Showing: starreset
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unexpectedly low speed of STAR aligner
star rna-seq written 1 day ago by nfursova.msu0 • updated 1 day ago by Devon Ryan68k
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111
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STAR Indexing problems with unassambled vertebrate genomes
gtf star rna-seq written 8 days ago by sergio.espeso-gil0 • updated 6 days ago by colindaven200
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6 follow
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STAR genomeLoad overlap conflict
genomeload cluster star rna-seq written 28 days ago by cakesebastian0 • updated 28 days ago by h.mon6.6k
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175
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Mapping RNA-Seq data on genome from another species
genome hisat2 star rna-seq mapping written 5 weeks ago by tlorin160 • updated 5 weeks ago by Brian Bushnell12k
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134
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Cannot Generate Genome from RNA Transcript in STAR
genomegenerate star rna-seq written 7 weeks ago by rekren10 • updated 7 weeks ago by Santosh Anand2.3k
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171
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1
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"Spikey" RNA-Seq coverage
alignment star rna-seq written 8 weeks ago by Walter Baumann0 • updated 8 weeks ago by Macspider1.2k
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How can I only took the mapped ones from STAR ?
genome star rna-seq samunmapped written 9 weeks ago by rekren10 • updated 9 weeks ago by andrew.j.skelton733.3k
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5 follow
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STAR command gets Killed
star mapping written 10 weeks ago by cakesebastian0
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STAR Alignment Trouble
alignment star rna-seq written 11 weeks ago by atcggcta0 • updated 11 weeks ago by Sergey Naumenko70
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Can STAR work with compressed .gz FASTQ input?
compressed fastq gz star alignment written 3 months ago by cristian50 • updated 3 months ago by Santosh Anand2.3k
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Long Read Length, yet STAR says many reads too short
single-cell alignment star rna-seq written 3 months ago by dec98620 • updated 3 months ago by datascientist28270
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145
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160
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Trimmomatic -> STAR
trimmomatic star rna-seq written 3 months ago by xd_d40
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Difference between GTF file with CHR and without CHR. ENSEMBL
ensembl star rna-seq written 8 months ago by rf10 • updated 3 months ago by Emily_Ensembl11k
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Error indexing genome with STAR
software error alignment star rna-seq written 3 months ago by zubenel0 • updated 3 months ago by WouterDeCoster19k
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5 follow
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STAR output processing
ase star rna-seq written 4 months ago by kintany0
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deseq dataset from star
deseq2 star rna-seq written 5 months ago by Pals1.3k • updated 5 months ago by bruce.moran210
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340
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Producing transcriptomic bam with STAR with all sam attributes
star rna-seq written 6 months ago by rubic130 • updated 6 months ago by Goutham Atla7.2k
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Quantification of Maps to rRNA and mtDNA
rrna alignment star mtrna rna-seq written 6 months ago by dec98620 • updated 6 months ago by Devon Ryan68k
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