Showing: srareset
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10
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6 follow
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Where Can I Get The Asperasoft Command Line Client Ascp
sra aspera written 4.6 years ago by Jeremy Leipzig16k • updated 4 days ago by ososa0
6
votes
1
answer
97
views
1
answer
SRR/ERR/DRR prefixes in SRA - What's the difference?
sra written 6 days ago by crawforc330 • updated 6 days ago by lh329k
8
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1
answer
155
views
1
answer
Weird fastq format
sra fastq format rna-seq written 8 days ago by tw3028210 • updated 8 days ago by genomax226k
5
votes
3
answers
690
views
3
answers
SRA to fastq
sra fastq next-gen sequencing written 19 months ago by anjanaram170 • updated 11 days ago by arunprasanna8310
44
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3
answers
429
views
12 follow
3
answers
0
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0
answers
106
views
0
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search SRA or ENA for targeted sequencing data
sra ena written 8 weeks ago by igor3.9k • updated 26 days ago by Biostar ♦♦ 10
3
votes
1
answer
141
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1
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Get a complete GSM-to-SRX/SRR table
geo sra gsm gse sradb written 4 weeks ago by predeus330 • updated 4 weeks ago by Gregor Sturm30
0
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1
answer
123
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1
answer
Cancer data for histone Chip-seq in human and mouse
geo sra cancer chip-seq histone written 6 weeks ago by Saad Khan310 • updated 6 weeks ago by Ben0
4
votes
1
answer
241
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1
answer
Tutorial: How to upload your RNA-Seq data to NCBI Sequence Read Archive (SRA)
ncbi sra tutorial biosample bioproject written 7 weeks ago by CandiceChuDVM1.1k • updated 7 weeks ago by igor3.9k
0
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133
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0
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123
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8
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42k
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106 follow
8
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 2.7 years ago by Obi Griffith15k • updated 10 weeks ago by al-ash0
4
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2
answers
174
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2
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Downloading data from Short Read Archive
sra short read archive written 10 weeks ago by cristian40 • updated 10 weeks ago by EagleEye3.5k
17
votes
3
answers
2.7k
views
5 follow
3
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Aligning paired end fastq files dumped from SRA
sra fastq bwa mem paired written 2.4 years ago by Zev.Kronenberg10k • updated 11 weeks ago by Christian2.5k
6
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2
answers
393
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5 follow
2
answers
Entrez API returns results different from main search?
python entrez sra written 11 weeks ago by Philipp Bayer4.1k • updated 11 weeks ago by DCGenomics280
0
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0
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216
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0
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blastn_vdb "- Error opening the following db(s): "
wgs sra-toolkit blastn_vdb blast sra written 3 months ago by musta123410 • updated 3 months ago by Ram11k
0
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1
answer
254
views
1
answer
4
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3
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1.9k
views
3
answers
8
votes
4
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1.9k
views
5 follow
4
answers
How can I find SRA MD5 checksums for FASTQ files?
checksum sra md5 written 22 months ago by rivanov40 • updated 3 months ago by genomax226k
6
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1
answer
248
views
1
answer
2
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3
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540
views
3
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Error while downloading data using SRA toolkit
sra download sra-toolkit error chip-seq written 3 months ago by bhardwaj19910 • updated 3 months ago by Chunjie Liu180
0
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0
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210
views
0
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EBI SRA FTP is not working
ebi sra written 3 months ago by BAGeno10
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0
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340
views
0
answers
Comparison of TCGA and SRA data
sra diffrential expression tcga rna-seq written 5 months ago by swatikrishna11310 • updated 3 months ago by Biostar ♦♦ 10
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235
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0
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1
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0
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315
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0
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0
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0
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208
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0
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Building a matrix of Profile Expression
geo R sra written 6 months ago by grecoandreauni0 • updated 4 months ago by Biostar ♦♦ 10
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232
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0
answers
1
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1
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238
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1
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5
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2
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708
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2
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fastq dump error
sra sra toolkit fastq-dump written 4 months ago by Satya670 • updated 4 months ago by piet1.3k
6
votes
6
answers
8.1k
views
10 follow
6
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How To Fix Fastq File From Sra When Fastq-Dump Split At Wrong Position
sra fastq paired conversion written 5.6 years ago by Aaron H170 • updated 5 months ago by A.Machado0
10
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3
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1.2k
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3
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How to split paired end SRA file into 2 correct fastq files
sra fastq next-gen written 5 months ago by thustar30 • updated 5 months ago by Antonio R. Franco3.3k
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