Showing: snpreset
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105
votes
8
answers
39k
views
50 follow
8
answers
Workflow Or Tutorial For Snp Calling?
alignment next-gen samtools snp sequencing written 8.2 years ago by Matthieu430 • updated 3.3 years ago by alexisdereeper30
66
votes
7
answers
27k
views
36 follow
7
answers
Plotting Density Of Snps On Chromosomes
snp plot written 7.3 years ago by Leszek4.0k • updated 24 months ago by kaixian1100
96
votes
8
answers
25k
views
30 follow
8
answers
What Methods Do You Use For In/Del/Snp Calling?
short aligner snp sequencing written 9.3 years ago by Pierre Lindenbaum121k • updated 5.7 years ago by Biostar ♦♦ 20
52
votes
4
answers
34k
views
30 follow
4
answers
Filtering Vcf File
vcf indel vcftools snp written 6.9 years ago by bioinfo720 • updated 21 months ago by DataFanatic130
59
votes
4
answers
34k
views
28 follow
4
answers
How To Analyze Imputed Gwas Data
gwas imputation plink snp R written 8.4 years ago by Stephen2.7k • updated 2.6 years ago by ShirleyDai40
29
votes
6
answers
19k
views
26 follow
6
answers
Amino Acid Change To Genomic Location
amino-acids snp written 7.5 years ago by Preethi110 • updated 3.5 years ago by michael.d.mclellan140
47
votes
6
answers
19k
views
24 follow
6
answers
Get rs number based on position
mysql snp ucsc written 8.1 years ago by Zach Stednick650 • updated 8 months ago by zx87547.8k
53
votes
4
answers
17k
views
23 follow
4
answers
How To Map A Snp To A Gene Around +/- 60Kb ?
data snp human annotation written 9.3 years ago by Khader Shameer18k • updated 9.3 years ago by Aaronquinlan11k
82
votes
8
answers
15k
views
23 follow
8
answers
Good Gwas Papers / Resources
gwas literature snp written 9.0 years ago by brentp23k • updated 9.0 years ago by Larry_Parnell16k
18
votes
6
answers
9.6k
views
22 follow
6
answers
Where Can I Download Vcf Files For Publicly Available Data?
vcf snp download written 7.6 years ago by Kevin630 • updated 5.1 years ago by e.cirillo89230
49
votes
3
answers
14k
views
22 follow
3
answers
1000 Genomes Snps' Ancestral Allele
1000genomes snp written 6.5 years ago by seaboy120
81
votes
5
answers
33k
views
21 follow
5
answers
Ti/Tv Ratio Confirms Snp Discovery. Is This A General Rule?
snp written 8.5 years ago by Yahan200 • updated 5.8 years ago by Biostar ♦♦ 20
30
votes
3
answers
5.1k
views
19 follow
3
answers
LD-decay in a r2 vs distance(cm) plot
R snp written 17 months ago by adele40 • updated 16 months ago by hewm200820
97
votes
11
answers
21k
views
18 follow
11
answers
Disease Associated Snps
gwas database snp written 9.1 years ago by pixie@bioinfo1.4k • updated 5.5 years ago by vaibhav0
49
votes
7
answers
33k
views
18 follow
7
answers
How Can I Merge A Large Amount Of Vcf Files?
vcf merge vcftools snp written 7.0 years ago by Matt W240 • updated 12 months ago by ATpoint19k
31
votes
7
answers
8.2k
views
18 follow
7
answers
Variant Function Prediction
variant effect snp written 5.3 years ago by User 1933340 • updated 3.3 years ago by christopher medway440
17
votes
2
answers
3.8k
views
18 follow
2
answers
Best tool for variant calling
genome alignment next-gen snp written 14 months ago by williamsbrian5064170 • updated 8 months ago by claire0
65
votes
12
answers
13k
views
17 follow
12
answers
Mapping Snps To Pathways
pathway gene genotyping snp enrichment written 9.4 years ago by Pierre Lindenbaum121k • updated 7.9 years ago by Vova Naumov220
35
votes
5
answers
11k
views
16 follow
5
answers
Visualize Effect Of Snp Variant On Protein Structure
protein visualization structure snp written 9.2 years ago by Hanif Khalak1.2k • updated 2.4 years ago by GabrielMontenegro530
40
votes
6
answers
54k
views
16 follow
6
answers
Synonymous And Non-Synonymous Snps
non snp written 8.5 years ago by Elena240 • updated 4.4 years ago by HG1.1k
26
votes
3
answers
19k
views
16 follow
3
answers
How Can I Count Snps In My Vcf Files?
vcf snp awk written 7.0 years ago by Matt W240 • updated 3.9 years ago by ravi.uhdnis170
22
votes
3
answers
1.8k
views
16 follow
3
answers
How to get sample names and genotype for SNP in multi-sample VCF file
gatk genotype snp written 17 months ago by hellbio370 • updated 12 months ago by Pierre Lindenbaum121k
39
votes
6
answers
23k
views
15 follow
6
answers
Sift Or Polyphen
non mutation snp written 8.4 years ago by Dataminer2.6k • updated 4.3 years ago by Biostar ♦♦ 20
34
votes
2
answers
19k
views
15 follow
2
answers
Homozygous Indel/Snp & Heterozygous Indel/Snp
snp written 5.9 years ago by always_learning970 • updated 2.0 years ago by ibseq120
25
votes
2
answers
18k
views
15 follow
2
answers
Tcga: "Tumor, Matched Normal" Vs. "Normal, Matched Tumor"
somatic tcga snp written 5.7 years ago by Mdeng520 • updated 4.6 years ago by Chirag Nepal2.2k
40
votes
7
answers
8.8k
views
14 follow
7
answers
Eqtl Database Available?
gene database eqtl snp written 8.3 years ago by Krisr460 • updated 8.3 years ago by Argossy40
34
votes
3
answers
20k
views
14 follow
3
answers
33
votes
5
answers
5.0k
views
13 follow
5
answers
Short Read Aligners/ Snp Calling Comparison
sequencing next-gen mapping snp comparison written 8.7 years ago by Pierre Lindenbaum121k • updated 5.6 years ago by Biostar ♦♦ 20
26
votes
3
answers
2.7k
views
13 follow
3
answers
29
votes
4
answers
11k
views
13 follow
4
answers
Get Flanking Sequence Given A List Of Positions
sequence biomart galaxy snp ucsc written 8.3 years ago by Stephen2.7k • updated 5.8 years ago by Biostar ♦♦ 20
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