Showing: starreset
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deseq dataset from star
deseq2 star rna-seq written 9 days ago by Pals1.3k • updated 9 days ago by bruce.moran140
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Producing transcriptomic bam with STAR with all sam attributes
star rna-seq written 28 days ago by rubic100 • updated 28 days ago by Goutham Atla6.7k
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Quantification of Maps to rRNA and mtDNA
rrna alignment star mtrna rna-seq written 5 weeks ago by dec9860 • updated 5 weeks ago by Devon Ryan60k
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Running multiQC on more than one file Log.final.out from STAR
star multiqc written 3 months ago by cristian20 • updated 6 weeks ago by Phil Ewels10
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[STAR] 255 Mapping Quality
star rna-seq mutect2 written 10 months ago by umn_bist210 • updated 7 weeks ago by zeyuchen20160
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STAR aligner fails to produce unmapped file
star written 8 weeks ago by dec9860 • updated 8 weeks ago by WouterDeCoster11k
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generating genome indexes with STAR
star rna-seq written 6 months ago by snp8730 • updated 8 weeks ago by aleferna0
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Pre made STAR Index?
star written 9 weeks ago by atcggcta0 • updated 9 weeks ago by dvanic150
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RNA-seq quality control
next-gen alignment qc star rna-seq written 9 weeks ago by Ron480 • updated 9 weeks ago by Devon Ryan60k
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Problem installing STAR on Mac OSX
installation aligner star written 10 weeks ago by cristian20 • updated 10 weeks ago by khericlim280
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STAR can not detect this chimeric read
fusion star rna-seq written 4 months ago by NicoBxl4.6k • updated 10 weeks ago by Biostar ♦♦ 10
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RNA-seq: Explain STAR quantMode geneCounts values
star rna-seq differential expression written 12 weeks ago by williantafsilva0 • updated 12 weeks ago by Rohit900
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Recommended doc for interpreting STAR alignment stats
alignment star rna-seq written 12 weeks ago by emblake30 • updated 12 weeks ago by Jeffin Rockey240
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STAR-RSEM RNA-seq pipeline is deterministic?
star rsem rna-seq written 3 months ago by a.e.c10 • updated 3 months ago by datascientist28210
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Difference between GTF file with CHR and without CHR. ENSEMBL
star rna-seq written 3 months ago by rf0 • updated 3 months ago by mastal5111.3k
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How to know intron lenghts
intron star rna-seq written 4 months ago by jmramos.bio10 • updated 4 months ago by i.sudbery970
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(Modern, mid-2016) RNA-seq software pipeline
software tophat cufflinks star rna-seq written 8 months ago by jp90 • updated 4 months ago by tangming20051.8k
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where can I find more data about --outSAMattributes All?
samtools star rna-seq written 4 months ago by blur20 • updated 4 months ago by Pierre Lindenbaum88k
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rRNA detection (for contamination) in RNA-seq
next-gen alignment star rna-seq written 4 months ago by Ron480 • updated 4 months ago by igor3.1k
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STAR BAM into RSEM
forward-prob star rsem written 4 months ago by Biogeek230 • updated 4 months ago by Devon Ryan60k
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