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What software is designed to do human identity analysis applying CODIS and other panels of forensically relevant genome biomarkers?

str forensic human identity codis written 9 months ago by mathisdead • 10 • updated 12 days ago by griley5000 • 0

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171

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Are there any STR and other forensic genomics references packages to use them for alignment against a complete genome of a suspect?

str forensic suspect written 9 months ago by mathisdead • 10

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929

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Where are examples of Interspersed repeats?

ministatellite str repeats sequence written 20 months ago by veronicaschroeder78 • 100

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636

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Tool for Converting STR Sequence Data to Bracketed Sequence

str next-gen sequence tool written 2.4 years ago by lattarulol • 0 • updated 2.4 years ago by Michael Dondrup ♦ 45k

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714

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Parameters cutoff for extraction of TRUE Short Tandem Repeats (STR) from lobSTR result

str short tandem repeat genotyping written 3.3 years ago by Louis Kok • 10 • updated 3.2 years ago by Biostar ♦♦ 20

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1.0k

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STR (short tandem repeats) ID from bam file?

str bam written 3.7 years ago by Richard • 550

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2.3k

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PGDSpider command line can't find pop file?

vcf str snp software error written 4.4 years ago by a.cardilini • 0 • updated 4.4 years ago by Devon Ryan ♦ 86k

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Recent Replies

A: Comparing NCI-60 transcriptome with another variable to determine genes that cor by cannin • 250
You can use the rcellminer R package: http://bioconductor.org/packages/release/bioc/vignettes/rc...
A: Biopython error message: Protein FASTA provided for nucleotide sequence by marcobgg4 • 0
Hi, hope i can be of some help even this late. The mistake is quite simple and i have done it mys...
C: Error in Calculation of Ka/Ks value using Ka/Ks calculator by katerinapargana • 0
Were you able to make it work in the end? I removed the piece of code that ashatan.314 noted as t...
C: Ensembl Biomart Allele Frequency for different ethnicity by genomax ♦ 59k
Tagging: https://www.biostars.org/u/7019/
C: Bedtools coverage confuses chromosomes by Jeffin Rockey • 1000
Check the separators. MT is there in EHMT1 . Is the bed made in a Windows machine or so? If so d...
C: An error when running ABSOLUTE by ATpoint ♦ 11k
This, as well as your other question (https://www.biostars.org/p/355162/) lacks any details. Plea...
C: Identifiyng mutual trends between treatments by uriamo • 0
I'll do that. but as long is Biostars will not parse that latex code, I can't see how it makes it...
C: Convert MAF to FASTA by tim.ivanov.92 • 10
Thank you for the second link - i'll look into it Do you mb know how to get complete UCSC fasta ...
C: Convert MAF to FASTA by tim.ivanov.92 • 10
Does it considerer blocks inside an alignment? cos thats the whole problem - different blocks may...
C: Identifiyng mutual trends between treatments by genomax ♦ 59k
You can use the formatting bar (especially the `code` option). $x=log_{2}\left(\text{fold...
C: help regarding abyss assembly by praasu • 10
Meanwhile, I just notice that contig file (protista-3.fa) and unitigs file (protista-unitigs.fa)...
C: Bedtools coverage confuses chromosomes by wsciekly.maciek • 0
I have added the command above; Well, it should be but my bed file does not have MT entries...

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