Latest
News
Jobs
Tutorials
Forum
Tags
About
FAQ
Community
Planet
New Post
Log In
New Post
Latest
News
Jobs
Tutorials
Forum
Tags
Planet
Users
Log In
Sign Up
About
Limit : all time
all time
today
this week
this month
this year
0 results • Page
1 of 1
Sort: Rank
Rank
Views
Votes
Replies
Topic does not exist.
No posts found.
0 results • Page
1 of 1
Recent Votes
Answer: Is Biopython a Package or Library?
Answer: Is Biopython a Package or Library?
A: Storing a gene expression matrix in a matrix.mtx
Comment: Clustering of short peptide sequences
Answer: Is anticancer action of HDAC inhibitors - cancer cells specific or it may cause
Comment: Looking for a Whole Genome Sequencing GrCH38 Control group of roughly 250 sample
Comment: Looking for a Whole Genome Sequencing GrCH38 Control group of roughly 250 sample
Recent Locations •
All
United States,
just now
Skövde,
1 minute ago
VIB, Ghent, Belgium,
2 minutes ago
United States,
2 minutes ago
Oxford,
3 minutes ago
United States,
4 minutes ago
Belgium,
4 minutes ago
Recent Awards •
All
Popular Question
to
bsmith030465
▴ 190
Teacher
to
Michael Dondrup
48k
Scholar
to
Jean-Karim Heriche
24k
Scholar
to
jared.andrews07
9.3k
Scholar
to
Bastien Hervé
4.9k
Scholar
to
Joe
19k
Popular Question
to
I0110
▴ 120
Recent Replies
Comment: Split fasta based on symbol and numeric position in header
by
GenoMax
100k
You may be able to do $ cut -d "+" -f1 your_file.fa >NZ_LR732827.1_2243__GH81(350-867) WGDWNVSWRMPQDGPGGQYMDVTSVQGSPY
Comment: Is Biopython a Package or Library?
by
Ram
32k
If we were to rename the py file to `Seq2.py`, would the import statement change to `from Bio.Seq2 import Seq`?
Comment: Split fasta based on symbol and numeric position in header
by
heskett
• 0
I don't know if this will be helpful, but in my years of experience with human genomics, I've only seen FASTA files as storage of raw seque…
Comment: Synonymous and asynonymous sites in Ka/Ks
by
Istvan Albert
87k
to be honest your question is a bit confusing, first you say > not very much interested on how they are calculated but then you seem to w…
Comment: Can too high of a ChIPQC RiP% be indicative of insufficient stringency in peak c
by
jared.andrews07
9.3k
As you said, it's going to vary, but I'd say the average H3K27ac peak is probably 1-5kb in size. If you're getting lots of peaks that are 1…
Comment: Clustering of short peptide sequences
by
xiaoyuzhangh
• 0
Thanks a lot! I can't run the Clustal Omega. [nbp-25-183-57:~] xiaoyuzhang% /Users/xiaoyuzhang/Hammock_v_1.2.0/clustal-omega-1.2.0/clusta…
Answer: Is Biopython a Package or Library?
by
Istvan Albert
87k
"Library" is a generic term that describes a type of software that you make use of within your programs rather than running the software al…
Comment: Can too high of a ChIPQC RiP% be indicative of insufficient stringency in peak c
by
gkunz
▴ 10
Hi Jared, Thank you for the thoughtful response! This is the second time you have provided a clear and helpful answer to a question i …
Answer: Genes with identical reads mapping values across all samples - Kallisto
by
Michael Dondrup
48k
If the transcripts are of fully identical sequence there is no informmation that could help to distinguish them for Kallisto, so in a sense…
Comment: How to get output of annotated genes from ChIPseeker tool
by
Sam
▴ 160
Your question is unclear, but take a look at ```addFlankGeneInfo``` parameter
Answer: Can too high of a ChIPQC RiP% be indicative of insufficient stringency in peak c
by
jared.andrews07
9.3k
This is going to depend very much on the protein being immunoprecipitated. These ranges are not outside the norm for histone marks - I've s…
Comment: protein-protein interaction analysis
by
au.rinki.bio
▴ 10
Thank You so much. Nicely explained
Comment: R libraries to match SNPs by positions (including switching and flipping)
by
Ram
32k
I'm not sure if this is a common requirement - packages/functions may not exist but it might be straightforward to write a function yoursel…
Comment: R and GEO
by
ATpoint
48k
That is a microarray, you cannot load this into the IGV. IGV tracks assume some kind of count data.
Comment: R and GEO
by
geyucoco
• 0
the dataset is GSE126563
Traffic: 2361 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6