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written 17 months ago by
Pierre Lindenbaum ♦ 131k
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written 2.3 years ago by
waqasnayab • 200
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2.3 years ago by
Kevin Blighe ♦ 68k
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written 3.7 years ago by
thomas.welch • 40
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Brian Bushnell ♦ 17k
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Recent Replies
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C: How to count the number of alignments in a bam file without using samtools? by
steve • 2.6k
dont think I have ever seen a case where people actually use uncompressed bam file, at that point...
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C: Explore CNV data from illumina Array by
melania 2282 • 100
Thank you, but PennCNV have a very special input, do you know any other program that i can test i...
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C: ClinVar Summary vs. VCF by
_r_am ♦ 31k
> joining my table ... by genomic co-ordinates Please tell us exactly how you're doing it. Th...
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C: How to create a SNP VCF file? by
evolozzy • 10
Do you need specifically the SNPs?
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C: From bedgraph to bigwig by
jared.andrews07 ♦ 8.0k
Please don't post comments as answers, instead use the "Add Reply" and "Add Comment" buttons as a...
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A: SNPEff output meaning by
evolozzy • 10
It is actually TGA, which is the stop codon, and G is deleted so it says deletion of G on Ter(min...
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A: GC content by c programming by
Alex Reynolds ♦ 31k
Read in DNA sequence into a `char *` and loop over each character: unsigned int gc = 0; ...
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C: De Novo RNA Seq Assembly, Spurious Isoforms? by
jer364 • 0
Thank you! This was very helpful!
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C: De Novo RNA Seq Assembly, Spurious Isoforms? by
GenoMax ♦ 92k
> mining viruses in RNA Seq data Can you clarify how you are doing that?
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A: De Novo RNA Seq Assembly, Spurious Isoforms? by
lieven.sterck ♦ 9.0k
I'm not an expert in viruses but in other organisms this does not have to be the case. Isoform as...
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C: Differential analysis isoform level or gene level ? by
agtbeeman • 0
Ok thanks ! I just found it a bit surprising, I would have expected it took into account some oth...
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C: GPL6883_HumanRef-8_V3_0_R0_11282963_A (illumina expression beadchip) by
daniela.paola.s.p • 30
I fixed the mistakes... now, when I run: ---------- >targets <- factor(targets$group) >...
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