Showing: snpreset
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VQSR with extremely low TPs (<0.01), How low can tranche goes?
exome vqsr gatk4 snp written 44 minutes ago by greyman80 • updated 17 minutes ago by ATpoint14k
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Error while running SNPEff
snp written 2 hours ago by aditigrawal0 • updated 1 hour ago by jrj.healey11k
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Two genes in one SNP
gene snp written 9 hours ago by first30 • updated 3 hours ago by zx87546.8k
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snp identification with Haplotypecaller and SelectVariants
gatk snp written 19 hours ago by felipead660 • updated 19 hours ago by Pierre Lindenbaum118k
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Add rsid to LD output from vcftools
vcf snp ld vcftools written 3.4 years ago by jfertaj90 • updated 1 day ago by zx87546.8k
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Sample clustering using snp info?
deconvolution dna seq snp written 11 days ago by vinvan50 • updated 1 day ago by Biostar ♦♦ 20
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illumina results to do genotype imputation,about AB to ATCG
illumina snp genotype imputation written 2.6 years ago by sacuba10 • updated 1 day ago by mw9550
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Position of SNPs with respect to codon
codon snp trna written 3.3 years ago by Chirag Nepal2.2k • updated 1 day ago by rtasakis0
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SNP absolute number or density between chromosomes
annotated snp density written 24 days ago by bwczech60 • updated 2 days ago by pltbiotech_tkarthi130
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Orphan read in PE seq
snp written 2.3 years ago by cmat340 • updated 3 days ago by Biostar ♦♦ 20
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5 follow
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Merge vcf files with multiple samples into one vcf with all variants
vcf snp written 3 months ago by bioinfo8940 • updated 3 days ago by zx87546.8k
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alternative chromosomes in liftover, what does this mean?
genome snp written 6 weeks ago by rshoobs0 • updated 3 days ago by Biostar ♦♦ 20
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News: Phylogenomics course in Berlin
news next-gen snp written 3 days ago by carlopecoraro2910
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How to combine 2000 samples in multi-sample SNP calling
snp written 4 days ago by yuzhe8910 • updated 4 days ago by RamRS20k
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Haplotypes analysis from SNP chip data
snp written 9 days ago by rthapa0 • updated 6 days ago by Kevin Blighe39k
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7 follow
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Minor allele frequency calculation
next-gen snp written 4.4 years ago by Tark50 • updated 7 days ago by pltbiotech_tkarthi130
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Splitting string in a column using character
regex sed snp awk written 8 days ago by sofie_carolina0 • updated 7 days ago by zx87546.8k
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Mauve alignment vs samtools for SNP calling
snp calling alignment samtools snp mauve written 8 days ago by gabriel.jabud0 • updated 8 days ago by jrj.healey11k
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