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15
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Can Tophat2 Align a Book?
tophat2 written 5.3 years ago by tiago2112871.2k • updated 3 months ago by Biostar ♦♦ 20
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215
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1
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185
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The Tophta2 ERR, [ERRno 2]
software error genome forum tophat2 tophat2 err written 7 months ago by ynau_kanghuadu0 • updated 7 months ago by Asaf8.4k
4
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2
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Error: Could not find Bowtie 2 index files (GRCh38.*.bt2l)
bowtie2 tophat tophat2 bowtie rna-seq written 3.9 years ago by ashMC10 • updated 13 months ago by Arnaud Ceol850
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5 follow
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Tophat Alignment Score And Parameters
tophat2 written 7.5 years ago by Varun Gupta1.1k • updated 15 months ago by Biostar ♦♦ 20
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5
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543
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2
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what is the mean of 'Error running 'prep_reads' ???
bowtie2 tophat2 written 5.1 years ago by A3.9k • updated 24 months ago by Biostar ♦♦ 20
8
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12k
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The comparison between HISAT2 and Tophat2
tophat2 rna-seq hisat2 written 4.6 years ago by Peng Huang50 • updated 2.1 years ago by RamRS30k
0
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661
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RNA-seq High Variation Between and Within Groups
htseq tophat2 rna-seq written 2.1 years ago by jacobsen.jeremy40 • updated 2.1 years ago by h.mon31k
2
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2
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3.7k
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2
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Weird Tophat2 Error Message
tophat2 written 7.1 years ago by Nick270 • updated 2.2 years ago by archana.bioinfo87180
3
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1.1k
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0
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Tophat2 Error gzip pipe broken? zipped file empty?
tophat2 alignment rna-seq bowtie gzip written 2.2 years ago by biogirl040 • updated 2.2 years ago by h.mon31k
4
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1
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1.4k
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1
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indicizing genome in tophat2
tophat2 written 5.0 years ago by A3.9k • updated 2.4 years ago by Biostar ♦♦ 20
2
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2.1k
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1
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TopHat Failed In 'Reporting output tracks' Stage
software error tophat tophat2 rna-seq written 3.8 years ago by ivan.molodtsov10 • updated 2.7 years ago by zuolin.bai0
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0
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765
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Tophat 2 error
tophat2 written 2.8 years ago by priteshrhsabara0
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1.0k
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0
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7
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1.7k
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7 follow
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Speed up Tophat2 running
dutp tophat2 rna-seq written 2.9 years ago by yuabrahamliu40
1
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926
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rnaseq data vs. phenotype
tophat2 deseq2 rna-seq written 3.2 years ago by firatuyulur300
9
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1
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5 follow
1
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hisat2 parameters tuning to match tophat2 parameters
parameters tophat2 rna-seq hisat2 written 3.3 years ago by pierre.ortalo0 • updated 3.3 years ago by Istvan Albert ♦♦ 85k
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3.6k
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13
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1.8k
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 3.5 years ago by Gary480 • updated 3.5 years ago by genomax90k
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1.3k
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0
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7
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4.7k
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understanding multi-mapped reads
unique tophat2 samtools multi-mapped written 3.7 years ago by Assa Yeroslaviz1.4k • updated 3.7 years ago by Carlo Yague5.0k
2
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2.3k
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1
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Output unmapped reads to a file when using tophat2
tophat2 written 5.6 years ago by biolab1.2k • updated 3.7 years ago by Biostar ♦♦ 20
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28
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3.2k
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13 follow
3
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0
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1.9k
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0
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8
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4.2k
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Tophat2 "error running tophat_reports"
tophat tophat2 rna-seq written 4.5 years ago by Bibi20 • updated 4.1 years ago by cnhuangxy0
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