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Conflicts in the VCF file
vcf gwas snpeff sequence sequencing written 11 days ago by Negin0 • updated 11 days ago by RamRS30k
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5 follow
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How to get input for provean from vcf files annotated by snpeff?
vcf provean snpeff written 5.9 years ago by shl198380 • updated 5 weeks ago by kmkdesilva90
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snpEFF chr not found error bacterial genome
annotation snpeff snp written 5.8 years ago by SemiQuant70 • updated 7 weeks ago by Sbioinfo0
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snpEff killed while reading genome version
snpeff snp written 5 months ago by j.lunger1810 • updated 4 months ago by Biostar ♦♦ 20
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Phasing and de novo finding from VCF file
vcf de novo snpeff written 4 months ago by Maxime0 • updated 4 months ago by Pierre Lindenbaum131k
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SNP annotation using snpEFF
vcf annotation snpeff snp written 4 months ago by shrutidabral10 • updated 4 months ago by Pierre Lindenbaum131k
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SNPEFF genome build with specific codon usage
annotation snpeff variants written 6 months ago by Stephane Plaisance420 • updated 5 months ago by Biostar ♦♦ 20
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Variant effect prediction
polyphen sift snpeff written 5 months ago by wrab42520
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143
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Reference genome for snpEff
vcf assembly snpeff written 5 months ago by j.lunger1810
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Issue converting VCF to MAF using snpEff annotations
maf vcf snpeff vcf2maf written 5.7 years ago by Marina Manrique1.3k • updated 6 months ago by tsy199009290
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Fail to build a database in SNPeff
build_data_base snpeff written 6 months ago by r0062811210 • updated 6 months ago by ATpoint40k
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Running snpeff in cancer analysis mode
somatic vs germaline snpeff written 6 months ago by atheeth140 • updated 6 months ago by Kevin Blighe66k
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snpEff and SIFT calculation
sift snpeff written 6 months ago by misterie90
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SnpSift Annotate replace ID column
snpsift annotation snps snpeff written 8 months ago by Jimbou770 • updated 8 months ago by Nicholas Mancuso70
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SnpEff database with maker annotation format
snpeff maker written 10 months ago by Picasa560 • updated 10 months ago by prince2612199170
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