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Identification of transcription factor - gene regulation information
transcription factor tcga rna-seq written 8 months ago by Vasu • 420 • updated 27 days ago by Biostar ♦♦ 20
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Profile HMM to find sequence motif using Baum-Welch instead of using a given multiple sequence alignment?
hmm motif hidden markov model transcription factor written 11 weeks ago by guixien • 0
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Genes regulated by transcription factors
transcription factor gene regulation written 11 months ago by pankaj27data • 0 • updated 12 weeks ago by Alex Reynolds ♦ 29k
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Transcription factor binding site enrichment problem
transcription factor tfbs bioconductor R written 5.1 years ago by nicolas.julien.jung • 10 • updated 3 months ago by avi.maayan • 10
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Tool: Transcription Factor Binding Sites, Motifs and Expression Profiles from ~10200 ChIP-seq and ~20000 RNA-seq samples
transcription factor lncrna chip-seq tool mirna written 3.3 years ago by lsp03yjh • 790 • updated 5 months ago by angajalaanusha • 0
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How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 2.6 years ago by mamao • 0 • updated 6 months ago by Biostar ♦♦ 20
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How to find which genes are transcriptional factors from a list of genes?
gene transcription factor written 6 months ago by nkabo • 10 • updated 6 months ago by RamRS ♦ 25k
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ATAC-seq transcription factor binding prediction
transcription factor atac-seq rna-seq written 14 months ago by Lucy • 40 • updated 11 months ago by am2622 • 0
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Confusion of TF-gene interactions database
transcription factor interaction tf tf-gene written 12 months ago by Batu • 170 • updated 12 months ago by biostart • 340
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Clustering of transcriptomic data based on all genes vs. only TFs
transcription factor hierarchical clustering written 12 months ago by kartikeya.singh001 • 0
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Target genes of position-specific transcription factors
transcription factor targetted genes written 14 months ago by zaibunnisa.t • 0
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Tool for transcription factor driven prediction of binding sites
transcription factor promoter binding sites written 14 months ago by edoardo.piombo • 20 • updated 14 months ago by Alex Reynolds ♦ 29k
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Consensus motif of closely related TFs
motif pwm sequence chip-seq transcription factor written 16 months ago by rbronste • 320 • updated 15 months ago by UnivStudent • 380
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Draw gene-transcroption factor network starting from a list of gene
transcription factor written 15 months ago by english.server • 160
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 4.2 years ago by Chris Gene • 60 • updated 15 months ago by mt1022 • 210
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What is op.tf.ass format when I am trying to download a list of transcription factors?
genome transcription factor gene written 17 months ago by Za • 120 • updated 17 months ago by genomax ♦ 76k
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Transcription factor enrichment analysis
fisher exact test enrichment transcription factor written 18 months ago by chipolino • 40
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Modeling Transcription Factor-DNA binding
transcription factor probabilistic models written 18 months ago by justinms • 10
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Filter HT-Seq output for gene subclasses
htseq transcription factor rna-seq written 24 months ago by rbronste • 320
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Job: Postdoc in Computational Biology - Transcription Factors and DNA methylation, University of Oslo, Oslo, Norway
dna methylation transcription factor job cancer written 2.1 years ago by Anthony Mathelier • 880 • updated 2.1 years ago by genomax ♦ 76k
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common transcription factor for a list of gene in Arabidopsis thaliana.
transcription factor arabidopsis thaliana written 2.1 years ago by Omid • 560 • updated 2.1 years ago by Alex Reynolds ♦ 29k
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Extract motif ids of all transcription factors in human
humans transcription factor jaspar written 2.6 years ago by anshupa.vssut • 50 • updated 2.2 years ago by asntech • 50
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Transcription Factor Binding Sites
sequence search transcription factor binding sites written 5.1 years ago by andrew.j.skelton73 ♦ 5.9k • updated 2.2 years ago by robinvanderlee • 10
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Tool: GimmeMotifs 0.11.1: for all your transcription factor motif needs
transcription factor chip-seq tool regulatory motifs written 2.4 years ago by simon.vanheeringen • 170
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Can we predict/quantify transcription factor activation using gene expression data?
transcription factor gene expression tf activation written 3.1 years ago by Diwan • 560 • updated 2.5 years ago by Biostar ♦♦ 20
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Transcription factor gene targets
transcription factor chip-seq written 2.5 years ago by mforde84 • 1.2k • updated 2.5 years ago by Alex Reynolds ♦ 29k
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Database with gene regulatory interactions for C.elegans?
transcription factor database worm elegans written 2.6 years ago by mpyat • 0 • updated 2.6 years ago by harold.smith.tarheel • 4.5k
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Transcription factor in nucleosome free region
transcription factor regulatory nulceosome written 2.7 years ago by ankitplusplus • 30
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Get Transcription factor on GDC
transcription factor written 2.7 years ago by landscape95 • 160
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how to get a list of genes affected by a transcription factor?
transcription factor genes written 2.7 years ago by galkimhi123 • 10 • updated 2.7 years ago by Emily_Ensembl ♦ 20k
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