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SNP in Transcription factor binding site analysis
transcription factor binding site tfbs snp written 5.3 years ago by Floris Brenk900 • updated 5.3 years ago by Ming Tang2.5k
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How to obtain predicted or lab-verified TFBS in UCSC Genome Browser?
gene tfbs ucsc written 4.7 years ago by allyson1115ar20 • updated 4.7 years ago by Maximilian Haeussler1.3k
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Can I use AME - Analysis of Motif Enrichment - for RNA-Seq data?
ame motif enrichment tfbs rna-seq written 4.3 years ago by Chris Gene60 • updated 3.4 years ago by ivivek_ngs4.9k
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Identification of functionally relevant regions from ChIP-seq experiments
tfbs chip-seq rna-seq written 5.7 years ago by Dataminer2.7k • updated 5.7 years ago by Ming Tang2.5k
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gene set enrichment / GO
tfbs gene ontology gsea written 5.8 years ago by Zhenyu Zhang260 • updated 5.8 years ago by mikhail.shugay3.4k
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Differnces between PWM derived from SELEX and ChIP-seq
tfbs position weight matrix chip-seq selex written 5.7 years ago by michaelchen3320 • updated 3.7 years ago by Biostar ♦♦ 20
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Database for C. elegans TFBS
tfbs c.elegans chip-seq database written 4.4 years ago by pengchy410 • updated 4.4 years ago by jurgnjn70
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More than PWMs for finding TFBS
mus musculus tfbs pwm transcription factors written 5.6 years ago by ilyco50 • updated 5.6 years ago by Coby Viner40
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Find Transcription factor binding site for a gene list
R tfbs promoter written 17 months ago by salvatore.raieli260 • updated 16 months ago by Praneet Chaturvedi120
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Quick way to find all the TFBS peak data for mouse and Human in GEO
peak geo tfbs ucsc written 5.3 years ago by Saad Khan390 • updated 5.2 years ago by Biostar ♦♦ 20
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TFBS from UCSC vs. other databases
tfbs transfac ucsc written 3.6 years ago by hannafrida.klein30 • updated 3.6 years ago by Emily_Ensembl20k
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identifying which SNPs sit in TFBS (Yeast)
bioinformatics tfbs binding site written 4.2 years ago by grins3810 • updated 4.2 years ago by Alex Reynolds29k
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Over representation of TFBS
bioinformatics tfbs sequence transcription written 4.9 years ago by bionovice0 • updated 4.8 years ago by Alex Reynolds29k
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 4.3 years ago by Chris Gene60 • updated 16 months ago by mt1022210
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Problem with JASPAR matrices and clover
tfbs clover jaspar written 5.6 years ago by surka0 • updated 5.5 years ago by Biostar ♦♦ 20
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Known transcription factor binding sites and enhancer locations in Pigs
enhancer tfbs written 4.8 years ago by Saad Khan390 • updated 4.8 years ago by mark.ziemann1.2k
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