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written 21 months ago by
lattarulol • 0
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21 months ago by
Michael Dondrup ♦ 43k
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written 3.7 years ago by
a.cardilini • 0
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3.7 years ago by
Devon Ryan ♦ 78k
Recent Votes
- C: Is There A Fast Hashing Function For Nucleotide K-Mers (Q-Grams)?
- errors in newCellDataSet Monocle function
- C: Problem with Tophat / Bowtie pipeline
- C: GC count calculation of thousnds genes in several region
- A: What Is The Typical Density Of Heterozygous Alleles In A Diploid Human Genome?
- A: What Is The Typical Density Of Heterozygous Alleles In A Diploid Human Genome?
- C: RNA-Seq identify stably expressed genes
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Recent Replies
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C: Questions about quantifying mRNA data by
kamel • 0
Thank you for your answer I will try to use them. what do you think about the software mmquant ??
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C: Poor Output from Spades with High Coverage Input Data by
callamartyn • 0
Thanks so much, I will definitely try the normalization!
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C: Poor Output from Spades with High Coverage Input Data by
callamartyn • 0
Thanks so much, I finally got spades to work but am curious about metaVIC and will try it as well!
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C: Poor Output from Spades with High Coverage Input Data by
callamartyn • 0
Thanks so much! I tried a few different amounts of reads and got it to work. For anyone else who ...
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A: error in star by
genomax ♦ 46k
You can't use wrong type of file. `/home/administrator/human/GCA_000001405.15_GRCh38_no_alt_analy...
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C: How to Deal With Multiple ZFIN_IDs by
sallehl • 0
Hi Emily, Thanks for the reply, sorry, I meant to add my R script into my original question bu...
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C: RNA-Seq identify stably expressed genes by
Kevin Blighe ♦ 17k
Pretty much just to agree with geek and h.mon here. I would have suggested to look at genes with ...
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C: RNA-Seq identify stably expressed genes by
Kevin Blighe ♦ 17k
If it's not for normalisation, I trust that you are nevertheless normalising your data in the nor...
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C: Strategy help: searching for potential gene degradation (domestication) by
Kevin Blighe ♦ 17k
Your question is vague, so, here's a vague comment: why not perform RNA-seq on your samples and t...
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C: RNA-Seq identify stably expressed genes by
h.mon ♦ 13k
https://www.biostars.org/u/4067/ suggestion seems the way to go. In addition, you could also filt...
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C: GC count calculation of thousnds genes in several region by
Kevin Blighe ♦ 17k
Also one from Aaron Quinlan, BEDTools developer: https://www.biostars.org/p/47047/
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C: RNA-Seq identify stably expressed genes by
h.mon ♦ 13k
Intuitively, I would say no, one tissue can't be used as a proxy for another - they are different...
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