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<prev • 27 results • page 1 of 1 • next >
2
votes
0
answers
85
views
0
answers
flexbar for many files
adapter flexbar rna-seq trim written 4 weeks ago by charadriussp • 0
0
votes
1
answer
180
views
1
answer
primer trimming on katana
ngs katana primer trim written 8 months ago by shigej38 • 0
0
votes
1
answer
444
views
1
answer
How to trim primers with cutadapt from .fastq.gz file?
primer tool trim cutadapt written 8 months ago by bayramliaziz • 0 • updated 8 months ago by finswimmer ♦ 13k
10
votes
5
answers
13k
views
10 follow
5
answers
Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 5.3 years ago by RafaelMP • 110 • updated 9 months ago by genomax ♦ 75k
11
votes
2
answers
859
views
5 follow
2
answers
How to speed up trimming using trim galorer
fastq rna-seq trim written 10 months ago by lamia_203 • 30 • updated 10 months ago by mbk0asis • 470
0
votes
0
answers
265
views
0
answers
Trim fasta to a specific gene location
fasta alignment sequence trim bash written 12 months ago by James • 20
5
votes
1
answer
482
views
1
answer
Have bbduk retain quality scores in output after kmer trimming
bbmap trim primer written 14 months ago by caverill • 40
1
vote
1
answer
1.5k
views
1
answer
trimming RNA-seq reads with adapter sequence?index? using trimmomatic
trimmomatic adapter rna-seq trim written 2.0 years ago by woongjaej • 10 • updated 2.0 years ago by Jake Warner • 780
4
votes
2
answers
1.3k
views
2
answers
Trimming reads with prinseq
reads preprocessing prinseq qual trim written 2.0 years ago by deepti1rao • 30
6
votes
2
answers
1.2k
views
5 follow
2
answers
error while using cutadapt
trim cutadapt written 2.1 years ago by KVC_bioinfo • 410 • updated 2.1 years ago by chen • 1.9k
7
votes
1
answer
2.6k
views
1
answer
trimming nano pore reads based on quality score.
nanopore trim written 2.1 years ago by KVC_bioinfo • 410 • updated 2.1 years ago by WouterDeCoster ♦ 42k
1
vote
0
answers
786
views
0
answers
Trim read-specific adapter in paired-end reads
adapter trim written 2.1 years ago by Nicolas Rosewick ♦ 8.5k
0
votes
1
answer
957
views
1
answer
Is it possible/recommended to trim RNA-Seq reads to a specific length
star-fusion chimerascan trim rna-seq written 2.7 years ago by komal.rathi • 3.5k • updated 2.5 years ago by Biostar ♦♦ 20
1
vote
0
answers
1.3k
views
0
answers
trimming reads from miseq
duplcation level miseq trim fastqc written 2.7 years ago by mary • 0
1
vote
0
answers
2.2k
views
0
answers
Trim Reads From BAM files
bamutil bam trim written 2.8 years ago by fusion.slope • 200 • updated 2.7 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.2k
views
1
answer
trim special lenght from special tile in a fastq file
tile trim per tile sequence quality written 2.8 years ago by mary • 0 • updated 2.8 years ago by Petr Ponomarenko • 2.6k
1
vote
0
answers
2.3k
views
0
answers
How to trim adapters and remove polyA tails from QuantSeq 3' FWD data
poly-a tails rna-seq trim quantseq written 2.8 years ago by Chloe • 0
3
votes
1
answer
1.9k
views
1
answer
How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 2.8 years ago by blazer9191 • 0 • updated 2.8 years ago by harold.smith.tarheel • 4.5k
2
votes
1
answer
1.4k
views
1
answer
Use Bowtie to trim reads in fastq files
trim bowite written 2.8 years ago by Jackie • 70 • updated 2.8 years ago by Brian Bushnell ♦ 17k
1
vote
0
answers
827
views
0
answers
trimming more than two paired mates
fastq trim written 3.1 years ago by igor ♦ 8.9k
2
votes
2
answers
1.5k
views
2
answers
Should I trim both R1 and R2 if only R2's quality is poor?
reads trimming trim fastqc written 3.5 years ago by lakhujanivijay ♦ 4.6k • updated 3.5 years ago by igor ♦ 8.9k
10
votes
1
answer
2.8k
views
1
answer
Tutorial: Trim & align paired-end reads in a single pass
tutorial paired-end fastq trim align pipe written 3.5 years ago by dariober ♦ 10k
6
votes
3
answers
3.5k
views
3
answers
Interpretation of FASTQC results - do I need to trim my sequence?
assembly sequencing trim illumina fastqc written 3.7 years ago by sallyanndunn18 • 10 • updated 3.7 years ago by chen • 1.9k
6
votes
1
answer
1.3k
views
1
answer
Fa list for illumina sequencing adapters
illumina adapter trim sequencing written 4.1 years ago by Shicheng Guo • 7.8k • updated 4.1 years ago by h.mon ♦ 28k
0
votes
1
answer
1.6k
views
1
answer
Cutadapt list of adapter
list of adapter trim cutadapt written 4.2 years ago by pingEde • 30 • updated 4.2 years ago by Pierre Lindenbaum ♦ 124k
0
votes
0
answers
1.2k
views
0
answers
Trim barcode 3'
barcode primer trim cutadapt written 4.2 years ago by pingEde • 30 • updated 4.2 years ago by SES ♦ 8.2k
3
votes
3
answers
3.8k
views
3
answers
Trim sequences in FASTA file from sanger sequencing
sanger sequencing trim nnnn written 5.6 years ago by merajazizmeraj • 20
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