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2
votes
1
answer
145
views
1
answer
Strand specific in RNA-seq
featurecounts subread rna-seq written 11 weeks ago by swarajgaikwad15 • 0 • updated 11 weeks ago by caggtaagtat • 430
0
votes
0
answers
834
views
0
answers
Using the align() function of the Rsubread package; error: unrecognized option `--gtfFeature'
next-gen seq ngs rsubread subread alignment written 22 months ago by cristian • 180 • updated 6 months ago by RamRS ♦ 20k
0
votes
1
answer
338
views
1
answer
featureCounts fails to reorder BAM and duplicates read counts
featurecounts subread rna-seq written 7 months ago by samuel.marsh • 0 • updated 7 months ago by Devon Ryan ♦ 88k
0
votes
1
answer
876
views
1
answer
How to increase the speed of subread for DNA whole genome sequence
speed dna sequence subread written 2.4 years ago by tarek.mohamed • 240 • updated 9 months ago by andysw90 • 20
0
votes
0
answers
1.1k
views
0
answers
Reads not assigned to features in featureCounts software
featurecounts subread written 22 months ago by James Ashmore • 2.6k
4
votes
2
answers
794
views
2
answers
RNA-Seq read alignment using subread gives error.
subread rna-seq written 2.2 years ago by Sumit Paliwal • 20 • updated 2.2 years ago by WouterDeCoster ♦ 36k
0
votes
1
answer
1.4k
views
1
answer
"featureCounts" of "subRead" does not work with ensembl.gft
gtf ensembl subread rna-seq written 2.4 years ago by alakatos • 0 • updated 2.4 years ago by eldronzhou • 350
3
votes
1
answer
974
views
1
answer
Subread average running time
subjunc subread rna-seq written 3.1 years ago by Jarretinha ♦ 3.3k
1
vote
1
answer
3.3k
views
1
answer
featureCounts duplicate counting
rnaseq duplicates featurecounts subread written 4.6 years ago by lkmklsmn • 860 • updated 4.6 years ago by dbpzdbpz • 90
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