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memory allocation in metaSpades
assembly metagenomics spades ram written 3 months ago by Maorkn0 • updated 3 months ago by GenoMax94k
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Prokka and plasmidspades unexpectedly reveal no plasmid
plasmid spades prokka plasmidspades written 14 months ago by claping0 • updated 3 months ago by appiahv0
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Finding structural variants after Spades
sv spades vg written 5 months ago by Pierre Lindenbaum133k • updated 3 months ago by samuel.a.odonnell70
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contigs of spades
assembly spades written 4 months ago by sami20 • updated 4 months ago by swbarnes29.3k
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Rename and move Spades assemblies in batch
batch spades bash written 4 months ago by jellila0 • updated 4 months ago by Asaf8.5k
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SPAdes is running out of memory
hybrid spades memory assembly fungi written 3.4 years ago by Lina F200 • updated 5 months ago by carisdak0
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SPAdes run with different results
spades written 5 months ago by lizabe10
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Comparing SPAdes assemblies to each other?
spades denovo written 2.2 years ago by laurenkleine1820 • updated 6 months ago by h.mon32k
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Where can i get library.txt file for SSPACE?
sspace spades written 4.5 years ago by Calvin60 • updated 12 months ago by Naomifu0
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Assemble bacterial .fastq files and find differences (SPAdes followed by MUMmer)
spades mummer bacteria contig snp written 16 months ago by LRStar190 • updated 16 months ago by Joe18k
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what is Kmer coverage
genome assembly sequence metagenome spades written 16 months ago by vm.higareda20 • updated 16 months ago by Buffo1.8k
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SPAdes error during assembly, error code -6
software error assembly spades written 17 months ago by marongiu.luigi520 • updated 17 months ago by h.mon32k
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SPAdes error code -6
assembly metagenomics spades written 18 months ago by Lina F200
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Different metrics with same kmer values in SPAdes assembly
assembly spades kmer written 20 months ago by gustavo.teixeira0 • updated 20 months ago by ATpoint44k
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 3.0 years ago by fhsantanna490 • updated 22 months ago by bhclement0
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Increase memory limit in SPAdes-3.6.1
hybrid assembly next-gen alignment spades written 22 months ago by ashaneev0720 • updated 22 months ago by Buffo1.8k
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How to give merged reads as input in spades
merged assembly spades de novo written 2.0 years ago by manjumoorthy9520 • updated 24 months ago by Joseph Hughes2.9k
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