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Problem in LD-based SNP pruning using SNPRelate
R snp snprelate written 11 weeks ago by evelyn110 • updated 11 weeks ago by zx87549.6k
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SNPRelate; Plot looking blank
snprelate written 6.1 years ago by kumar.vinod81280 • updated 5 months ago by hdfstutorial0
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R SNPRelate and PLINK PCA eigenvectors negatives of each other
R bioconductor snprelate plink gwas written 5 months ago by dumeir20 • updated 5 months ago by chrchang5237.3k
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Find particular SNPs affecting PCA
myposts pca snp snprelate written 4.7 years ago by lovestowell10 • updated 6 months ago by rturba070
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Dendrogram on SNPs from VCF file?
snphylo fasttree snprelate written 19 months ago by popescuiofelia10 • updated 16 months ago by sankar200410
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snpgdsLDpruning filtering all SNPs as non-autosomes. Why?
snpgdsldpruning snprelate written 2.8 years ago by jezkovt0 • updated 18 months ago by BioGeorge0
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SNPRelate LD Pruning List of Loci
snp snprelate written 21 months ago by jessivannatta10 • updated 21 months ago by 159932162500
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Retrieve list of kept SNP's after LD pruning
vcf R gds snp snprelate written 2.5 years ago by leeandroid90 • updated 21 months ago by jessivannatta10
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SNPs in high LD after LD pruning
ld snprelate written 2.0 years ago by Ana170 • updated 2.0 years ago by Kevin Blighe65k
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SNP correlation to PCA eigenvectors
eigenvectors pca snp snprelate written 4.7 years ago by reid.j.thompson0 • updated 4.7 years ago by ayushiyakshi0
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combining gds files into one gds file
gds snprelate written 5.4 years ago by gulcek20
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using snprelate on 23andme dataset
gds 23andme reference alleles snprelate written 5.4 years ago by abims10 • updated 5.4 years ago by Neilfws48k
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SNPRelate: how to give specific color to a population in PCA plot
snprelate written 5.5 years ago by kumar.vinod81280 • updated 5.5 years ago by coleman_jonathan420
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