 9 weeks ago by BioBing • 80
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ENSEMBL Transcript_Accession ID conversion
ensembl sleuth kallisto rna-seq written 17 months ago by dinindu.senanayake • 0 • updated 10 weeks ago by WouterDeCoster ♦ 20k
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How do I get statistics for the interaction effect in my RNA-Seq?
ballgown sleuth differential expression rna-seq written 11 weeks ago by kyusikkim • 0
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343
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Error: Pathway analysis using Sleuth results
R sleuth pathview rna-seq gage written 7 months ago by bioinfo8 • 80 • updated 12 weeks ago by bigmawen • 230
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transcript to gene mapping after sleuth run
R sleuth biomart rna-seq kallisto written 3 months ago by bioinfo8 • 80
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Will variance between the number of reads mapped in samples impact my differential analysis?
sleuth kallisto rna-seq written 3 months ago by a.rex • 60 • updated 3 months ago by Istvan Albert ♦♦ 73k
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419
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Understanding Sleuth output for multiple samples
sleuth kallisto rna-seq written 6 months ago by Bharat Iyengar • 230
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355
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What is the Sleuth intercept and how can Sleuth be used when you have >2 treatment types?
sleuth salmon kallisto rna-seq dte written 7 months ago by james.lloyd • 70
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322
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DE analysis of low-expression transcripts
sleuth expression deseq2 rna-seq edger written 7 months ago by elsoja • 0 • updated 7 months ago by Devon Ryan ♦ 70k
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Character matrix to Numeric matrix for heatmap
R sleuth next-gen rna-seq written 8 months ago by bioinfo8 • 80
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Sleuth: Combined lrt and wt tests, clustered heatmap
R sleuth kallisto rna-seq heatmap written 8 months ago by bioinfo8 • 80
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Is Sleuth a good package?
R sleuth kallisto rna-seq written 10 months ago by student-t • 380 • updated 10 months ago by Devon Ryan ♦ 70k
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How do I obtain logFC values from sleuth results (both genes and isoforms)?
sleuth tutorial rna-seq written 16 months ago by cpcantalapiedra • 140 • updated 16 months ago by andrew.j.skelton73 • 3.6k
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differential gene expression using sleuth
sleuth kallisto rna-seq written 17 months ago by frida.danielsson • 20 • updated 16 months ago by cpcantalapiedra • 140
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get gene ids running sleuth kallisto for differential gene expression
sleuth kallisto rna-seq written 17 months ago by frida.danielsson • 20
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