Showing: tophatreset
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extract one-side unmapped reads from sam
tophat bam samtools sam written 12 days ago by liorglic40 • updated 12 days ago by Carlo Yague4.0k
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6 follow
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How to check if the mapping results from tophat2 are correct?
tophat mapping rna-seq written 22 months ago by mirza80 • updated 5 weeks ago by Biostar ♦♦ 20
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Tophat running error
tophat rna-seq written 6 weeks ago by mahnazkiani40 • updated 6 weeks ago by genomax49k
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5 follow
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Reducing error bars on TopHat RNA expression analysis
R tophat rna-seq bowtie written 6 months ago by waterspring0 • updated 12 weeks ago by Biostar ♦♦ 20
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Tophat not installing with Biostar Handbook
tophat blast from the past: the tuxedo suite written 12 weeks ago by k.e.pendleton20 • updated 12 weeks ago by h.mon15k
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Tophat Error: Make in Mac OSX
tophat make rna-seq written 3 months ago by vharshavardhanan30 • updated 3 months ago by Ram15k
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5 follow
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TopHat installation error
tophat written 13 months ago by salamandra130 • updated 5 months ago by Bilal20
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RNA SEQ ERCC
ercc tophat rna-seq bowtie written 6 months ago by Payal30
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TopHat Failed In 'Reporting output tracks' Stage
software error tophat tophat2 rna-seq written 18 months ago by ivan.molodtsov10 • updated 5 months ago by zuolin.bai0
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Tophat2 shows error during running
python tophat rna-seq written 3.1 years ago by Whoknows640 • updated 6 months ago by Rahul Sharma540
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Tophat Reporting output tracks, run out of memory, how to solve?
tophat rna-seq written 6 months ago by zoukai34120850 • updated 6 months ago by WouterDeCoster29k
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Tophat error : Error: gtf_to_fasta returned an error.
tophat next-gen rna-seq written 3.4 years ago by nikhilvgbt0 • updated 7 months ago by Meiyue Wang0
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5 follow
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Alignment dropped with Salmon
tophat salmon rna-seq written 7 months ago by Sharon320
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How can we validate RNAseq differential gene expressions?
cuffdiff tophat salmon rna-seq edger written 7 months ago by Sharon320 • updated 7 months ago by Devon Ryan81k
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RNA-seq read alignment
tophat hisat2 written 7 months ago by amy1620
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7 follow
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tophat equal length problem
tophat equal length fastqc written 8 months ago by HK20 • updated 8 months ago by Nicolas Rosewick6.3k
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Dealing with multimapping reads in featureCounts
tophat featurecounts rna-seq written 9 months ago by Sreeraj Thamban90 • updated 9 months ago by bruce.moran410
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How to generate FPKM value for each replicates?
ngs cufflinks cuffdiff tophat rna-seq written 9 months ago by Snijesh VP190 • updated 9 months ago by Sparrow_kop180
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Error: segment-based junction search failed with err =-5
bowtie2 tophat rna-seq written 2.1 years ago by ihabyounis20 • updated 10 months ago by Isaac C. Joseph 40
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Tophat Error Message
tophat rna-seq written 10 months ago by jammydodger12345610 • updated 10 months ago by andrew.j.skelton735.0k
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unmapped reads by Tophat can be aligned by Bowtie2
bowtie2 tophat chip-seq written 11 months ago by zhangzhenyusz20 • updated 11 months ago by Alex Reynolds24k
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