Showing: svareset
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4
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428
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sva combat removes wanted biological variation
R sva combat rna-seq pca written 10 months ago by exin50 • updated 20 days ago by Biostar ♦♦ 20
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86
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3
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147
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2
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249
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1
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0
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192
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Strong covariates and weak biological signal in transcriptomes
R sva written 6 months ago by Agustin Gonzalez-Vicente50 • updated 5 months ago by zx87548.7k
6
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1
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291
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1
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2
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1
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329
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1
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Principal component analysis of SVA's surrogate variables
sva stdev surrogate variables written 6 months ago by RNAseqer 110 • updated 6 months ago by geek_y10k
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245
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0
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170
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sva pprob.b all 0s?
R sva pprob.b microarray written 7 months ago by RNAseqer 110
3
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1
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517
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1
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0
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0
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414
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Question about sva + edgeR to identify differentially expressed genes
sva edger written 8 months ago by tujuchuanli50 • updated 8 months ago by ATpoint26k
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2.0k
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svaseq and combat
combat sva effect batch written 2.6 years ago by Folder40g120 • updated 8 months ago by liull_hust0
12
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1
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13k
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1
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removing batch effects using ComBat and SVA
R sva combat batch effect written 3.5 years ago by LJ180 • updated 10 months ago by Agustin Gonzalez-Vicente50
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230
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sva correction for MEDIPS
medip-seq sva svaseq medips written 10 months ago by tofukaj0
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0
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400
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0
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ComBat correction with one batch containing only one sample - keep or remove?
proteome sva combat R written 12 months ago by hesse.sebastian80 • updated 10 months ago by Biostar ♦♦ 20
1
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344
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0
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3
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1
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444
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5 follow
1
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sva output interpretation
sva rna-seq written 14 months ago by elb170 • updated 14 months ago by Devon Ryan93k
6
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1
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1.3k
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1
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1
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1
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1.3k
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1
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Help with multiple batch effects
sva batch effects combat written 17 months ago by fp8920 • updated 17 months ago by genomax75k
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343
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1
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1
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644
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Batch effect correction
sva combat matlab written 18 months ago by gstavropoulos199110
1
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774
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0
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6
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1
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1.0k
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5 follow
1
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Surrogate variable analysis: ask for a practical example
sva rna-seq written 19 months ago by Mozart140 • updated 19 months ago by RamRS25k
3
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1
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935
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1
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RNAseq sva-seq drops number of DE genes?
R sva svaseq rna-seq written 19 months ago by brismiller10 • updated 19 months ago by Kevin Blighe52k
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1.1k
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1
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1.1k
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0
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18
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1
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11k
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14 follow
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Batch effects : ComBat or removebatcheffects (limma package) ?
sva batch effects combat limma written 2.3 years ago by lessismore710 • updated 2.1 years ago by Kevin Blighe52k
7
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1
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2.0k
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6 follow
1
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RNA-Seq Batch correction negative values
batch-effect combat scran rna-seq sva written 2.2 years ago by rmf750 • updated 2.2 years ago by Kevin Blighe52k
10
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3.5k
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6 follow
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0
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1
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1.4k
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SVA analysis output R
R sva rna-seq written 2.2 years ago by robertt_bw0 • updated 2.2 years ago by lessismore710
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