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3
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7 follow
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3
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[Errno 8] Exec Format Error Using Tophat 1.3.1
tophat written 9.0 years ago by Marina Manrique1.3k • updated 12 weeks ago by Biostar ♦♦ 20
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122
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1.4k
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Prioritizing Fusion Based On Tophat Result
reads fusion tophat written 6.9 years ago by Angel210 • updated 8 months ago by Biostar ♦♦ 20
1
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297
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0
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How splice-aware aligner (RNA-Seq) deal with long gap (intron) penalty
hisat tophat alignment star rna-seq written 9 months ago by CY480 • updated 8 months ago by Biostar ♦♦ 20
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2
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306
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5 follow
2
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0
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2.9k
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0
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Tophat Error: It Tries To Execute Lines In Fastq Files
tophat bowtie error written 6.9 years ago by newDNASeqer680 • updated 9 months ago by Biostar ♦♦ 20
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517
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4
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2
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9.4k
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2
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Error: Could not find Bowtie 2 index files (GRCh38.*.bt2l)
bowtie2 tophat tophat2 bowtie rna-seq written 3.7 years ago by ashMC10 • updated 10 months ago by Arnaud Ceol850
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1
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2.1k
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1
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Automatically feeding a good mate inner distance to TopHat2
tophat pe rna-seq written 4.4 years ago by umn_bist370 • updated 11 months ago by Biostar ♦♦ 20
2
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1
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1.9k
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1
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Tophat prep_read error
illumina tophat rna-seq written 4.5 years ago by Yuka Takemon40 • updated 11 months ago by RamRS27k
2
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1
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1.9k
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1
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How to run tophat without gff file for bacterial genome
tophat gene expresssion rna-seq bacterial written 5.5 years ago by bassanio20 • updated 12 months ago by Biostar ♦♦ 20
9
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2
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5.2k
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2
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Tophat - Expectancy Of Properly Paired Reads?
tophat rna-seq written 7.8 years ago by Johan870 • updated 12 months ago by Biostar ♦♦ 20
10
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3
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13k
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6 follow
3
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How do I run Tophat?
tophat bowtie written 5.2 years ago by from the mountains90 • updated 12 months ago by h.mon30k
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281
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0
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9
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442
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6 follow
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1
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285
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0
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2
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3
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8.4k
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8 follow
3
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Tophat Rna-Seq Mapping Quality
tophat mapping rna-seq quality written 7.2 years ago by siyu130 • updated 14 months ago by Biostar ♦♦ 20
11
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1
answer
551
views
7 follow
1
answer
TopHat mapping error
tophat bowtie rna-seq written 15 months ago by gokberk60 • updated 15 months ago by genomax85k
0
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2
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485
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5 follow
2
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Directional Strand related settings for RNA-seq Analysis Software
htseq tophat rna-seq smartseq hisat2 written 15 months ago by BM60 • updated 15 months ago by Juke344.4k
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2
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2.9k
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2
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Tophat Error - What Does This Mean?
tophat error bowtie written 6.9 years ago by newDNASeqer680 • updated 15 months ago by Biostar ♦♦ 20
19
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6
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1.2k
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7 follow
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Tophat vs Bowtie alignment rates
bowtie2 tophat alignment written 16 months ago by am370
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619
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1
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2
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1
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1.3k
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can i use tophat for ribo-seq data sets
ribo-seq tophat alignment written 4.8 years ago by A3.8k • updated 17 months ago by Biostar ♦♦ 20
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876
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2
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3
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1
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3.0k
views
5 follow
1
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What causes tophat_reports error?
tophat rna-seq written 6.1 years ago by Bharat Iyengar280 • updated 18 months ago by Biostar ♦♦ 20
1
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1
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432
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1
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1
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0
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580
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0
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4
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1
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608
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1
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Please tell me what's wrong with my tophat script?
bowtie2 tophat bowtie1 written 20 months ago by abdul.suboor1230 • updated 20 months ago by WouterDeCoster44k
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