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6
votes
2
answers
388
views
2
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Subset Fastq file from list of read numbers
reads fastq subset written 7 months ago by johnsonn5730 • updated 7 months ago by Pierre Lindenbaum129k
1
vote
1
answer
213
views
1
answer
0
votes
1
answer
240
views
1
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How to subset bamfile based on chromosome IDs
bam freebayes subset written 9 months ago by mernster0 • updated 9 months ago by ATpoint36k
0
votes
0
answers
329
views
0
answers
extracting a subset of probes from an expression object
probes exprs microarray subset written 13 months ago by RNAseqer 130 • updated 11 months ago by Biostar ♦♦ 20
2
votes
1
answer
238
views
1
answer
Subsetting a wide dataframe in R with respect to common "trends" in values
R nested-loop subset written 11 months ago by rekren20 • updated 11 months ago by zx87549.4k
4
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1
answer
300
views
1
answer
1
vote
0
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425
views
0
answers
3
votes
2
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2.6k
views
5 follow
2
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Subset multiple columns in R or unix
pull subset columns subset columns R written 15 months ago by julie.sawitzke0 • updated 15 months ago by RamRS27k
1
vote
1
answer
1.9k
views
1
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DESeq2: subset dds or vsd to plot PCA with specific genes only
R deseq2 plotpca rna-seq subset written 15 months ago by Cece0 • updated 15 months ago by Kevin Blighe61k
5
votes
2
answers
1.2k
views
5 follow
2
answers
How to subset reads from fastq file to use as test file on a script
bash fastq sample subset written 17 months ago by msimmer92250 • updated 17 months ago by baranserhatozer0
3
votes
1
answer
1.7k
views
1
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4
votes
1
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460
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1
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Subset top 5% values of data frames stored in list
R subset written 19 months ago by paolo002160 • updated 19 months ago by zx87549.4k
16
votes
5
answers
681
views
9 follow
5
answers
Get genotype GT from multi-sample VCF (per chromosome)
vcf bcftools genotype subset written 20 months ago by zx87549.4k • updated 20 months ago by Pierre Lindenbaum129k
2
votes
1
answer
471
views
1
answer
10
votes
2
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523
views
5 follow
2
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Keep rows with different signs in two columns
R subset written 21 months ago by paolo002160 • updated 21 months ago by zx87549.4k
2
votes
1
answer
988
views
1
answer
2
votes
2
answers
1.5k
views
2
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subset gtf file based on coordinates
gtf bed genomic ranges rna-seq subset written 2.4 years ago by Assa Yeroslaviz1.3k • updated 2.4 years ago by ATpoint36k
9
votes
1
answer
1.4k
views
5 follow
1
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Subset VCF file by comparing CHROM,POS,REF and ALT
vcf subset written 2.6 years ago by RamRS27k • updated 2.6 years ago by Pierre Lindenbaum129k
3
votes
3
answers
2.5k
views
3
answers
Using Plink, get allele frequencies for a subset of individuals
individuals plink subset written 2.8 years ago by Mr Locuace100 • updated 2.8 years ago by pfs270
0
votes
0
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3.0k
views
0
answers
4
votes
1
answer
1.2k
views
1
answer
0
votes
1
answer
3.0k
views
1
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Repeat Modeler sampling workings?
recon repeatscout sampling repeatmodeler subset written 5.7 years ago by Lesley Sitter490 • updated 5.2 years ago by Craig Jackson30
3
votes
2
answers
3.0k
views
2
answers
1
vote
1
answer
1.2k
views
1
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perl, extract every 40th seg but stop after getting 300,000 sequence
perl limit subset written 5.6 years ago by cara7810 • updated 5.6 years ago by Jorge Amigo11k
2
votes
3
answers
1.5k
views
3
answers
subset fastq file
fastq subset written 5.7 years ago by cara7810 • updated 5.7 years ago by smilefreak420
5
votes
1
answer
2.6k
views
5 follow
1
answer
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