Showing: srareset
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2
votes
1
answer
67
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1
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issue with fastQ reads download from NCBI-SRA database?
ncbi sra fastq ngs sequencing written 4 days ago by Dineshkumar K10 • updated 4 days ago by Researcher40
4
votes
0
answers
231
views
0
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How do I find out the adaptor sequences for SRA data?
sra adaptor written 3 months ago by MAPK1.4k • updated 6 days ago by hermidalc0
8
votes
1
answer
265
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5 follow
1
answer
NCBI SRA AWS AMI
ncbi sra aws s3 written 5 weeks ago by joe40 • updated 9 days ago by hermidalc0
0
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0
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88
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0
answers
4
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0
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178
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0
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2
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2
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191
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2
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3
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1
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244
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6 follow
1
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How to create own SRAdb
geo sra sradb written 3 months ago by Deepak Tanwar4.0k • updated 3 months ago by Sean Davis25k
3
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2
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306
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2
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SRA Toolkit cannot download
sra written 3 months ago by Barış Ekim10 • updated 3 months ago by ATpoint22k
27
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4
answers
8.7k
views
14 follow
4
answers
Is There A Faster Replacement For Fastq-Dump (From The Sra-Toolkit)?
sra fastq written 5.6 years ago by Devon Ryan91k • updated 3 months ago by sschmeier80
7
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2
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260
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2
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What is the difference between SRR, DRR, ERR ?
sra rna-seq written 3 months ago by Helen30 • updated 3 months ago by Malka20
2
votes
1
answer
168
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6 follow
1
answer
How to find correspondence between GSM and all SRA identifiers (SRR DRR ERR) ?
srr sra geo rna-seq written 3 months ago by Helen30 • updated 3 months ago by predeus1.2k
14
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2
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4.0k
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12 follow
2
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Get a complete GSM-to-SRX/SRR table
geo sra gsm gse sradb written 2.5 years ago by predeus1.2k • updated 3 months ago by Helen30
1
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0
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150
views
0
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Latest https for SRAmetadb.sqlite db
ncbi sra srametadb written 4 months ago by joe40
4
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0
answers
327
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5 follow
0
answers
Downloading paired end fastq from SRA
singlecell sra rna-seq written 4 months ago by t.t10 • updated 4 months ago by ATpoint22k
0
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1
answer
280
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1
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2
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1
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393
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1
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Download data from GEO/SRA using link
geo sra fastq written 5 months ago by rioualen390 • updated 5 months ago by genomax71k
0
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1
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225
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1
answer
Uploading to SRA: multiple files per BioSample
ncbi sra next-gen written 6 months ago by jo.wolfe0 • updated 6 months ago by swbarnes26.5k
3
votes
1
answer
351
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1
answer
SRA: fastq-dump gives different number of sequences
sra sequence written 10 months ago by jeetsahu10 • updated 6 months ago by Biostar ♦♦ 20
7
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1
answer
275
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1
answer
SRA from NCBI?
ncbi sra fastq rna-seq written 6 months ago by star190
0
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0
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200
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0
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2
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2
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357
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2
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Finding Reads from a DNA Virus
sra virus detection rna-seq written 6 months ago by nickeener0 • updated 6 months ago by darren.obbard20
26
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1.0k
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15 follow
0
answers
4
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1
answer
733
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1
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0
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0
answers
311
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0
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SRA submission Error: Command based
sra rna-seq written 8 months ago by suren040 • updated 7 months ago by Biostar ♦♦ 20
1
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0
answers
208
views
0
answers
1
vote
1
answer
703
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1
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SRA record can not be found!
sra written 2.1 years ago by Zhizhong240 • updated 7 months ago by Biostar ♦♦ 20
8
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1
answer
756
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1
answer
why fastq-dump doesn`t work?
sra prefetch fastq-dump written 7 months ago by star190 • updated 7 months ago by ATpoint22k
15
votes
2
answers
825
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8 follow
2
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Bulk download of entire BioProject SRA
ncbi sra sratoolkit entrez utilities bioproject written 7 months ago by Anand Rao240 • updated 7 months ago by arup1.7k
0
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0
answers
410
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0
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Windows batch cmd for fastq-dump
sra windows fastq-dump written 10 months ago by rrbutleriii70 • updated 7 months ago by Biostar ♦♦ 20
0
votes
0
answers
325
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0
answers
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