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<prev • 24 results • page 1 of 1 • next >
11
votes
2
answers
199
views
5 follow
2
answers
How to speed up trimming using trim galorer
fastq rna-seq trim written 4 weeks ago by lamia_203 • 30 • updated 4 weeks ago by mbk0asis • 410
0
votes
0
answers
139
views
0
answers
Trim fasta to a specific gene location
fasta alignment sequence trim bash written 3 months ago by James • 20
5
votes
1
answer
254
views
1
answer
Have bbduk retain quality scores in output after kmer trimming
bbmap trim primer written 5 months ago by caverill • 40
1
vote
1
answer
973
views
1
answer
trimming RNA-seq reads with adapter sequence?index? using trimmomatic
trimmomatic adapter rna-seq trim written 14 months ago by woongjaej • 10 • updated 14 months ago by Jake Warner • 680
4
votes
2
answers
864
views
2
answers
Trimming reads with prinseq
reads preprocessing prinseq qual trim written 15 months ago by deepti1rao • 20
6
votes
2
answers
848
views
5 follow
2
answers
error while using cutadapt
trim cutadapt written 15 months ago by KVC_bioinfo • 350 • updated 15 months ago by chen • 1.8k
6
votes
1
answer
1.5k
views
1
answer
trimming nano pore reads based on quality score.
nanopore trim written 15 months ago by KVC_bioinfo • 350 • updated 15 months ago by WouterDeCoster ♦ 36k
1
vote
0
answers
511
views
0
answers
Trim read-specific adapter in paired-end reads
adapter trim written 15 months ago by Nicolas Rosewick ♦ 7.3k
0
votes
1
answer
782
views
1
answer
Is it possible/recommended to trim RNA-Seq reads to a specific length
star-fusion chimerascan trim rna-seq written 23 months ago by komal.rathi • 3.4k • updated 21 months ago by Biostar ♦♦ 20
1
vote
0
answers
908
views
0
answers
trimming reads from miseq
duplcation level miseq trim fastqc written 22 months ago by mary • 0
1
vote
0
answers
1.6k
views
0
answers
Trim Reads From BAM files
bamutil bam trim written 24 months ago by fusion.slope • 200 • updated 23 months ago by Biostar ♦♦ 20
2
votes
1
answer
898
views
1
answer
trim special lenght from special tile in a fastq file
tile trim per tile sequence quality written 2.0 years ago by mary • 0 • updated 2.0 years ago by Petr Ponomarenko • 2.6k
1
vote
0
answers
1.7k
views
0
answers
How to trim adapters and remove polyA tails from QuantSeq 3' FWD data
poly-a tails rna-seq trim quantseq written 2.0 years ago by Chloe • 0
3
votes
1
answer
1.4k
views
1
answer
How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 2.0 years ago by blazer9191 • 0 • updated 2.0 years ago by harold.smith.tarheel • 4.3k
2
votes
1
answer
1.1k
views
1
answer
Use Bowtie to trim reads in fastq files
trim bowite written 2.1 years ago by Jackie • 70 • updated 2.1 years ago by Brian Bushnell ♦ 16k
1
vote
0
answers
706
views
0
answers
trimming more than two paired mates
fastq trim written 2.3 years ago by igor ♦ 7.3k
2
votes
2
answers
1.1k
views
2
answers
Should I trim both R1 and R2 if only R2's quality is poor?
reads trimming trim fastqc written 2.7 years ago by Vijay Lakhujani ♦ 3.6k • updated 2.7 years ago by igor ♦ 7.3k
10
votes
1
answer
2.3k
views
1
answer
Tutorial: Trim & align paired-end reads in a single pass
tutorial paired-end fastq trim align pipe written 2.7 years ago by dariober ♦ 9.9k
4
votes
3
answers
2.7k
views
3
answers
Interpretation of FASTQC results - do I need to trim my sequence?
assembly sequencing trim illumina fastqc written 2.9 years ago by sallyanndunn18 • 0 • updated 2.9 years ago by chen • 1.8k
6
votes
1
answer
1.1k
views
1
answer
Fa list for illumina sequencing adapters
illumina adapter trim sequencing written 3.3 years ago by Shicheng Guo • 7.4k • updated 3.3 years ago by h.mon ♦ 23k
0
votes
1
answer
1.4k
views
1
answer
Cutadapt list of adapter
list of adapter trim cutadapt written 3.4 years ago by pingEde • 20 • updated 3.4 years ago by Pierre Lindenbaum ♦ 116k
0
votes
0
answers
1.1k
views
0
answers
Trim barcode 3'
barcode primer trim cutadapt written 3.4 years ago by pingEde • 20 • updated 3.4 years ago by SES ♦ 8.1k
9
votes
3
answers
11k
views
7 follow
3
answers
Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 4.5 years ago by RafaelMP • 100 • updated 4.5 years ago by Jeff Stafford • 50
3
votes
3
answers
3.2k
views
3
answers
Trim sequences in FASTA file from sanger sequencing
sanger sequencing trim nnnn written 4.9 years ago by merajazizmeraj • 20
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