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1
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90
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Extract species tree from the Ensembl Compara database
ensembl database tree written 25 days ago by BlastedBadger • 60 • updated 25 days ago by Emily_Ensembl ♦ 17k
0
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0
answers
82
views
0
answers
How to build a phylogenetic tree (breast cancer samples)
phylogenetic phylogenetics tree written 25 days ago by Pin.Bioinf • 230
0
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0
answers
164
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0
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Generate all possible bifurkating newick trees for N taxa
generate tree newick written 10 weeks ago by al-ash • 100
2
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2
answers
145
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2
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plot and show support values in consensus tree from n nj euclidean distance matrix replicates
nj phylo tree euclidean ape written 5 weeks ago by jlsovaz • 0
0
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0
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106
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0
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Phylogenic tree - genetic distance bigger than 1
sequence phylogenic alignment tree written 6 weeks ago by jduc • 0
0
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0
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125
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0
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Combine node/branch labels from multiple trees into one
annotation label tree treegraph2 written 10 weeks ago by al-ash • 100
3
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0
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156
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What is the standard way of preparing homolog sequences for a phylogenetic analysis?
phylogenetic homolog tree written 3 months ago by johnnytam100 • 100
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0
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162
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0
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Where to save metadata about trees in a nexus file?
nexus tree written 3 months ago by hyanwong • 60
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0
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183
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0
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Displaying a controversial phylogenetic tree as a network to explicitate noise-generating branches
genome network tree phylogenesis convert written 6 months ago by Macspider • 2.8k • updated 3 months ago by Biostar ♦♦ 20
14
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5
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5.3k
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6 follow
5
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Verifying Phylogeny Trees
phylogenetics tree written 8.2 years ago by Jamand • 110 • updated 4 months ago by Biostar ♦♦ 20
0
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1
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121
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1
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REALPHY and JAVA compatibility issue or not?
whole genome-based phylogeny java tree realphy written 4 months ago by shibl_a • 20
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0
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197
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0
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Neighbor Joining tree visualization
R tree nj written 5 months ago by User000 • 260 • updated 5 months ago by RamRS ♦ 20k
36
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5
answers
4.0k
views
6 follow
5
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NCBI Taxonomy Comparison
taxonomy tree comparison written 8.7 years ago by Yannick Wurm • 2.3k • updated 5 months ago by RamRS ♦ 20k
3
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2
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4.3k
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2
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Construct Newick Tree from tab-delimited or csv file of phylogeny, preferably in Python
phylogeny python tree newick written 4.4 years ago by weslfield • 90 • updated 6 months ago by Biostar ♦♦ 20
0
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0
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180
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0
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Why does clustalo guidetree have negative values for branch lengths?
clustalo clustal alignment tree written 6 months ago by O.rka • 70
0
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0
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517
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0
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how to find lineage specific dissimilar regions in an alignment?
phylogeny conservation alignment tree written 16 months ago by Elendol • 0 • updated 6 months ago by Biostar ♦♦ 20
12
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1
answer
846
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1
answer
Figtree - Make branches the same colour as their tip labels
phylogeny tree figtree written 6 months ago by wl284 • 40
0
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0
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356
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0
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Direct vs Indirect annotations of a term in GO (Gene Ontology) Database
tree go written 7 months ago by nkhan.mscs15seecs • 30 • updated 6 months ago by Biostar ♦♦ 20
1
vote
1
answer
334
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1
answer
Compare topologies of trees with non-identical tip labels
R topology dendextend tanglegram tree written 7 months ago by al-ash • 100 • updated 7 months ago by jhc • 2.8k
1
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1
answer
194
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1
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Calculating tree diameter
alignment phylogenetics tree graph theory written 7 months ago by jrj.healey ♦ 11k
0
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0
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342
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0
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how to make bootstrapped tree using PLINK files?
tree snp plink written 7 months ago by HG • 20 • updated 7 months ago by Kevin Blighe ♦ 37k
2
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0
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300
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0
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Generate all NNI-neighbours of a tree
nni phylogenetics tree newick written 8 months ago by phylomat • 0
1
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1
answer
255
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1
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Change nexus textlabels
R nexus tree bash written 9 months ago by User000 • 260 • updated 9 months ago by Anima Mundi • 2.4k
0
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1
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320
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1
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looking for a tree viewer useful for .con.tre file outputted from MrBayes
mrbayes viewer tree treeviewer written 9 months ago by ricfoz • 20 • updated 9 months ago by Kevin Blighe ♦ 37k
0
votes
1
answer
332
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1
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Convert tree confidence values to integers
confidence tree bootstrap written 12 months ago by roussine • 0
1
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0
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622
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0
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What software to choose to do reference-assisted Birch Betula chloroplast genome assembly and subsequent annotation?
de novo assembly tree plant written 12 months ago by oxfordsoccer • 10
54
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8
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17k
views
26 follow
8
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Phylogenetic Analysis Of Whole Genomes
phylogenetics tree written 8.6 years ago by Aparna • 120 • updated 12 months ago by Eli Korvigo • 150
4
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1
answer
641
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1
answer
if you were making evolutionary trees how would you make sure they were accurate and not based on convergent evolution?
evolution phylogenetics convergent evolution tree written 2.2 years ago by nhilaski • 0 • updated 12 months ago by Biostar ♦♦ 20
2
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2
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497
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2
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Annotation of taxonomy information in phylogeny tree
phylogeny annotation tree ete written 13 months ago by arunprasanna83 • 30 • updated 13 months ago by jhc • 2.8k
0
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1
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1.4k
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1
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Visualize Tree In Phylobayes
visualization tree written 5.0 years ago by ce13210 • 0 • updated 14 months ago by Biostar ♦♦ 20
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