Showing: tophatreset
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9
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answer
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Searching For Deletion In A Low Number Of Reads
indel mitochondria tophat written 4.7 years ago by Assa Yeroslaviz1.1k • updated 8 days ago by Biostar ♦♦ 10
3
votes
1
answer
107
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1
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TopHat installation error
tophat written 18 days ago by salamandra0 • updated 18 days ago by Devon Ryan65k
0
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1
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952
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1
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download NCBI Blast database for use with tophat
ncbi tophat database blast written 2.2 years ago by lien30 • updated 20 days ago by Biostar ♦♦ 10
3
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0
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114
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0
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2
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1
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435
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1
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1
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1
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161
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1
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2
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2
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135
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2
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Mapping to a single Chromosome Tophat
tophat galaxy rna-seq written 9 weeks ago by benjyrolls40 • updated 9 weeks ago by Devon Ryan65k
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125
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0
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4
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3
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6.9k
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7 follow
3
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Bowtie & Tophat
tophat cufflinks bowtie written 4.1 years ago by k.nirmalraman840 • updated 11 weeks ago by mrmkanni930
2
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1
answer
207
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1
answer
TopHat Report Transcript Alignment
tophat alignment transcriptome written 11 weeks ago by athey.johnc40 • updated 11 weeks ago by Carlo Yague2.9k
2
votes
1
answer
170
views
1
answer
TopHat vs Bowtie output differences
tophat rna-seq bowtie written 3 months ago by michael.dunne10 • updated 3 months ago by Nicolas Rosewick4.8k
6
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0
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272
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5 follow
0
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rna seq bowtie couldn't find index files
tophat rna-seq bowtie written 5 months ago by prasanthgopinathangs20 • updated 3 months ago by Biostar ♦♦ 10
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5 follow
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Running Tophat --Fusion-Search On A Filtered Bam That Was Generated By Tophat
tophat rna-seq written 4.7 years ago by Malachi Griffith15k • updated 3 months ago by Biostar ♦♦ 10
2
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3
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711
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3
answers
Tophat prep_read error
illumina tophat rna-seq written 17 months ago by Yuka Takemon20 • updated 3 months ago by lprivatjogja10
3
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225
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0
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0
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0
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210
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0
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3
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0
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432
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0
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1
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1
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303
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1
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How does CIRCexplorer2 work with paired-end data?
tophat circrna rna-seq written 5 months ago by Iñigo Prada200 • updated 4 months ago by kepbod70
2
votes
2
answers
333
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2
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tophat aligns to wrong strand
dutp tophat alignment rna-seq strand written 4 months ago by jlmakofske0 • updated 4 months ago by apa@stowers320
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277
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0
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1
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0
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219
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0
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Custom genome and tophat
tophat rna-seq sequencing written 5 months ago by Michi870
2
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2
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1.9k
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2
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tophat Preparing reads [FAILED]
tophat written 3.0 years ago by justinfanyi0 • updated 5 months ago by mike0
3
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1
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300
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1
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2
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1
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408
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1
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TopHat Failed In 'Reporting output tracks' Stage
software error tophat tophat2 rna-seq written 5 months ago by ivan.molodtcov10 • updated 5 months ago by mastal5111.6k
0
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283
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0
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Mismatches in cancer RNA-seq
tophat rna-seq cancer written 7 months ago by Iñigo Prada200 • updated 5 months ago by Biostar ♦♦ 10
4
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1
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270
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1
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How to convert .bed file to .juncs file using Tophat?
tophat rna-seq written 5 months ago by heir_of_isildur8810 • updated 5 months ago by Macspider1.1k
10
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2
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435
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2
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tophat --max-multihits impacts 'mapped in a proper pair'
multireads tophat multihits paired-end rna-seq written 6 months ago by Carlo Yague2.9k • updated 6 months ago by John11k
11
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455
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0
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Estimating Mean Inner Distance
tophat tuxedo rna-seq written 6 months ago by CF50
2
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1
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674
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1
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3
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1
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258
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1
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Confusion in Tophat2 input files
tophat alignment rna-seq written 7 months ago by CuriusScientist20 • updated 7 months ago by WouterDeCoster17k
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