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memory allocation in metaSpades
assembly metagenomics spades ram written 18 days ago by Maorkn0 • updated 18 days ago by genomax91k
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Prokka and plasmidspades unexpectedly reveal no plasmid
plasmid spades prokka plasmidspades written 11 months ago by claping0 • updated 26 days ago by appiahv0
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Finding structural variants after Spades
sv spades vg written 12 weeks ago by Pierre Lindenbaum131k • updated 28 days ago by samuel.a.odonnell60
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contigs of spades
assembly spades written 8 weeks ago by sami20 • updated 8 weeks ago by swbarnes28.9k
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Rename and move Spades assemblies in batch
batch spades bash written 9 weeks ago by jellila0 • updated 9 weeks ago by Asaf8.4k
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SPAdes is running out of memory
hybrid spades memory assembly fungi written 3.2 years ago by Lina F190 • updated 12 weeks ago by carisdak0
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SPAdes run with different results
spades written 3 months ago by lizabe10
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Comparing SPAdes assemblies to each other?
spades denovo written 24 months ago by laurenkleine1820 • updated 3 months ago by h.mon31k
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Where can i get library.txt file for SSPACE?
sspace spades written 4.3 years ago by Calvin60 • updated 9 months ago by Naomifu0
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Assemble bacterial .fastq files and find differences (SPAdes followed by MUMmer)
spades mummer bacteria contig snp written 14 months ago by LRStar190 • updated 14 months ago by Joe18k
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what is Kmer coverage
genome assembly sequence metagenome spades written 14 months ago by vm.higareda20 • updated 14 months ago by Buffo1.8k
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SPAdes error during assembly, error code -6
software error assembly spades written 15 months ago by marongiu.luigi520 • updated 15 months ago by h.mon31k
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SPAdes error code -6
assembly metagenomics spades written 15 months ago by Lina F190
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Different metrics with same kmer values in SPAdes assembly
assembly spades kmer written 17 months ago by gustavo.teixeira0 • updated 17 months ago by ATpoint40k
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 2.8 years ago by fhsantanna490 • updated 19 months ago by bhclement0
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Increase memory limit in SPAdes-3.6.1
hybrid assembly next-gen alignment spades written 20 months ago by ashaneev0720 • updated 20 months ago by Buffo1.8k
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How to give merged reads as input in spades
merged assembly spades de novo written 21 months ago by manjumoorthy9520 • updated 21 months ago by Joseph Hughes2.8k
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Differences in annotations using Prokka on assembly done by SPAdes
annotation spades prokka written 24 months ago by jeetsahu10 • updated 21 months ago by Biostar ♦♦ 20
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