Showing: starreset
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bash script for RNA seq alignment with STAR
bash star rna-seq script written 8 days ago by nicole p0 • updated 8 days ago by Michael Dondrup42k
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26 follow
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Tool: Hera: A new tool for RNA-Seq analysis
star gene fusion tool rna-seq kallisto written 22 days ago by sonpham310 • updated 13 days ago by y.divyatej0
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167
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Does STAR identify new splicing?
alignment star rna-seq written 14 days ago by zhangzhenyusz20 • updated 14 days ago by h.mon8.0k
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choosing a suitable max intron size for STAR (plant alignment)
intron size plants star written 12 months ago by Biogeek240 • updated 22 days ago by claudiorivero920
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143
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Mapping Quality of reads with mismatches in STAR
rnaseq star mapq written 25 days ago by grant.hovhannisyan120 • updated 25 days ago by Devon Ryan70k
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159
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203
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STAR Aligner Suddently changed output file???
unix alignment rna 2pass star written 5 weeks ago by jack.baines20 • updated 5 weeks ago by h.mon8.0k
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144
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unexpectedly low speed of STAR aligner
star rna-seq written 7 weeks ago by nfursova.msu0 • updated 7 weeks ago by Devon Ryan70k
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STAR Indexing problems with unassambled vertebrate genomes
gtf star rna-seq written 8 weeks ago by sergio.espeso-gil0 • updated 8 weeks ago by colindaven260
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What happens during seed stitching when STAR initially gets the wrong MMP?
star rna-seq written 10 weeks ago by eric.kern1390 • updated 10 weeks ago by Santosh Anand2.8k
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6 follow
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STAR genomeLoad overlap conflict
genomeload cluster star rna-seq written 11 weeks ago by cakesebastian0 • updated 11 weeks ago by h.mon8.0k
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5 follow
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Mapping RNA-Seq data on genome from another species
genome hisat2 star rna-seq mapping written 3 months ago by tlorin170 • updated 3 months ago by Brian Bushnell13k
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Cannot Generate Genome from RNA Transcript in STAR
genomegenerate star rna-seq written 3 months ago by rekren10 • updated 3 months ago by Santosh Anand2.8k
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207
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"Spikey" RNA-Seq coverage
alignment star rna-seq written 3 months ago by Walter Baumann0 • updated 3 months ago by Macspider1.2k
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How can I only took the mapped ones from STAR ?
genome star rna-seq samunmapped written 4 months ago by rekren10 • updated 4 months ago by andrew.j.skelton733.6k
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5 follow
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STAR command gets Killed
star mapping written 4 months ago by cakesebastian0
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STAR Alignment Trouble
alignment star rna-seq written 4 months ago by atcggcta0 • updated 4 months ago by Sergey Naumenko170
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Can STAR work with compressed .gz FASTQ input?
compressed fastq gz star alignment written 4 months ago by cristian70 • updated 4 months ago by Santosh Anand2.8k
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Long Read Length, yet STAR says many reads too short
single-cell alignment star rna-seq written 4 months ago by dec98620 • updated 4 months ago by datascientist28290
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Trimmomatic -> STAR
trimmomatic star rna-seq written 5 months ago by xd_d60
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