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Splice junction sites and number of splitted reads from STAR aligned bam

sashimi plot rna-seq splice junctions written 19 months ago by filippo.martignano • 10 • updated 7 months ago by phaedragius • 0

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Differential Expression of Splice Junctions using voom-limma/voom-diffSplice

de limma rna-seq splice junctions written 2.7 years ago by stefanos.bamopoulos • 40 • updated 21 months ago by Biostar ♦♦ 20

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Maximum spliced alignment overhang in STAR output

alignment alignment overhang star splice junctions written 3.4 years ago by sradio91 • 20 • updated 3.4 years ago by Jeffin Rockey • 1.1k

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How can i compute DNA methylation levels around splice junctions?

dna methylation splice junctions wig bs-seq bed written 4.2 years ago by thefirstrealace • 30

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Convert STAR sjdb to gtf

rnaseq gtf star rna-seq splice junctions written 4.9 years ago by lkmklsmn • 920 • updated 4.9 years ago by Devon Ryan ♦ 93k

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Looks what I need, will give a try! Thanks
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Please use `ADD COMMENT` and leave the answer field for answers. Thank you.
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Hi, already done this!
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Many thanks for you answer, in this way I found that I need! Best!
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