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<prev • 27 results • page 1 of 1 • next >
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Many redundant lines in a genes2GO mapping file, is it normal and will it influence my topGo enrichment ?
topgo rna-seq written 9 weeks ago by david.roux • 10 • updated 18 days ago by Biostar ♦♦ 20
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TopGO Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
R topgo rna-seq written 10 weeks ago by jomagrax • 0
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GO analysis using topGO
gene R goenrichment topgo go written 12 weeks ago by mannoulag1 • 60 • updated 12 weeks ago by Kevin Blighe ♦ 37k
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How to combine all three Ontology classes (BP, MF and CC) in a single analysis ?
topgo go written 3 months ago by User1029725 • 100
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TOPGO- how to do GO enrichment using a custom go database?
R gene ontology topgo go enrichment rna-seq written 3 months ago by ahmad.iut • 70 • updated 3 months ago by ahmad mousavi • 380
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issues regarding topGO usage
topgo written 7 months ago by prakashpandey1111 • 0 • updated 7 months ago by Kevin Blighe ♦ 37k
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topGO error with uniprot ID's
R topgo topgouniprot written 10 months ago by MH • 0 • updated 8 months ago by Biostar ♦♦ 20
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GOTerm enrichment rna-seq data
log fold change topgo rna-seq goterm lfc written 10 months ago by studyfranco • 0 • updated 10 months ago by h.mon ♦ 23k
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topGO is performing enrichment test on GO terms that are not present in my dataset
R bioconductor gene ontology topgo written 13 months ago by Fabio Marroni • 2.1k • updated 12 months ago by Pablo Markaide • 20
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Problem with topGO: GO term enrichment analysis
R bioconductor topgo go error written 18 months ago by cristian • 180 • updated 13 months ago by adnbps • 0
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topGo Error in .local(.Object, ...) : allGenes must be a factor with 2 levels
R topgo rna-seq edger written 17 months ago by Ric • 190
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topGO allGenes argument
R topgo rna-seq edger written 17 months ago by Ric • 190 • updated 17 months ago by e.rempel • 720
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data set geneList not found, problem in the topGO tutorial
functional genomics bioconductor topgo go all written 18 months ago by cristian • 180
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topGO: GO terms but no P-value score
R gene ontology topgo written 18 months ago by khhgng • 60
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Retrieving Annotation data from runTest() created object
deseq2 topgo gene ontology rna-seq written 19 months ago by Sreeraj Thamban • 120
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How to rank genes prepared for GSEA analysis with TopGO
topgo gsea rna-seq written 20 months ago by wangdp123 • 140 • updated 20 months ago by YaGalbi • 1.4k
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Help! Gene Ontology Enrichment Analysis
goexpress R topgo microarray ontology written 21 months ago by ab123 • 40 • updated 21 months ago by Mehmet • 460
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Retrieving the gene list related to all GO ID
R gene ontology topgo rna-seq written 21 months ago by Sreeraj Thamban • 120 • updated 21 months ago by e.rempel • 720
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Using Plant GO Slim in topGO
plant go slim gene ontology topgo arabidopsis written 21 months ago by Sreeraj Thamban • 120
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GO analysis using topGO Arabidopsis
geneontology goenrichment topgo rna-seq written 21 months ago by Sreeraj Thamban • 120 • updated 21 months ago by e.rempel • 720
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Errors when extracting significant genes per GO.id from topgo data
R bioconductor topgo rna-seq written 24 months ago by tiago211287 • 1.1k
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Can't find GO annotation with topGO
R bioconductor topgo go gene-ontology written 2.2 years ago by bvernot • 0
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topgo rnaseq error
topgo rna-seq written 2.5 years ago by tarek.mohamed • 240 • updated 2.5 years ago by genomax ♦ 62k
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topgo for rnaseq ERROR
topgo rna-seq written 2.5 years ago by tarek.mohamed • 240 • updated 2.5 years ago by Devon Ryan ♦ 88k
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Open-source tools for GO enrichment in non-model organisms
enrichment topgo go R written 2.8 years ago by biotech • 510
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topGO use showSigOfNodes for non-topGO data? or: how to visualize GO graph from GOseq
R bioconductor topgo goseq rna-seq written 3.9 years ago by tospo • 40 • updated 3.7 years ago by pengchy • 410
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TopGO: Select significant terms under a parent GO term
R gene ontology topgo go written 4.8 years ago by QVINTVS_FABIVS_MAXIMVS • 2.2k • updated 4.0 years ago by Biostar ♦♦ 20
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