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Batch effect for SNP array
sva combat snp batch effect written 21 days ago by Taylor9510 • updated 20 days ago by Biostar ♦♦ 20
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sva + egdeR - differential expression analysis - RNA-seq data
sva rna-seq edger written 4.2 years ago by mrodrigues.fernanda40 • updated 10 weeks ago by Biostar ♦♦ 20
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sva combat removes wanted biological variation
R sva combat rna-seq pca written 13 months ago by exin50 • updated 3 months ago by Biostar ♦♦ 20
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Strong covariates and weak biological signal in transcriptomes
R sva written 8 months ago by Agustin Gonzalez-Vicente50 • updated 8 months ago by zx87549.0k
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Principal component analysis of SVA's surrogate variables
sva stdev surrogate variables written 9 months ago by RNAseqer 130 • updated 9 months ago by geek_y10k
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sva pprob.b all 0s?
R sva pprob.b microarray written 9 months ago by RNAseqer 130
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Question about sva + edgeR to identify differentially expressed genes
sva edger written 11 months ago by tujuchuanli60 • updated 11 months ago by ATpoint30k
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svaseq and combat
combat sva effect batch written 2.8 years ago by Folder40g120 • updated 11 months ago by liull_hust0
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removing batch effects using ComBat and SVA
R sva combat batch effect written 3.7 years ago by LJ210 • updated 12 months ago by Agustin Gonzalez-Vicente50
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sva correction for MEDIPS
medip-seq sva svaseq medips written 13 months ago by tofukaj0
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ComBat correction with one batch containing only one sample - keep or remove?
proteome sva combat R written 15 months ago by hesse.sebastian80 • updated 13 months ago by Biostar ♦♦ 20
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sva output interpretation
sva rna-seq written 17 months ago by elb170 • updated 17 months ago by Devon Ryan94k
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Help with multiple batch effects
sva batch effects combat written 20 months ago by fp8920 • updated 20 months ago by genomax78k
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Batch effect correction
sva combat matlab written 21 months ago by gstavropoulos199110
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Surrogate variable analysis: ask for a practical example
sva rna-seq written 22 months ago by Mozart140 • updated 22 months ago by RamRS25k
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RNAseq sva-seq drops number of DE genes?
R sva svaseq rna-seq written 22 months ago by brismiller20 • updated 22 months ago by Kevin Blighe55k
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Batch effects : ComBat or removebatcheffects (limma package) ?
sva batch effects combat limma written 2.6 years ago by lessismore750 • updated 2.3 years ago by Kevin Blighe55k
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RNA-Seq Batch correction negative values
batch-effect combat scran rna-seq sva written 2.4 years ago by rmf900 • updated 2.4 years ago by Kevin Blighe55k
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