Showing: tophatreset
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6
votes
2
answers
494
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5 follow
2
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TopHat installation error
tophat written 9 months ago by salamandra80 • updated 5 weeks ago by Bilal20
0
votes
1
answer
251
views
1
answer
RNA SEQ ERCC
ercc tophat rna-seq bowtie written 8 weeks ago by Payal30
3
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1
answer
204
views
1
answer
2
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1
answer
904
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1
answer
TopHat Failed In 'Reporting output tracks' Stage
software error tophat tophat2 rna-seq written 14 months ago by ivan.molodtsov10 • updated 7 weeks ago by zuolin.bai0
5
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2
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2.1k
views
2
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Tophat2 shows error during running
python tophat rna-seq written 2.8 years ago by Whoknows630 • updated 10 weeks ago by Rahul Sharma530
2
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0
answers
235
views
0
answers
1
vote
0
answers
195
views
0
answers
Tophat Reporting output tracks, run out of memory, how to solve?
tophat rna-seq written 12 weeks ago by zoukai34120850 • updated 12 weeks ago by WouterDeCoster26k
0
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0
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189
views
0
answers
4
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5
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3.9k
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5
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Tophat error : Error: gtf_to_fasta returned an error.
tophat next-gen rna-seq written 3.1 years ago by nikhilvgbt0 • updated 3 months ago by Meiyue Wang0
8
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2
answers
361
views
2
answers
Alignment dropped with Salmon
tophat salmon rna-seq written 3 months ago by Sharon160
2
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0
answers
335
views
0
answers
4
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1
answer
217
views
1
answer
How can we validate RNAseq differential gene expressions?
cuffdiff tophat salmon rna-seq edger written 3 months ago by Sharon160 • updated 3 months ago by Devon Ryan76k
6
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2
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315
views
2
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RNA-seq read alignment
tophat hisat2 written 3 months ago by amy1610
6
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0
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345
views
7 follow
0
answers
2
votes
1
answer
220
views
1
answer
tophat equal length problem
tophat equal length fastqc written 4 months ago by HK20 • updated 4 months ago by Nicolas Rosewick6.0k
3
votes
1
answer
604
views
1
answer
Dealing with multimapping reads in featureCounts
tophat featurecounts rna-seq written 5 months ago by Sreeraj Thamban80 • updated 5 months ago by bruce.moran360
4
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2
answers
289
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2
answers
2
votes
2
answers
447
views
2
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How to generate FPKM value for each replicates?
ngs cufflinks cuffdiff tophat rna-seq written 5 months ago by Snijesh VP180 • updated 5 months ago by Sparrow_kop180
6
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3
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1.7k
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3
answers
Error: segment-based junction search failed with err =-5
bowtie2 tophat rna-seq written 21 months ago by ihabyounis20 • updated 6 months ago by Isaac C. Joseph 40
5
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0
answers
483
views
0
answers
3
votes
2
answers
348
views
2
answers
Tophat Error Message
tophat rna-seq written 6 months ago by jammydodger1234560 • updated 6 months ago by andrew.j.skelton734.3k
4
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0
answers
368
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0
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unmapped reads by Tophat can be aligned by Bowtie2
bowtie2 tophat chip-seq written 7 months ago by zhangzhenyusz20 • updated 7 months ago by Alex Reynolds22k
2
votes
2
answers
931
views
2
answers
How to change the quality score of reads ? (quick help is appreciated)
tophat bam fastq rna-seq written 23 months ago by mbparsa10 • updated 8 months ago by madhu.912410
3
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1
answer
333
views
1
answer
How to set the blast database of TopHat-Fusion
tophat gene fusion database blast written 8 months ago by shiyang9340 • updated 8 months ago by Istvan Albert ♦♦ 75k
15
votes
1
answer
605
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6 follow
1
answer
9
votes
1
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1.5k
views
1
answer
Searching For Deletion In A Low Number Of Reads
indel mitochondria tophat written 5.4 years ago by Assa Yeroslaviz1.1k • updated 9 months ago by Biostar ♦♦ 20
0
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1
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1.2k
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1
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download NCBI Blast database for use with tophat
ncbi tophat database blast written 2.9 years ago by lien70 • updated 9 months ago by Biostar ♦♦ 20
3
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0
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314
views
0
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3
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1
answer
889
views
1
answer
1
vote
1
answer
443
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1
answer
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