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<prev • 145 results • page 1 of 5 • next >
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Kaiju or MetaPhlAn2?
kaiju taxonomy metaphlan2 metagenomics written 27 days ago by shibl_a • 10
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Annotation of assembled metagenomic data
metagenomics taxonomy written 4 weeks ago by lagartija • 30 • updated 4 weeks ago by Juke-34 • 1.8k
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all by all phylogenetic distances for massive set of ncbi taxon ID's
phylogeny ncbi taxonomy taxon id microbiology written 6 weeks ago by bioguy • 20 • updated 6 weeks ago by i.sudbery ♦ 3.7k
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5 follow
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Add taxonomy information of fileA to species list in fileB
metagenomics taxonomy written 10 weeks ago by mariep92 • 0 • updated 10 weeks ago by shenwei356 ♦ 4.5k
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SILVA taxonomy ranks
16s taxonomy silva written 12 weeks ago by gb • 590 • updated 11 weeks ago by Carambakaracho • 750
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183
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Filter by Tax Rank in Kegg API
rest api taxonomy kegg written 3 months ago by dllopezr • 40
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How to query taxonomy ID using protein accession ID in NCBI or Uniprot?
ncbi taxonomy uniprot written 3 months ago by johnnytam100 • 100
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Nested Bubble Plots
taxonomy bubble plots written 3 months ago by ladypurrsia • 20 • updated 3 months ago by h.mon ♦ 23k
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Ncbi Taxonomy Database In Xml Format
xml taxonomy written 5.4 years ago by Ctanes • 70 • updated 3 months ago by Biostar ♦♦ 20
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Closest Related Bacterial Species
genome phylogenetics taxonomy written 7.3 years ago by Greg • 50 • updated 3 months ago by Biostar ♦♦ 20
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299
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Can I convert a species to otu?
otu 16s taxonomy written 13 months ago by jeremy.cox.2 • 90 • updated 4 months ago by biokoala ♦ 3.6k
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363
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NCBI edirect efetch error
software error ncbi taxonomy written 4 months ago by Inquisitive8995 • 40 • updated 4 months ago by h.mon ♦ 23k
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Taxonomy problems on algae: Is Cryptophyta a Phylum or a Class rank?
ncbi algaebase cryptophyta taxonomy phylum written 6 months ago by christophe.djemiel • 0 • updated 5 months ago by Biostar ♦♦ 20
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6 follow
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NCBI Taxonomy Comparison
taxonomy tree comparison written 8.6 years ago by Yannick Wurm • 2.3k • updated 5 months ago by RamRS ♦ 20k
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5 follow
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Taxonomy Of Blast Hits
taxonomy blast written 9.0 years ago by Darked89 ♦ 4.2k • updated 5 months ago by RamRS ♦ 20k
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Opinion on best way to taxonomically classify a genome
genome orthologs taxonomy phylogenomics written 5 months ago by msobol • 10 • updated 5 months ago by Carambakaracho • 750
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Tutorial: Getting the lineage of an organism from NCBI taxonomy data
python tutorial taxonomy biosql written 6 months ago by Vimalkumar Velayudhan • 190
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10 follow
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Looking For A Command Line Version Of Ncbi Taxonomy 'Stratification' Tool
ncbi taxonomy pipeline tool blast written 7.1 years ago by Daniel • 3.7k • updated 6 months ago by gtrwst9 • 0
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Software for Taxonomic Profiling of Fungi
metagenomics taxonomy metagenomic fungi written 6 months ago by bhanratt • 20 • updated 6 months ago by toralmanvar • 750
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Make taxonomy bar plot using qiime2 and error in denoise procedure and training classifier
denoise bar plot taxonomy metagenome qiime2 written 6 months ago by pple2202 • 0
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From NCBI Taxonomy to 16s RNA (automated)
taxonomy 16s rna written 7 months ago by Benni • 20
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BLAST taxid to complete linage using biopython on a local machine.
taxonomy biopython blast parsng written 10 months ago by lp.vandergouw • 0 • updated 8 months ago by Biostar ♦♦ 20
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What are the industry-leading methods of benchmarking metagenomics taxonomy identification?
metagenomics taxonomy written 9 months ago by JacobS • 890 • updated 8 months ago by Biostar ♦♦ 20
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Taxonomy assignment from draft genome
genome taxonomy whole genome fungi written 8 months ago by msobol • 10 • updated 8 months ago by biokoala ♦ 3.6k
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FASTA file with taxid, want to obtain lineage and put into header
fasta ncbi taxdump taxonomy written 8 months ago by mariahaguiar001 • 0 • updated 8 months ago by Chris S. • 290
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Phylogeny tree from a set of taxa
taxa species phylogenetic tree newick taxonomy written 8 months ago by neutrinoscientist • 0 • updated 8 months ago by Jean-Karim Heriche ♦ 18k
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Phylogeny Tree based on SILVA classification
taxonomy written 8 months ago by neutrinoscientist • 0 • updated 8 months ago by Chirag Parsania • 1.3k
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For a given set of NCBI taxonomy ids / species names, how to derive their species to species distance matrix ?
phylogeny species distance taxonomy written 9 months ago by Chirag Parsania • 1.3k
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Getting taxid from accession number
taxid efetch taxonomy genbank eutils written 9 months ago by auninsaw • 10
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Where to find archived NCBI taxonomy file
genome assembly metagenomic taxonomy written 10 months ago by jesselee516 • 70
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