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Tool: Transcription Factor Binding Sites, Motifs and Profiles from ~10200 ChIP-seq and TCGA Pan-Cancer data
transcription factor lncrna chip-seq tool mirna written 10 months ago by lsp03yjh • 470
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Can we predict/quantify transcription factor activation using gene expression data?
transcription factor gene expression tf activation written 8 months ago by Diwan • 360 • updated 24 days ago by Biostar ♦♦ 20
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6 follow
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How to search for consensus sequence in RNA-seq data?
transcription factor motif rna-seq written 12 weeks ago by mamao • 0 • updated 27 days ago by Alex Reynolds ♦ 20k
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Transcription factor gene targets
transcription factor chip-seq written 4 weeks ago by mforde84 • 790 • updated 4 weeks ago by Alex Reynolds ♦ 20k
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Extract motif ids of all transcription factors in human
humans transcription factor jaspar written 9 weeks ago by anshupa.vssut • 20 • updated 9 weeks ago by WouterDeCoster ♦ 20k
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Database with gene regulatory interactions for C.elegans?
transcription factor database worm elegans written 11 weeks ago by mpyat • 0 • updated 11 weeks ago by harold.smith.tarheel • 3.7k
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Transcription factor in nucleosome free region
transcription factor regulatory nulceosome written 12 weeks ago by ankitplusplus • 10
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Get Transcription factor on GDC
transcription factor written 3 months ago by landscape95 • 70
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how to get a list of genes affected by a transcription factor?
transcription factor genes written 3 months ago by galkimhi123 • 0 • updated 3 months ago by Emily_Ensembl ♦ 12k
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Transcription Factor Prediction in non-modal plant
transcription factor prediction non-modal plant written 7 months ago by bhardwaj1991 • 20
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Transcription Factor, Promoter dataset
dataset promoter transcription factor written 7 months ago by mojtabanikahd • 0
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How to Construct TF-based regulation network using Cytoscape software
transcription factor network cytoscape written 8 months ago by Farbod • 3.0k
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How to report differentially expressed transcription factors in scatter plot
transcription factor rna-seq written 8 months ago by Farbod • 3.0k
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Transcription factor discovery from RNA-seq data; Is it practical ?
transcription factor blast rna-seq written 8 months ago by Farbod • 3.0k • updated 8 months ago by Devon Ryan ♦ 70k
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Does transcription factors interacted more than the overall PPI?
transcription factor ppi written 9 months ago by pengchy • 350
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Find transcription factors that bind to inputted nucleotide sequence?
transcription factor written 10 months ago by randalljellis • 70
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How can i find the regualatory transcription factor of my list of gene
gene transcription factor regulatory genomics written 13 months ago by ankitplusplus • 10 • updated 13 months ago by zwdzwd • 110
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Is there any paper about motif finding based on PWM on genome sequence?
transcription factor pwm sequence written 13 months ago by bharata1803 • 230
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Download transfac public database
transcription factor transfac written 14 months ago by bharata1803 • 230 • updated 14 months ago by UnivStudent • 360
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JASPAR motifs download
transcription factor jaspar sequence written 14 months ago by bharata1803 • 230
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Transcription factor binding site prediction program/algorithm
transcription factor prediction binding site written 14 months ago by bharata1803 • 230 • updated 14 months ago by Ar • 700
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UCSC_TFBS option in DAVID
gene transcription factor david ucsc written 15 months ago by Fereshteh • 2.7k
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Help identifying TATA boxes
transcription factor tatabox promoter written 16 months ago by kajaenilsen • 10 • updated 16 months ago by Michael Dondrup ♦ 42k
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Chip-Seq (Transcription Factor) data resources
transcription factor chip-seq datasets written 16 months ago by Bioinformatist Newbie • 210 • updated 16 months ago by Devon Ryan ♦ 70k
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Experimental method to count the mean number of DNA-bound transcription factors
transcription factor dna written 18 months ago by Pascal • 0 • updated 17 months ago by Biostar ♦♦ 20
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Resources for genome-wide maps of transcription factor binding sites?
transcription factor cistrome binding site written 2.3 years ago by Alexander Skates • 280 • updated 19 months ago by Biostar ♦♦ 20
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Tutorial: Determine if a transcription factor is bound with CENTIPEDE
transcription factor tutorial chip-seq dnase-seq written 2.1 years ago by Kamil • 1.5k • updated 20 months ago by wujiaqi • 0
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strand specificity of TFBS
binding transcription factor tfbs motif forum written 21 months ago by Chris Gene • 60
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Estimate transcription factors binding sites for Drosophila genes
drosophila transcription factor tfbs written 3.2 years ago by EvoGen • 10 • updated 22 months ago by Joseph Pearson • 360
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Find which transcription factors are regulated in a set of genes
transcription factor next-gen rna-seq written 2.1 years ago by manashreed • 20
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