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Time series data alignment

time-series data written 9 days ago by ssah9 • 10

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Algorithm for clustering and visualization of non-normalized time-series data

R time-series data clustering written 3.0 years ago by sevenless • 20 • updated 3.0 years ago by Jean-Karim Heriche ♦ 24k

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Recent Replies

C: How to get gene level of differential expression from 2 color channel array with by Gordon Smyth • 2.1k
You have detected dye bias. Dye effect = dye bias. What you see is what is to be expected. Agilen...
C: Get top-contribution variant name for PCA result by luongthang1908 • 50
Thank you so much for your help. I will try the fviz_pca_biplot function to see how I can do the ...
C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju by bkleiboeker • 10
That's great to hear, thank you!
C: How to process metatranscriptomics data by _r_am ♦ 32k
What have you tried? What do you plan to achieve with this analysis? That will outline your appro...
C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju by ATpoint ♦ 44k
This filter has defaults that apply if you do not set a value. The only important thing is that y...
C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju by bkleiboeker • 10
I have also experimented with the `filterByExpr()` function but was unaware that it automated thi...
C: NGS RNA-Seq Analysis Pipeline Tophat vs STAR by _r_am ♦ 32k
I saw something today that reminded me of your code: The NASA RNAseq pipeline scripts are entangl...
C: Am I unnecessarily 'missing' a high number of true-positive DE genes? Or do I ju by ATpoint ♦ 44k
Make your life easy and use the `edgeR` filtering function `filterByExpr` which automates this pr...
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I'd updated seurat from 3.0.2 to the cran version (3.2.2) when I started having this issue. Unins...
A: Setup PHG with Singularity by zrm22 • 0
Hello, The main reason that it looks a lot different is that MakeDefaultDirectoryPipelinePlugin ...
C: What hypothesis test does R use by default for Pearson's correlation coefficient by SpacemanSpiffo • 30
Thank you. Based on this, is it correct to say that a Student's t-test is being peformed?
C: Pac bio assembler by GenoMax ♦ 95k
No idea if this is any better but from PacBio itself: https://github.com/PacificBiosciences/pb-as...

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