Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: snps • reset
or   Classic search
<prev • 203 results • page 1 of 7 • next >
0
votes
1
answer
159
views
1
answer
SNps and calculation of sample size
snps written 15 days ago by efsvdo • 0 • updated 10 days ago by pltbiotech_tkarthi • 100
0
votes
0
answers
80
views
0
answers
From mpileup on bam files to TMB calculation, how is it done?
snps bam mutations mpileup tmb written 26 days ago by Pin.Bioinf • 240
1
vote
0
answers
134
views
0
answers
Difference between Private SNPs and Singleton SNPs
variant calling gatk snps snp population genetics written 4 weeks ago by prasundutta87 • 330
5
votes
5
answers
864
views
5
answers
VariantCalling with single sanger read
indel snps variantcalling blast written 2.6 years ago by Amirosein • 70 • updated 5 weeks ago by trausch • 1.2k
0
votes
0
answers
93
views
0
answers
Change ALT field in VCF
vcf gwas snps written 5 weeks ago by sonia.olaechea • 50
1
vote
1
answer
297
views
1
answer
How to calculate the fraction of bases that are different from the reference base using samtools mpileup ?
samtools mpileup snps reference base fractions written 3 months ago by M.O.L.S • 0
4
votes
1
answer
187
views
1
answer
PLINK assoc input: can it be two vcf files case/control?
vcf snps association plink written 11 weeks ago by Pin.Bioinf • 240 • updated 11 weeks ago by Kevin Blighe ♦ 39k
0
votes
0
answers
138
views
0
answers
Ensembl Biomart Allele Frequency for different ethnicity
maf allele frequency snps ensembl biomart written 12 weeks ago by iside • 10
0
votes
0
answers
148
views
0
answers
Identifying consensus sequence between multiple Arabidopsis genome sequences
consensus alignment snps variations plant written 3 months ago by bioinforesearchquestions • 200
3
votes
0
answers
1.1k
views
6 follow
0
answers
Extract SNPs and SNP ID's from vcf file
vcf 1000genomes snps extract written 16 months ago by aadhirareddy1323 • 20 • updated 3 months ago by zx8754 ♦ 6.7k
0
votes
0
answers
1.4k
views
0
answers
GATK DP filter for multiple samples
gatk snps written 2.6 years ago by sun.nation • 120 • updated 3 months ago by Flávia Rogério • 0
6
votes
2
answers
361
views
5 follow
2
answers
1000Genomes population allele frequencies for list of SNPs
1000genomes snps written 3 months ago by sonia.olaechea • 50 • updated 3 months ago by Pierre Lindenbaum ♦ 117k
16
votes
6
answers
16k
views
9 follow
6
answers
Remove columns and rows which have only NAs without deleting all the data
R missing data snps correlation written 20 months ago by ElenaL • 0 • updated 3 months ago by slegotsky • 0
0
votes
1
answer
1.3k
views
1
answer
Hardy-Weinbergy Equilibrium and SNPs
snps hardy-weinberg minor allelic frequency written 3.3 years ago by waynestatetutor • 0 • updated 3 months ago by Biostar ♦♦ 20
2
votes
1
answer
757
views
1
answer
Nanopore SNP and indels calling tool
snps indels tools calling nanopore written 8 months ago by tarek.mohamed • 240 • updated 3 months ago by WouterDeCoster ♦ 37k
0
votes
1
answer
201
views
1
answer
find LD of list of SNPs, located on different chromosomes
different chromosomes list snps ld written 3 months ago by anamaria • 0 • updated 3 months ago by toralmanvar • 750
9
votes
3
answers
22k
views
9 follow
3
answers
Obtaining The Snp Rs Number With The Chromosomal Position
R bioconductor snps written 5.8 years ago by Sheila • 280 • updated 3 months ago by hsiaoyi0504 • 40
10
votes
0
answers
716
views
0
answers
Minor allele frequency
alleles gwas snps written 2.3 years ago by alessandrotestori7 • 330 • updated 4 months ago by Biostar ♦♦ 20
3
votes
3
answers
319
views
3
answers
How to download VCF of 1000 genome project with population frequencies?
vcf rsids snps 1000genome written 4 months ago by bioinforesearchquestions • 200 • updated 4 months ago by finswimmer ♦ 11k
5
votes
1
answer
522
views
1
answer
GWAS in Plink - phenotype file format
gwas snps plink phenotype written 5 months ago by SGMS • 50 • updated 5 months ago by zx8754 ♦ 6.7k
0
votes
1
answer
289
views
1
answer
Error: Snakemake skiped a rule
snakefile snps pipeline snakemake indels written 5 months ago by c.clarido • 40 • updated 5 months ago by rizoic • 190
0
votes
2
answers
241
views
2
answers
Best practices for variant calling on multiple sequencing runs of the same sample
variant calling vcf snps written 5 months ago by Damian Kao ♦ 15k • updated 5 months ago by swbarnes2 ♦ 4.9k
0
votes
0
answers
225
views
0
answers
GTEX - how to upload more than one rsIDs to get gene expression or eQTL information
rsids snps gtex written 5 months ago by SGMS • 50
1
vote
0
answers
453
views
0
answers
Error: Line 2 of .ped file has more tokens than expected.
snps plink written 5 months ago by sonia.olaechea • 50 • updated 5 months ago by zx8754 ♦ 6.7k
5
votes
1
answer
724
views
6 follow
1
answer
Need help with R script to edit x-axis of snp density plot
R snps density chromosome written 8 months ago by deepti1rao • 20 • updated 5 months ago by bernatgel • 1.8k
6
votes
1
answer
328
views
5 follow
1
answer
Finding out if certain SNP positions fall into certain gene regions
gene region snps unix R written 5 months ago by SGMS • 50 • updated 5 months ago by Alex Reynolds ♦ 27k
1
vote
1
answer
286
views
1
answer
Preference about IMPUTATION TOOL
snps imputation tool written 6 months ago by wonseok.cchoi • 0 • updated 5 months ago by thassia.carratto • 10
1
vote
1
answer
218
views
1
answer
Using one bam file with huge coverage, How to generate several bam files with different coverage
filter snps caller bam written 6 months ago by tarek.mohamed • 240 • updated 6 months ago by WouterDeCoster ♦ 37k
3
votes
2
answers
2.7k
views
2
answers
Identifying private and shared SNPs using VCFtools
snps vcftools written 2.8 years ago by outlier95 • 10 • updated 7 months ago by Jorge Amigo ♦ 11k
0
votes
0
answers
209
views
0
answers
vcf v4.2 consequences of missense snps
vcf plant snps missense sift written 7 months ago by deepti1rao • 20
<prev • 203 results • page 1 of 7 • next >
Recent Votes
Recent Locations • All »
  • Greece, just now
  • ISBReMIT, 1 minute ago
  • United States, 1 minute ago
  • United Kingdom, 1 minute ago
  • State College, PA, Penn State, 2 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1970 users visited in the last hour