Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: transcriptome • reset
or   Classic search
<prev • 259 results • page 1 of 9 • next >
0
votes
0
answers
111
views
0
answers
IGV interpretation of assembled and annotated transcriptome reads in an allotetraploid
duplicate allotetraploid igv rna-seq transcriptome written 16 days ago by ksgouros • 0 • updated 10 days ago by Biostar ♦♦ 20
0
votes
1
answer
166
views
1
answer
Genome Guided Transcriptome assembly
genome assembly rna-seq transcriptome written 5 weeks ago by msobol • 10 • updated 5 weeks ago by Buffo • 1.5k
12
votes
3
answers
2.1k
views
7 follow
3
answers
An approximate number of human genes, transcripts, proteins and metabolites?
genome proteome metabolome transcriptome written 2.1 years ago by ahmadbiotech • 30 • updated 5 weeks ago by zx8754 ♦ 7.1k
2
votes
1
answer
141
views
1
answer
How to run Trinotate
assembly trinotate rna-seq transcriptome written 7 weeks ago by luzglongoria • 20
10
votes
1
answer
4.5k
views
6 follow
1
answer
Advice : Building Transcript Models Using Cufflinks
cufflinks rna-seq transcriptome written 6.9 years ago by Abhi • 1.5k • updated 7 weeks ago by Biostar ♦♦ 20
1
vote
0
answers
160
views
5 follow
0
answers
Basic question about SWISSPROT
swissprot rna-seq transcriptome written 9 weeks ago by luzglongoria • 20
0
votes
0
answers
201
views
0
answers
Are there any analogs of the RAST and Prokka software for the plant transcriptome and genome annotation?
annotation transcriptome plant prokka rast written 5 months ago by uk_plant_parasite_genome • 0 • updated 12 weeks ago by Biostar ♦♦ 20
2
votes
3
answers
247
views
3
answers
How calculate CG content for each contig in an transcript assembly?
cg content assembly contig rna-seq transcriptome written 3 months ago by luzglongoria • 20 • updated 3 months ago by Vijay Lakhujani ♦ 4.0k
0
votes
0
answers
195
views
0
answers
Trimming sequences based on NCBI contamination screen report
ncbi assembly transcriptome written 3 months ago by T_18 • 30
1
vote
0
answers
235
views
0
answers
Assembling ESTs and illumina reads
ests illumina de-novo transcriptome written 3 months ago by Joseph Hughes • 2.7k
3
votes
1
answer
255
views
1
answer
Comparing Multiple Species RNA seq data
transcriptome evolution rna-seq comparative written 3 months ago by Lmira zand • 0 • updated 3 months ago by johnsonnathant • 80
0
votes
1
answer
218
views
1
answer
Meta_analysis of different platforms of microarray data
meta analysis microarray R transcriptome written 3 months ago by j_jamal96 • 0 • updated 3 months ago by Kevin Blighe ♦ 41k
0
votes
0
answers
199
views
0
answers
Mapping with GMAP: which output option shall I use?
genome assembly transcriptome written 3 months ago by luzglongoria • 20
2
votes
1
answer
201
views
1
answer
Transcript assembly with nanopore long reads
assembly long reads transcriptome written 3 months ago by caggtaagtat • 500 • updated 3 months ago by colindaven • 1.2k
0
votes
0
answers
166
views
0
answers
Pre-filtering transcriptome data by gene type
rna-seq non-coding rna transcriptome written 3 months ago by rrbutleriii • 50
0
votes
1
answer
307
views
1
answer
How to map RNA-seq with hisat2, stringtie, an assembly fasta, a gtf file, and a transcript fasta?
stringtie hisat2 mapping transcriptome written 3 months ago by O.rka • 90 • updated 3 months ago by swbarnes2 ♦ 5.2k
0
votes
0
answers
189
views
0
answers
How to prepare input data for DiffCoEx
wgcna transcriptome R written 4 months ago by Reza • 0
0
votes
0
answers
140
views
0
answers
What web software can do gap filling, error correction, elongation, consolidation and qual improvment of the transcriptomes?
post-assembly data processing transcriptome written 5 months ago by uk_plant_parasite_genome • 0
1
vote
1
answer
191
views
1
answer
Problem with plot_bootstrap function in sleuth
R sleuth rna-seq transcriptome written 5 months ago by lalvarez • 10
4
votes
1
answer
213
views
1
answer
Working backwards - How do I retrieve transcripts from a primer list using sequence and amplicon length?
alignment primer blast transcriptome written 5 months ago by dacotahm • 10 • updated 5 months ago by h.mon ♦ 24k
2
votes
2
answers
181
views
2
answers
references for fold-change cutoff
cutoff transcriptome fold-change written 5 months ago by CrazyB • 210 • updated 5 months ago by Fabio Marroni • 2.1k
0
votes
1
answer
280
views
1
answer
Where to find a valid GTF file for stringtie asssembly?
gtf stringtie transcriptome written 6 months ago by Vijay Lakhujani ♦ 4.0k • updated 6 months ago by Damian Kao ♦ 15k
1
vote
1
answer
201
views
1
answer
Are Clariom D arrays simply renamed HTA-3.0 arrays?
arrays transcriptome written 6 months ago by AliStairR • 0 • updated 6 months ago by Charles Warden ♦ 6.5k
1
vote
0
answers
293
views
0
answers
What is the fate of low coverage region during Trinity assembly of transcriptome data?
trinity transcriptome assembly written 6 months ago by MAPK • 1.4k
0
votes
2
answers
267
views
2
answers
error while Kissplice run
kissplice snp transcriptome written 6 months ago by KG • 10
0
votes
0
answers
711
views
0
answers
Average number of contigs per scaffold
assembly next-gen rna-seq alignment transcriptome written 3.2 years ago by Rahul • 30 • updated 6 months ago by RamRS ♦ 21k
0
votes
0
answers
385
views
0
answers
Genome annotation using transcriptome data
genome annotation transcriptome written 7 months ago by KG • 10
2
votes
0
answers
926
views
0
answers
de novo transcriptome assembly of Oxford Nanopore Technologies long reads
assembly transcriptome rna-seq denovo ont written 8 months ago by Alicia • 10
5
votes
2
answers
5.3k
views
2
answers
Using rna-seq, why map reads to the genome but calculate gene expression by aligning to the transcriptome?
genome rna-seq transcriptome written 3.8 years ago by jgbradley1 • 100 • updated 8 months ago by Tom K • 0
1
vote
1
answer
292
views
1
answer
Where I can download a reference genome of a pine tree transcriptome?
plant reference conifer transcriptome written 8 months ago by conifer_genomics_uk • 0 • updated 8 months ago by genomax ♦ 65k
<prev • 259 results • page 1 of 9 • next >
Recent Votes
Recent Locations • All »
  • United States, 1 minute ago
  • Poland, 3 minutes ago
  • United Kingdom, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1405 users visited in the last hour