Showing: snpreset
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3
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Sample size calculation for GWAS (fixed number of controls)
snp written 10 days ago by khn100 • updated 10 days ago by Kevin Blighe35k
2
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1
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71
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1
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bcftools 1.4.1 call parameters
bcftools call snp written 10 days ago by cetin.m10 • updated 10 days ago by finswimmer8.9k
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141
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102
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Multimapping reads intervention in SNP calling
alignment samtools snp mpileup written 4 weeks ago by sambioinfo20180 • updated 11 days ago by Biostar ♦♦ 20
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2
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163
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How to collect SNP dataset from databases for SNP analysis?
snp databases written 21 days ago by arr2340 • updated 12 days ago by Pierre Lindenbaum116k
2
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151
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why my ROH file result does not include some chromosome
snp plink runs of homozygosity. 50k ovine written 16 days ago by mary200 • updated 12 days ago by Kevin Blighe35k
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149
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120
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4
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71
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Haplotype annotation in VCF file of phase 3 1000 Genome project
vcf haplotype snp written 13 days ago by caggtaagtat390 • updated 13 days ago by finswimmer8.9k
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130
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6 follow
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4
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112
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why filtering sites with allele count below 3
snp sequencing written 16 days ago by mab65820 • updated 15 days ago by Jean-Karim Heriche17k
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195
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Picard tools - Cigar element being constructed with negative length
alignment rna-seq snp written 10 weeks ago by Andy20 • updated 15 days ago by Biostar ♦♦ 20
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1
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184
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1
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Calculating Heterozygosity for each SNPs.
snp written 17 days ago by mostafarafiepour60 • updated 16 days ago by Kevin Blighe35k
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122
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1
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Should zero expression values be remove in eQTL analysis?
rna-seq snp written 24 days ago by whtopjazz0 • updated 17 days ago by Fabio Marroni2.0k
1
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149
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5 follow
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SNPRelate LD Pruning List of Loci
snp snprelate written 19 days ago by jessivannatta10 • updated 17 days ago by 159932162500
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143
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1
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2
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129
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Conversion of imputed VCF file to HapMap format
rna-seq snp written 19 days ago by mab65820 • updated 18 days ago by 159932162500
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642
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variant calling using reference transcriptome
reference transcriptome rna-seq snp written 22 months ago by prasundutta87300 • updated 18 days ago by Kevin Blighe35k
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504
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Retrieve list of kept SNP's after LD pruning
vcf R gds snp snprelate written 9 months ago by leeandroid80 • updated 19 days ago by jessivannatta10
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117
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152
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MUGSY not able to perform alignment ?
alignment snp written 19 days ago by sunnykevin9710 • updated 19 days ago by WouterDeCoster35k
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233
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Beagle 4.1 - phasing and IBD using multiple chromosomes
genome snp written 11 weeks ago by mstagliamonte0 • updated 20 days ago by Biostar ♦♦ 20
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127
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166
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Viral de-novo Variant Call
assembly snp written 21 days ago by Ribas0
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111
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Conversion of imputed output file from beagle 4.1 to vcf dosage format
rna-seq snp sequencing written 21 days ago by mab65820 • updated 21 days ago by RamRS20k
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112
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vcf to venn diagram
snp written 21 days ago by Ric190
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411
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6 follow
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Neoantigen prediction Tools
next-gen alignment snp written 6 months ago by anu014160
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