Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: transcriptome • reset
or   Classic search
<prev • 246 results • page 1 of 9 • next >
0
votes
0
answers
75
views
0
answers
How to prepare input data for DiffCoEx
wgcna transcriptome R written 12 days ago by Reza • 0
0
votes
0
answers
80
views
0
answers
What web software can do gap filling, error correction, elongation, consolidation and qual improvment of the transcriptomes?
post-assembly data processing transcriptome written 25 days ago by uk_plant_parasite_genome • 0
0
votes
0
answers
74
views
0
answers
Are there any analogs of the RAST and Prokka software for the plant transcriptome and genome annotation?
annotation transcriptome plant prokka rast written 25 days ago by uk_plant_parasite_genome • 0
1
vote
1
answer
84
views
1
answer
Problem with plot_bootstrap function in sleuth
R sleuth rna-seq transcriptome written 4 weeks ago by lalvarez • 10
4
votes
1
answer
106
views
1
answer
Working backwards - How do I retrieve transcripts from a primer list using sequence and amplicon length?
alignment primer blast transcriptome written 4 weeks ago by dacotahm • 10 • updated 4 weeks ago by h.mon ♦ 21k
2
votes
2
answers
119
views
2
answers
references for fold-change cutoff
cutoff transcriptome fold-change written 7 weeks ago by CrazyB • 200 • updated 7 weeks ago by Fabio Marroni • 2.0k
0
votes
1
answer
127
views
1
answer
Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 8 weeks ago by Vijay Lakhujani ♦ 3.4k • updated 8 weeks ago by Damian Kao ♦ 15k
1
vote
1
answer
97
views
1
answer
Are Clariom D arrays simply renamed HTA-3.0 arrays?
arrays transcriptome written 8 weeks ago by AliStairR • 0 • updated 8 weeks ago by Charles Warden ♦ 5.8k
1
vote
0
answers
200
views
0
answers
What is the fate of low coverage region during Trinity assembly of transcriptome data?
trinity transcriptome assembly written 8 weeks ago by MAPK • 1.3k
0
votes
2
answers
168
views
2
answers
error while Kissplice run
kissplice snp transcriptome written 11 weeks ago by KG • 10
0
votes
0
answers
651
views
0
answers
Average number of contigs per scaffold
assembly next-gen rna-seq alignment transcriptome written 2.8 years ago by Rahul • 30 • updated 11 weeks ago by RamRS ♦ 19k
0
votes
0
answers
201
views
0
answers
Genome annotation using transcriptome data
genome annotation transcriptome written 3 months ago by KG • 10
2
votes
0
answers
552
views
0
answers
de novo transcriptome assembly of Oxford Nanopore Technologies long reads
assembly transcriptome rna-seq denovo ont written 4 months ago by Alicia • 10
5
votes
2
answers
5.1k
views
2
answers
Using rna-seq, why map reads to the genome but calculate gene expression by aligning to the transcriptome?
genome rna-seq transcriptome written 3.5 years ago by jgbradley1 • 90 • updated 4 months ago by Tom K • 0
1
vote
1
answer
187
views
1
answer
Where I can download a reference genome of a pine tree transcriptome?
plant reference conifer transcriptome written 4 months ago by conifer_genomics_uk • 0 • updated 4 months ago by genomax ♦ 59k
4
votes
1
answer
208
views
1
answer
How to approach QTL for transcriptomic data?
qtl snp transcriptome written 4 months ago by niccolo.fran • 0 • updated 4 months ago by EagleEye ♦ 6.0k
0
votes
1
answer
260
views
1
answer
TransDecoder: Filtering *_longest_orfs.pep Results
next-gen transdecoder cdna sequence transcriptome written 5 months ago by mduhon8 • 0 • updated 5 months ago by h.mon ♦ 21k
0
votes
1
answer
200
views
1
answer
sortmerna showing problem of nucleotide length
ion proton s5 rna-seq transcriptome written 5 months ago by ppnana • 0 • updated 5 months ago by Nitin Narwade • 330
0
votes
0
answers
238
views
0
answers
Problems in identifying heterozygous transcripts using de novo transcriptome assembly via Trinity (galaxy)
assembly rna-seq transcriptome written 7 months ago by aih5 • 0 • updated 5 months ago by Biostar ♦♦ 20
0
votes
0
answers
221
views
0
answers
Transcriptomics and gKaKs pipeline
gkaks next-gen rna-seq transcriptome written 7 months ago by mac123 • 0 • updated 5 months ago by Biostar ♦♦ 20
2
votes
0
answers
196
views
0
answers
What is "Possible polymerase run-on fragment"?
transcriptome written 6 months ago by I0110 • 120
0
votes
0
answers
759
views
0
answers
using gmap to find tss and tes in genome file.
gmap genome alignment transcriptome written 22 months ago by a.rex • 170 • updated 6 months ago by Biostar ♦♦ 20
2
votes
0
answers
296
views
0
answers
CDS prediction for newly assembled transcripts
assembly transcriptome rna-seq cds written 6 months ago by I0110 • 120
20
votes
5
answers
5.5k
views
11 follow
5
answers
Human Gene Regulatory Database
database transcriptome written 5.8 years ago by pavishivakumar • 90 • updated 7 months ago by c.chakraborty • 110
4
votes
1
answer
301
views
1
answer
Generate transcriptome fasta for RNA-seq analysis with Salmon
rna-seq transcriptome written 7 months ago by guillaume.rbt • 460
2
votes
0
answers
311
views
0
answers
Given a list of RefSeq homo sapiens mRNA transcripts, what is the simplest way to get the corresponding sequences from some other related species?
alignment orthology transcriptome written 8 months ago by Joel Wallenius • 10
0
votes
0
answers
164
views
0
answers
A question about modular pipeline for transcriptome
pipeline transcriptome written 8 months ago by leboralli • 0
0
votes
1
answer
315
views
1
answer
Blast2GO tolerant susceptible stress
plant stress blast2go rna-seq transcriptome written 9 months ago by susana.ramirez.par • 0 • updated 9 months ago by sgoetz123 • 10
1
vote
1
answer
330
views
5 follow
1
answer
Strategy for genome annotation for a new individual of a well-established species
assembly annotation transcriptome written 9 months ago by liorglic • 40 • updated 9 months ago by Rohit • 1.3k
2
votes
5
answers
759
views
5 follow
5
answers
How to improve existing transcriptome annotation using cufflink protocol ?
assembly cufflink cuffmerge transcriptome written 18 months ago by Chirag Parsania • 1.2k • updated 9 months ago by colindaven • 840
<prev • 246 results • page 1 of 9 • next >
Recent Votes
Recent Locations • All »
  • Charlottesville, VA, 1 minute ago
  • Belgium, 2 minutes ago
  • United States, 4 minutes ago
  • New York, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1534 users visited in the last hour