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2
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0
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119
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0
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how many genomes from BLAST hit should be considered for phylogeny tree analysis?
phylogeny genome taxonomy tree written 12 days ago by DanielC • 100 • updated 2 days ago by Biostar ♦♦ 20
2
votes
0
answers
111
views
0
answers
Tool: Mashtree tool for rapid WGS dendrograms
tool quick perl dendrogram multithreaded tree written 5 weeks ago by Lee Katz • 3.0k
0
votes
1
answer
107
views
1
answer
How draw Phylogeny tree using genotype file?
phylogenic_tree R tree phylogenetic written 6 weeks ago by star • 190 • updated 6 weeks ago by YJ • 0
1
vote
3
answers
1.0k
views
3
answers
View large phylogentic tree software advise
software phylogentics tree written 4.4 years ago by cara78 • 10 • updated 7 weeks ago by juanjo75es • 60
8
votes
2
answers
1.3k
views
2
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Replace Sequence IDs in many text files (newick format) - Change script
perl replace tree newick written 2.6 years ago by ibasan • 40 • updated 7 weeks ago by Biostar ♦♦ 20
0
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0
answers
227
views
0
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Problem with font size in a tree
interaction fontsize cophyloplot tree written 9 weeks ago by luzglongoria • 20
0
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0
answers
116
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0
answers
Circular phylogenetic tree with links between leaves
phylogenetic circos tree plot written 11 weeks ago by juan.crescente • 20
6
votes
0
answers
214
views
5 follow
0
answers
PCA cannot separate different breeds
wgs pca admix snp tree written 3 months ago by micro32uvas • 10 • updated 3 months ago by RamRS ♦ 24k
0
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2
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2.5k
views
2
answers
Robinson-Foulds Distance : Number Of Trees At Distance K From A Fixed Tree
phylogeny tree written 5.7 years ago by manuellafond • 0 • updated 4 months ago by leonardini • 0
1
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0
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357
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0
answers
RAxML output and tree construction
phylogeny tree proteins written 5 months ago by yp19 • 50 • updated 5 months ago by h.mon ♦ 27k
54
votes
9
answers
18k
views
27 follow
9
answers
Phylogenetic Analysis Of Whole Genomes
phylogenetics tree written 9.2 years ago by Aparna • 120 • updated 5 months ago by rm.umayal24 • 0
0
votes
1
answer
956
views
1
answer
Reduced versions of the 23MB tree by scripts?
phylogeny treeoflife tree newick written 3.9 years ago by monstercolorfun • 10 • updated 6 months ago by Biostar ♦♦ 20
1
vote
1
answer
268
views
1
answer
Complete phylogenetic trees?
phylogenetic tree of life taxonomy tree written 7 months ago by gtrwst9 • 0
0
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0
answers
372
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0
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combining phylogenetic trees into a consensus super Tree
phylogenetics tree written 7 months ago by Moses • 70
1
vote
1
answer
326
views
1
answer
Extract species tree from the Ensembl Compara database
ensembl database tree written 8 months ago by BlastedBadger • 70 • updated 8 months ago by Emily_Ensembl ♦ 19k
0
votes
0
answers
263
views
0
answers
How to build a phylogenetic tree (breast cancer samples)
phylogenetic phylogenetics tree written 8 months ago by Pin.Bioinf • 260
0
votes
0
answers
362
views
0
answers
Generate all possible bifurkating newick trees for N taxa
generate tree newick written 10 months ago by al-ash • 110
2
votes
2
answers
363
views
2
answers
plot and show support values in consensus tree from n nj euclidean distance matrix replicates
nj phylo tree euclidean ape written 9 months ago by jlsovaz • 0
0
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0
answers
265
views
0
answers
Phylogenic tree - genetic distance bigger than 1
sequence phylogenic alignment tree written 9 months ago by jduc • 0
0
votes
0
answers
561
views
0
answers
Combine node/branch labels from multiple trees into one
annotation label tree treegraph2 written 10 months ago by al-ash • 110
3
votes
0
answers
289
views
0
answers
What is the standard way of preparing homolog sequences for a phylogenetic analysis?
phylogenetic homolog tree written 11 months ago by johnnytam100 • 100
0
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0
answers
274
views
0
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Where to save metadata about trees in a nexus file?
nexus tree written 11 months ago by hyanwong • 70
0
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0
answers
316
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0
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Displaying a controversial phylogenetic tree as a network to explicitate noise-generating branches
genome network tree phylogenesis convert written 14 months ago by Macspider • 3.0k • updated 11 months ago by Biostar ♦♦ 20
14
votes
5
answers
5.6k
views
6 follow
5
answers
Verifying Phylogeny Trees
phylogenetics tree written 8.9 years ago by Jamand • 110 • updated 12 months ago by Biostar ♦♦ 20
0
votes
1
answer
264
views
1
answer
REALPHY and JAVA compatibility issue or not?
whole genome-based phylogeny java tree realphy written 12 months ago by shibl_a • 20
0
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0
answers
458
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0
answers
Neighbor Joining tree visualization
R tree nj written 13 months ago by User000 • 270 • updated 13 months ago by RamRS ♦ 24k
36
votes
5
answers
4.2k
views
6 follow
5
answers
NCBI Taxonomy Comparison
taxonomy tree comparison written 9.3 years ago by Yannick Wurm • 2.3k • updated 13 months ago by RamRS ♦ 24k
3
votes
2
answers
4.9k
views
2
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Construct Newick Tree from tab-delimited or csv file of phylogeny, preferably in Python
phylogeny python tree newick written 5.1 years ago by weslfield • 90 • updated 14 months ago by Biostar ♦♦ 20
0
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0
answers
304
views
0
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Why does clustalo guidetree have negative values for branch lengths?
clustalo clustal alignment tree written 14 months ago by O.rka • 120
0
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0
answers
659
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0
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how to find lineage specific dissimilar regions in an alignment?
phylogeny conservation alignment tree written 24 months ago by Elendol • 0 • updated 14 months ago by Biostar ♦♦ 20
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