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<prev • 159 results • page 1 of 6 • next >
0
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How to download all searched SRA result data at once?
sra data-mining data mining download written 1 day ago by sratestimon • 0 • updated 1 day ago by timstuart • 30
18
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3
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20k
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9 follow
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Sra Format Usage - How To
sra fastq conversion written 4.6 years ago by Daniel • 40 • updated 2 days ago by gaughey • 0
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0
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76
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Retrieving SRA datasets for completed bacterial genomes
ncbi sra written 24 days ago by ThePresident • 40
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0
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109
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How to download raw data in batch from NCBI based on Series Accession number or Platform ID
sra written 5 weeks ago by biolab • 890 • updated 5 weeks ago by genomax ♦ 29k
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4
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1.6k
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6 follow
4
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SRX from SRR IDs
sra written 2.6 years ago by biorepine • 1.2k • updated 5 weeks ago by James Ashmore • 1.5k
2
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1
answer
111
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1
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Confusion in SRA submission
sra rna-seq written 6 weeks ago by arunprasanna83 • 10 • updated 6 weeks ago by genomax ♦ 29k
2
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2
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134
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2
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high duplicated level in SRA
sra alignment snp written 6 weeks ago by kk.mahsa • 40 • updated 6 weeks ago by agata88 • 580
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0
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121
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automated SRA annotaion/Accession List
ncbi sra run selector rna-seq written 7 weeks ago by cakesebastian • 0 • updated 7 weeks ago by genomax ♦ 29k
1
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1
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141
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1
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Extracting specific metadata from SRA runs
ncbi sra sradb genomics metadata written 7 weeks ago by Gon • 10 • updated 7 weeks ago by Pierre Lindenbaum ♦ 95k
2
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1
answer
213
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1
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fastq-dump timeout exhausted error
sra written 7 weeks ago by bxia • 80
10
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4
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11k
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6 follow
4
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Where Can I Get The Asperasoft Command Line Client Ascp
sra aspera written 4.8 years ago by Jeremy Leipzig ♦ 17k • updated 9 weeks ago by ososa • 0
6
votes
1
answer
175
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1
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SRR/ERR/DRR prefixes in SRA - What's the difference?
sra written 9 weeks ago by crawforc3 • 30 • updated 9 weeks ago by lh3 ♦ 30k
8
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1
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222
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1
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Weird fastq format
sra fastq format rna-seq written 9 weeks ago by tw30282 • 10 • updated 9 weeks ago by genomax ♦ 29k
5
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3
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741
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3
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SRA to fastq
sra fastq next-gen sequencing written 21 months ago by anjanaram1 • 70 • updated 10 weeks ago by arunprasanna83 • 10
0
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0
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155
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search SRA or ENA for targeted sequencing data
sra ena written 3 months ago by igor • 4.3k • updated 12 weeks ago by Biostar ♦♦ 20
3
votes
1
answer
263
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1
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Get a complete GSM-to-SRX/SRR table
geo sra gsm gse sradb written 3 months ago by predeus • 330 • updated 3 months ago by Gregor Sturm • 30
0
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1
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173
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1
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Cancer data for histone Chip-seq in human and mouse
geo sra cancer chip-seq histone written 3 months ago by Saad Khan • 310 • updated 3 months ago by Ben • 40
4
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1
answer
368
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1
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Tutorial: How to upload your RNA-Seq data to NCBI Sequence Read Archive (SRA)
ncbi sra tutorial biosample bioproject written 3 months ago by CandiceChuDVM • 1.1k • updated 3 months ago by igor • 4.3k
0
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228
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NCBI SRA submission: neither sample_name nor biosample_accession are set
ncbi sra sequence read archive rna-seq written 3 months ago by CandiceChuDVM • 1.1k
129
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8
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46k
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113 follow
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 2.8 years ago by Obi Griffith ♦ 15k • updated 4 months ago by al-ash • 0
4
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2
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234
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2
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Downloading data from Short Read Archive
sra short read archive written 4 months ago by cristian • 50 • updated 4 months ago by EagleEye • 4.1k
17
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3
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2.9k
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5 follow
3
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Aligning paired end fastq files dumped from SRA
sra fastq bwa mem paired written 2.6 years ago by Zev.Kronenberg ♦ 10k • updated 4 months ago by Christian • 2.5k
6
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2
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452
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5 follow
2
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Entrez API returns results different from main search?
python entrez sra written 4 months ago by Philipp Bayer ♦ 4.3k • updated 4 months ago by DCGenomics • 280
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280
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blastn_vdb "- Error opening the following db(s): "
wgs sra-toolkit blastn_vdb blast sra written 5 months ago by musta1234 • 10 • updated 5 months ago by Ram ♦ 11k
0
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1
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293
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1
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How many paired FASTQ reads to input for alignment if 4 different SRA IDs belong to one sample-whole genome?
sra alignment fastqs written 5 months ago by flight22121 • 10 • updated 5 months ago by Tom_L • 180
4
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3
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2.1k
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3
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sra toolkit error: path incorrect while opening manager within database module
sra fastq sratoolkit written 20 months ago by MarcinKosinski • 10 • updated 5 months ago by sourabhdattawad • 0
8
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4
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2.1k
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5 follow
4
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How can I find SRA MD5 checksums for FASTQ files?
checksum sra md5 written 2.0 years ago by rivanov • 40 • updated 5 months ago by genomax ♦ 29k
6
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1
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282
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1
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Find raw sequencing data used in the articles ?
sra next-gen sequence raw data sequencing written 5 months ago by tareq.sanabra • 0
5
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3
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865
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3
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Error while downloading data using SRA toolkit
sra download sra-toolkit error chip-seq written 5 months ago by bhardwaj1991 • 20 • updated 5 months ago by Chunjie Liu • 210
0
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0
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273
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0
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EBI SRA FTP is not working
ebi sra written 5 months ago by BAGeno • 20
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