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5
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How to visualize the co-occupancy of one set of genomic data with another.
tfbs methylation co-occupancy histone written 6.2 years ago by Saad Khan • 400 • updated 7 months ago by Biostar ♦♦ 20
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194
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MEME's motifs have an E-vaue too high
meme motif discovery promoter region tfbs written 7 months ago by lspinedaf • 0
2
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1
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241
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1
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How to decrease the number of candidate TFs binding to gene promoter region
regulation promoter tfbs tf written 12 months ago by Shicheng Guo • 8.5k
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1
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How to read AlignACE result?
alignace discovery motif tfbs dna written 5.5 years ago by allyson1115ar • 20 • updated 13 months ago by chernouhov sergey • 50
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2
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How to identify Transcript Factors (TF) binding to my target sequence
tfbs written 15 months ago by Shicheng Guo • 8.5k
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2
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Transcription factor binding site enrichment problem
transcription factor tfbs bioconductor R written 6.1 years ago by nicolas.julien.jung • 10 • updated 15 months ago by avi.maayan • 10
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2
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528
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2
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from coordinate to motif
tfbs motif written 2.4 years ago by Shuang He • 0 • updated 19 months ago by Alex Reynolds ♦ 31k
5
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2.3k
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1
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Find Transcription factor binding site for a gene list
R tfbs promoter written 2.3 years ago by salvatore.raieli2 • 90 • updated 2.2 years ago by Praneet Chaturvedi • 110
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1.5k
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2
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 5.2 years ago by Chris Gene • 70 • updated 2.3 years ago by mt1022 • 230
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558
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TF binding site in the Mitochondrial DNA
tfbs tf written 2.5 years ago by salvatore.raieli2 • 90 • updated 2.5 years ago by Biostar ♦♦ 20
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702
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0
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Using Transfac Match to predict TF-gene binding relations
tfbs match transfac tf-target written 3.1 years ago by liaimin815 • 0
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825
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TransFac Match usage and TFBS annotation
tfbs match transfac written 3.1 years ago by Aimin Li • 30
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By using JASPAR API and PWMScan which tool is more accuracy to predict transcription factor binding sites
genome tfbs jaspar sequence pwm written 6.5 years ago by michaelchen33 • 20 • updated 3.2 years ago by asntech • 50
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5 follow
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How can I see the distribution of TFBS on specific enhancer in UCSC
gene tfbs ucsc written 3.2 years ago by z17645797947 • 0 • updated 3.2 years ago by simon.vanheeringen • 200
4
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902
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1
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SNP annotation with TFBS and histone marks
annotation tfbs histonemarks vep snp written 3.3 years ago by LNA • 30 • updated 3.3 years ago by Emily_Ensembl ♦ 21k
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1.5k
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TF binding region in chromatin contacts
gene tfbs next-gen chip-seq sequencing written 3.5 years ago by ankitplusplus • 30
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1
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Extract common TFBS from a list of genes
gene R tfbs transcription factors affymetrix written 3.9 years ago by sofia.figueiredo • 0 • updated 3.9 years ago by WouterDeCoster ♦ 45k
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Problems to find over-represented TFBS with TOUCAN software
transcription factor binding sites tfbs dna written 3.9 years ago by CiAlves • 0 • updated 3.9 years ago by GenoMax ♦ 94k
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Corresponding TF for Ensembl stable regulatory feature id
ensembl tfbs chip-seq written 4.3 years ago by mariameldova • 0
0
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Can I use AME - Analysis of Motif Enrichment - for RNA-Seq data?
ame motif enrichment tfbs rna-seq written 5.2 years ago by Chris Gene • 70 • updated 4.3 years ago by ivivek_ngs • 5.0k
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782
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MotifFeatures vs AnnotatedFeatures
ensembl regulatory build tfbs written 4.3 years ago by mariameldova • 0 • updated 4.3 years ago by Biostar ♦♦ 20
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reference genome for TFBS
ensembl tfbs hg19 written 4.3 years ago by mariameldova • 0
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2
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Annotate noncoding regions for 1000 genome data
enhancer tfbs snp written 4.5 years ago by qwzhang0601 • 70 • updated 4.5 years ago by Denise CS • 5.1k
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1
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TFBS from UCSC vs. other databases
tfbs transfac ucsc written 4.5 years ago by hannafrida.klein • 40 • updated 4.5 years ago by Emily_Ensembl ♦ 21k
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1
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Differnces between PWM derived from SELEX and ChIP-seq
tfbs position weight matrix chip-seq selex written 6.6 years ago by michaelchen33 • 20 • updated 4.6 years ago by Biostar ♦♦ 20
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Aligning TF binding site to target gene method
tfbs prediction written 4.6 years ago by bharata1803 • 490
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Determining Fold Enrichment of TFBS Over Control Sequences
tfbs transcription factors pwms motif searching written 4.8 years ago by ramblingsjones • 0 • updated 4.7 years ago by Biostar ♦♦ 20
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Job: PhD position to work on Gene Expression Regulation, Centre for Molecular Medicine Norway
tfbs gene expression jobs tf cancer written 5.0 years ago by Anthony Mathelier • 890 • updated 4.8 years ago by Istvan Albert ♦♦ 86k
2
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1.6k
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1
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identifying which SNPs sit in TFBS (Yeast)
bioinformatics tfbs binding site written 5.1 years ago by grins38 • 10 • updated 5.1 years ago by Alex Reynolds ♦ 31k
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Where are the actual transcription factor binding sites located in the CHIP-seq peaks
macs chip-seq peaks tfbs peak calls written 5.2 years ago by Saad Khan • 400 • updated 5.2 years ago by jotan • 1.2k
<prev • 48 results • page 1 of 2 • next >
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