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6
votes
2
answers
491
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2
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Subset Fastq file from list of read numbers
reads fastq subset written 11 months ago by johnsonn5730 • updated 11 months ago by Pierre Lindenbaum131k
1
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1
answer
249
views
1
answer
0
votes
1
answer
298
views
1
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How to subset bamfile based on chromosome IDs
bam freebayes subset written 12 months ago by mernster0 • updated 12 months ago by ATpoint40k
0
votes
0
answers
373
views
0
answers
extracting a subset of probes from an expression object
probes exprs microarray subset written 17 months ago by RNAseqer 140 • updated 14 months ago by Biostar ♦♦ 20
2
votes
1
answer
288
views
1
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Subsetting a wide dataframe in R with respect to common "trends" in values
R nested-loop subset written 15 months ago by rekren20 • updated 15 months ago by zx87549.7k
4
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1
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336
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1
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1
vote
0
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542
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0
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3
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2
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3.5k
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5 follow
2
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Subset multiple columns in R or unix
pull subset columns subset columns R written 19 months ago by julie.sawitzke0 • updated 19 months ago by RamRS30k
1
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1
answer
2.4k
views
1
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DESeq2: subset dds or vsd to plot PCA with specific genes only
R deseq2 plotpca rna-seq subset written 19 months ago by Cece0 • updated 19 months ago by Kevin Blighe66k
5
votes
2
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1.6k
views
5 follow
2
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How to subset reads from fastq file to use as test file on a script
bash fastq sample subset written 21 months ago by msimmer92260 • updated 20 months ago by baranserhatozer0
3
votes
1
answer
2.2k
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1
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4
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1
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519
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1
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Subset top 5% values of data frames stored in list
R subset written 22 months ago by paolo002160 • updated 22 months ago by zx87549.7k
16
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5
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838
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9 follow
5
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Get genotype GT from multi-sample VCF (per chromosome)
vcf bcftools genotype subset written 23 months ago by zx87549.7k • updated 23 months ago by Pierre Lindenbaum131k
2
votes
1
answer
510
views
1
answer
10
votes
2
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559
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5 follow
2
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Keep rows with different signs in two columns
R subset written 2.1 years ago by paolo002160 • updated 2.0 years ago by zx87549.7k
2
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1
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1.1k
views
1
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2
votes
2
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1.7k
views
2
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subset gtf file based on coordinates
gtf bed genomic ranges rna-seq subset written 2.7 years ago by Assa Yeroslaviz1.4k • updated 2.7 years ago by ATpoint40k
9
votes
1
answer
1.5k
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6 follow
1
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Subset VCF file by comparing CHROM,POS,REF and ALT
vcf subset written 2.9 years ago by RamRS30k • updated 2.9 years ago by Pierre Lindenbaum131k
3
votes
3
answers
2.7k
views
3
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Using Plink, get allele frequencies for a subset of individuals
individuals plink subset written 3.1 years ago by Mr Locuace100 • updated 3.1 years ago by pfs280
0
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0
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3.4k
views
0
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4
votes
1
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1.3k
views
1
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0
votes
1
answer
3.1k
views
1
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Repeat Modeler sampling workings?
recon repeatscout sampling repeatmodeler subset written 6.0 years ago by Lesley Sitter540 • updated 5.5 years ago by Craig Jackson30
3
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2
answers
3.1k
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2
answers
1
vote
1
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1.3k
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1
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perl, extract every 40th seg but stop after getting 300,000 sequence
perl limit subset written 5.9 years ago by cara7810 • updated 5.9 years ago by Jorge Amigo12k
2
votes
3
answers
1.6k
views
3
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subset fastq file
fastq subset written 6.0 years ago by cara7810 • updated 6.0 years ago by smilefreak420
5
votes
1
answer
2.7k
views
5 follow
1
answer
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