Showing:
sra • reset1
vote
2
answers
1.1k
views
2
answers
4
votes
2
answers
69
views
2
answers
written 4 days ago by
Phoenix Mu • 0
• updated
4 days ago by
Renesh • 1.5k
182
votes
9
answers
75k
views
160 follow
9
answers
written 4.3 years ago by
Obi Griffith ♦ 17k
• updated
4 days ago by
Renesh • 1.5k
0
votes
1
answer
131
views
1
answer
written 8 days ago by
beneopp • 0
• updated
5 days ago by
Phil Ewels • 150
2
votes
2
answers
175
views
2
answers
3
votes
1
answer
162
views
1
answer
Tutorial:
NCBI submissions: SRA and TSA
written 26 days ago by
saraoppenheim • 30
2
votes
1
answer
123
views
1
answer
is there a way to get SRA info (Paired Library, Sample id, Seq Tech... etc) using a list of SRA IDS?
written 27 days ago by
S AR • 50
1
vote
1
answer
113
views
1
answer
written 5 weeks ago by
tim.ivanov.92 • 10
• updated
5 weeks ago by
vkkodali • 690
2
votes
1
answer
101
views
1
answer
2
votes
1
answer
143
views
1
answer
written 7 weeks ago by
shira.zaltsman • 10
• updated
6 weeks ago by
vkkodali • 690
1
vote
0
answers
129
views
0
answers
written 7 weeks ago by
NAVID.BAVI • 0
• updated
7 weeks ago by
genomax ♦ 59k
9
votes
5
answers
2.0k
views
11 follow
5
answers
written 16 months ago by
Alejandro Jimenez Sanchez • 120
• updated
7 weeks ago by
shengwei • 30
0
votes
0
answers
292
views
0
answers
5
votes
3
answers
8.5k
views
6 follow
3
answers
written 5.7 years ago by
deepbiofever • 10
• updated
8 weeks ago by
juan.olvido • 0
3
votes
1
answer
368
views
1
answer
3
votes
2
answers
163
views
5 follow
2
answers
written 9 weeks ago by
fanglujing • 30
• updated
9 weeks ago by
t.kuilman • 710
1
vote
1
answer
1.1k
views
1
answer
written 2.8 years ago by
Adrian Pelin • 2.2k
• updated
12 weeks ago by
RamRS ♦ 19k
4
votes
2
answers
324
views
2
answers
written 12 weeks ago by
Sparrow_kop • 190
• updated
12 weeks ago by
harish • 130
3
votes
0
answers
425
views
0
answers
1
vote
2
answers
579
views
2
answers
written 13 months ago by
majeedaasim • 20
• updated
3 months ago by
gtrwst9 • 0
0
votes
1
answer
345
views
1
answer
7
votes
5
answers
1.3k
views
5
answers
8
votes
1
answer
224
views
1
answer
48
votes
4
answers
23k
views
31 follow
4
answers
written 4.8 years ago by
biorepine • 1.4k
• updated
6 months ago by
Federico Giorgi • 420
Recent Votes
- A: MACS for chip-seq: difference between sonication size(bandwidth) and fragment si
- A: bash & quickGO to download gene symbols of a GO term
- C: Filter the non-redundant NCBI database based on taxonomy
- C: Filter the non-redundant NCBI database based on taxonomy
- A: Normalization for small non-coding RNA (piRNAs)
- C: How To Deal With Duplicate Row Names Error In R
- A: annotation - biomaRt - getBM - multiple entrez ID
Recent Locations •
All »
- United Kingdom, 2 minutes ago
- Brazil, 6 minutes ago
Recent Awards • All »
- Scholar to vkkodali • 690
- Scholar to ATpoint ♦ 11k
- Supporter to tomdstanton • 0
- Scholar to Kevin Blighe ♦ 33k
- Teacher to finswimmer ♦ 8.1k
- Teacher to Jean-Karim Heriche ♦ 17k
Recent Replies
-
A: GMAP error - Problem Sequence: TRINITY_DN422143_c0_g1_i1 (301 bp) by
tengwen2018 • 0
Dear TrentGenomics and dukecomeback, I have just encountered the same situations. Do you fix it?...
-
C: How to retrieve sets of protein sequences? by
RamRS ♦ 19k
It's Ensembl, there's no `e` at the end.
-
C: bash & quickGO to download gene symbols of a GO term by
Adrian Pelin • 2.2k
This is pretty sweet! Thanks!
-
C: Analysing two SNPs and their association with phenotypes, and co-occurence by
abdi_g96 • 0
What do you mean by how many independent tests? The sample size is ~1500 if I've understood you c...
-
C: annotation - biomaRt - getBM - multiple entrez ID by
Learner • 110
@Kevin Blighe instead the gene_name, please now try this one, you will see that you get error ...
-
C: How to retrieve sets of protein sequences? by
vkkodali • 690
If you just want to extract the IDs and not care about the order they are in then you can skip th...
-
C: Analysing two SNPs and their association with phenotypes, and co-occurence by
Kevin Blighe ♦ 33k
I see. So, how many independent tests are we talking about? - a few?; tens?; hundreds?; thousands...
-
C: Analysing two SNPs and their association with phenotypes, and co-occurence by
abdi_g96 • 0
So these SNPs have been highlighted by other studies as possibly having an implication in food al...
-
C: Split fastq according to barcodes by
genomax ♦ 59k
Index sequences are in both R1/R2 headers (see example you posted above). As suggested by @finswi...
-
C: Analysing two SNPs and their association with phenotypes, and co-occurence by
Kevin Blighe ♦ 33k
Can you elaborate on what exactly you want to do? Do you want to test *every* SNP as pairs?; or, ...
-
C: annotation - biomaRt - getBM - multiple entrez ID by
Kevin Blighe ♦ 33k
This is the first time that you mention *GO id*. What do you mean? Please try to explain in detai...
-
C: annotation - biomaRt - getBM - multiple entrez ID by
Learner • 110
@Kevin Blighe Kevin, how did you check for it? I checked the attributes but with no success. is t...
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 1139 users visited in the last hour