Showing: starreset
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Read count difference between STAR and Bowtie
smallrna mirna-seq bowtie star written 5 days ago by hothriananya50 • updated 5 days ago by ATpoint11k
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RSEM with STAR aligment
star rsem written 5 days ago by prabin.dm30
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Do STAR genome index and RSEM reference need to be from same files?
rna-seq rsem star written 8 days ago by prabin.dm30 • updated 8 days ago by WouterDeCoster35k
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STAR alignment error: quantmod not found
rnaseq alignment star written 10 days ago by prabin.dm30 • updated 10 days ago by Devon Ryan86k
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Genome Index and Alignment- STAR
genome alignment star rna-seq written 17 days ago by carolgalah0 • updated 17 days ago by Kevin Blighe33k
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what do the headers of the rMATS output files mean?
next-gen star mats alternative splicing written 18 months ago by atcggcta10 • updated 5 weeks ago by drskm70
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Set the insert size threshold in STAR
star rna-seq written 3 months ago by alvarocentron910 • updated 6 weeks ago by Biostar ♦♦ 20
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147
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cause of unmapped short with STAR
star rna-seq written 6 weeks ago by lkianmehr30 • updated 6 weeks ago by swbarnes24.6k
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STAR RNA-seq aligned output ReadsPerGene.out.tab
star differential expression analysis rna-seq written 7 weeks ago by Boboboe10 • updated 7 weeks ago by h.mon21k
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best pipeline to get gene and transcript counts
count alignment star rna-seq hisat2 written 7 weeks ago by lkianmehr30 • updated 7 weeks ago by t.blasco9530
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how many index has to be constructed by STAR for TE analysis
tetoolkit star index written 8 weeks ago by lkianmehr30 • updated 8 weeks ago by h.mon21k
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To fetch the reads which are being partially mapped to the genome
jvarkit hisat2 star rna-seq bowtie2 written 8 weeks ago by swadha20 • updated 8 weeks ago by genomax59k
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How do I configure the read name output from STAR?
paired-end picard chip-seq star written 3.7 years ago by jgbradley190 • updated 9 weeks ago by RamRS19k
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cufflinks large bundles warning
cufflinks star written 10 weeks ago by Sam80
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341
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Allele Specific Expression Analysis
x chromosome snp star rna-seq allele specific written 11 weeks ago by Susmita Mandal0 • updated 11 weeks ago by grant.hovhannisyan1.3k
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Looking for chimp genome index (STAR)
chimpanzee chimp genomeindex star mapping written 11 weeks ago by raquelgarza9510 • updated 11 weeks ago by igor7.1k
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Tophat2 or STAR for IsoformSwitchAnalyzeR analysis
tophat cufflinks cuffdiff star written 11 weeks ago by sbbinfo0 • updated 11 weeks ago by kristoffer.vittingseerup1.0k
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[STAR] 255 Mapping Quality
star rna-seq mutect2 written 2.8 years ago by umn_bist320 • updated 12 weeks ago by RamRS19k
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