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Comparing SPAdes assemblies to each other?
spades denovo written 20 months ago by laurenkleine1820 • updated 5 days ago by Istvan Albert ♦♦ 84k
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Where can i get library.txt file for SSPACE?
sspace spades written 4.0 years ago by Calvin60 • updated 6 months ago by Naomifu0
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Assemble bacterial .fastq files and find differences (SPAdes followed by MUMmer)
spades mummer bacteria contig snp written 10 months ago by LRStar190 • updated 10 months ago by Joe17k
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what is Kmer coverage
genome assembly sequence metagenome spades written 10 months ago by vm.higareda20 • updated 10 months ago by Buffo1.8k
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SPAdes error during assembly, error code -6
software error assembly spades written 11 months ago by marongiu.luigi520 • updated 11 months ago by h.mon30k
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SPAdes error code -6
assembly metagenomics spades written 12 months ago by Lina F160
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Different metrics with same kmer values in SPAdes assembly
assembly spades kmer written 14 months ago by gustavo.teixeira0 • updated 14 months ago by ATpoint36k
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 2.5 years ago by fhsantanna490 • updated 16 months ago by bhclement0
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Increase memory limit in SPAdes-3.6.1
hybrid assembly next-gen alignment spades written 16 months ago by ashaneev0720 • updated 16 months ago by Buffo1.8k
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How to give merged reads as input in spades
merged assembly spades de novo written 18 months ago by manjumoorthy9520 • updated 18 months ago by Joseph Hughes2.8k
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Differences in annotations using Prokka on assembly done by SPAdes
annotation spades prokka written 20 months ago by jeetsahu10 • updated 18 months ago by Biostar ♦♦ 20
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SPAdes stuck for almost 24h, restart it didn't work
spades written 18 months ago by lucia10 • updated 18 months ago by Joe17k
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How do I access genome coverage using SPADES?
genome spades coverage myposts written 4.9 years ago by fhsantanna490 • updated 20 months ago by DanielC120
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Perl script review
perl spades written 20 months ago by Mostafa Mahmoud0 • updated 20 months ago by Michael Dondrup47k
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