Showing: tophat2reset
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3
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Error: Could not find Bowtie 2 index files (GRCh38.*.bt2l)
bowtie2 tophat tophat2 bowtie rna-seq written 3.0 years ago by ashMC10 • updated 11 weeks ago by Arnaud Ceol840
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1
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2.5k
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5 follow
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Tophat Alignment Score And Parameters
tophat2 written 6.7 years ago by Varun Gupta1.1k • updated 4 months ago by Biostar ♦♦ 20
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405
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5
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329
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what is the mean of 'Error running 'prep_reads' ???
bowtie2 tophat2 written 4.2 years ago by A3.6k • updated 13 months ago by Biostar ♦♦ 20
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The comparison between HISAT2 and Tophat2
tophat2 rna-seq hisat2 written 3.7 years ago by Peng Huang50 • updated 14 months ago by RamRS24k
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445
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RNA-seq High Variation Between and Within Groups
htseq tophat2 rna-seq written 14 months ago by jacobsen.jeremy40 • updated 14 months ago by h.mon28k
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2
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3.4k
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2
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Weird Tophat2 Error Message
tophat2 written 6.3 years ago by Nick270 • updated 16 months ago by archana.bioinfo87170
3
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0
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735
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0
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Tophat2 Error gzip pipe broken? zipped file empty?
tophat2 alignment rna-seq bowtie gzip written 16 months ago by biogirl040 • updated 16 months ago by h.mon28k
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1
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1.3k
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1
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indicizing genome in tophat2
tophat2 written 4.2 years ago by A3.6k • updated 19 months ago by Biostar ♦♦ 20
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1
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1
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TopHat Failed In 'Reporting output tracks' Stage
software error tophat tophat2 rna-seq written 2.9 years ago by ivan.molodtsov10 • updated 22 months ago by zuolin.bai0
2
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0
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645
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Tophat 2 error
tophat2 written 23 months ago by priteshrhsabara0
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749
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7
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0
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1.3k
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7 follow
0
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Speed up Tophat2 running
dutp tophat2 rna-seq written 24 months ago by yuabrahamliu40
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rnaseq data vs. phenotype
tophat2 deseq2 rna-seq written 2.4 years ago by firatuyulur290
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1
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1.4k
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5 follow
1
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hisat2 parameters tuning to match tophat2 parameters
parameters tophat2 rna-seq hisat2 written 2.4 years ago by pierre.ortalo0 • updated 2.4 years ago by Istvan Albert ♦♦ 81k
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13
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1.3k
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Error of bam-to-sam conversion using samtools
tophat2 samtools sam rna-seq bam written 2.7 years ago by Gary470 • updated 2.7 years ago by genomax74k
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1.1k
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7
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1
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3.4k
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understanding multi-mapped reads
unique tophat2 samtools multi-mapped written 2.8 years ago by Assa Yeroslaviz1.2k • updated 2.8 years ago by Carlo Yague4.7k
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1
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Output unmapped reads to a file when using tophat2
tophat2 written 4.8 years ago by biolab1.1k • updated 2.8 years ago by Biostar ♦♦ 20
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28
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2.5k
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13 follow
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0
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0
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1.6k
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0
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8
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1
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3.7k
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1
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Tophat2 "error running tophat_reports"
tophat tophat2 rna-seq written 3.6 years ago by Bibi20 • updated 3.2 years ago by cnhuangxy0
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Tophat2, Strand-Specific And Genes.Gtf
tophat2 written 6.8 years ago by GPR320 • updated 3.2 years ago by Biostar ♦♦ 20
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1.3k
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0
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2
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3
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4.6k
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7 follow
3
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