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written 14 months ago by
bioming • 0
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14 months ago by
WouterDeCoster ♦ 42k
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written 3.3 years ago by
gabriela.ribeiro.br • 10
• updated
3.3 years ago by
genomax ♦ 76k
Recent Votes
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- A: how to find the conserved region in two or more genomes
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Recent Replies
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C: Functional Metagenomic Analysis Tools by
metageni • 60
No problem. I'm more than happy to add new features that you may wish.
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C: Genomic Restriction Finder by
wangyanepi • 0
Hi Pierre, I am glad to find your Biostar86480. It looks great to get the enzyme position. But ...
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C: PCA vs ICA prior to t-SNE or UMAP by
Jean-Karim Heriche ♦ 21k
PCA finds orthogonal directions along which the variance is maximal. Orthogonality means that the...
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C: issues using Value Matching command in R by
zx8754 ♦ 8.8k
So it is not a *CSV* file. Not sure what we are trying to do, if we are trying to subset based on...
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C: PVCA message: boundary (singular) fit: see ?isSingular by
Jean-Karim Heriche ♦ 21k
Usually one should investigate such warnings to understand if the output of the analysis is relia...
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C: only unique mapped paired-end reads by
gb • 1.3k
Think second is better, you are already doing ` -F 2316`. You could change this to `2317` or `2319`
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C: how to find the conserved region in two or more genomes by
zhangdengwei • 50
Thanks. I found `Mugsy` was competent for this. I will try to use `Mauve` later.
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A: ABySS Bloom filter false positive rate by
metageni • 60
Looks a like a question for https://github.com/bcgsc/abyss/issues
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C: PCA vs ICA prior to t-SNE or UMAP by
CY • 460
> the only relevant components to explain the variability in the data are the uncorrelated one...
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C: How to plot 2 different symbols in a 3D PCA plot generated by rgl-plot3D by
maria2019 • 80
True! thanks for your comment. I just tried it. The problem with plot3D is that I cannot rotate t...
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A: Design matrix for voom: with or without batch blocking? by
Gordon Smyth • 1.3k
See Chapter 15 (RNA-seq Data) in the limma User's Guide. The comments there apply to proteomics c...
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A: limma voom problem by
Gordon Smyth • 1.3k
The design matrix needs to have fewer columns than rows, preferably much fewer columns than rows....
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