Showing: tophatreset
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2
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1
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103
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Dealing with multimapping reads in featureCounts
tophat featurecounts rna-seq written 3 days ago by Sreeraj Thamban30 • updated 3 days ago by bruce.moran280
4
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2
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171
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2
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2
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2
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201
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How to generate FPKM value for each replicates?
ngs cufflinks cuffdiff tophat rna-seq written 24 days ago by Phoenix100 • updated 24 days ago by Sparrow_kop90
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3
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3
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Error: segment-based junction search failed with err =-5
bowtie2 tophat rna-seq written 16 months ago by ihabyounis20 • updated 4 weeks ago by Isaac C. Joseph 30
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282
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3
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2
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174
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Tophat Error Message
tophat rna-seq written 6 weeks ago by jammydodger1234560 • updated 6 weeks ago by andrew.j.skelton733.7k
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215
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unmapped reads by Tophat can be aligned by Bowtie2
bowtie2 tophat chip-seq written 8 weeks ago by zhangzhenyusz20 • updated 8 weeks ago by Alex Reynolds20k
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2
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745
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2
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How to change the quality score of reads ? (quick help is appreciated)
tophat bam fastq rna-seq written 17 months ago by mbparsa10 • updated 3 months ago by madhu.912410
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1
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180
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1
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How to set the blast database of TopHat-Fusion
tophat gene fusion database blast written 3 months ago by shiyang9310 • updated 3 months ago by Istvan Albert ♦♦ 73k
15
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1
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347
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6 follow
1
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9
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1.3k
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1
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Searching For Deletion In A Low Number Of Reads
indel mitochondria tophat written 5.0 years ago by Assa Yeroslaviz1.1k • updated 4 months ago by Biostar ♦♦ 20
3
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1
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250
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1
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TopHat installation error
tophat written 4 months ago by salamandra70 • updated 4 months ago by Devon Ryan70k
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1
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1.1k
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1
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download NCBI Blast database for use with tophat
ncbi tophat database blast written 2.5 years ago by lien40 • updated 4 months ago by Biostar ♦♦ 20
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195
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3
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1
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1
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275
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1
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2
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2
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251
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2
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Mapping to a single Chromosome Tophat
tophat galaxy rna-seq written 6 months ago by benjyrolls70 • updated 6 months ago by Devon Ryan70k
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216
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0
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4
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3
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7 follow
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Bowtie & Tophat
tophat cufflinks bowtie written 4.4 years ago by k.nirmalraman890 • updated 6 months ago by mrmkanni930
2
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1
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347
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1
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TopHat Report Transcript Alignment
tophat alignment transcriptome written 6 months ago by athey.johnc40 • updated 6 months ago by Carlo Yague3.2k
2
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1
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327
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1
answer
TopHat vs Bowtie output differences
tophat rna-seq bowtie written 7 months ago by michael.dunne10 • updated 7 months ago by Nicolas Rosewick5.3k
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352
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5 follow
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rna seq bowtie couldn't find index files
tophat rna-seq bowtie written 9 months ago by prasanthgopinathangs20 • updated 7 months ago by Biostar ♦♦ 20
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5 follow
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Running Tophat --Fusion-Search On A Filtered Bam That Was Generated By Tophat
tophat rna-seq written 5.0 years ago by Malachi Griffith15k • updated 7 months ago by Biostar ♦♦ 20
2
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3
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876
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3
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Tophat prep_read error
illumina tophat rna-seq written 21 months ago by Yuka Takemon20 • updated 7 months ago by lprivatjogja10
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329
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3
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683
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0
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1
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1
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445
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1
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How does CIRCexplorer2 work with paired-end data?
tophat circrna rna-seq written 9 months ago by IƱigo Prada350 • updated 8 months ago by kepbod70
2
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2
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469
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2
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tophat aligns to wrong strand
dutp tophat alignment rna-seq strand written 8 months ago by jlmakofske0 • updated 8 months ago by apa@stowers320
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430
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