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<prev • 31 results • page 1 of 2 • next >
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Trim_galore with gnu parallel
fastq parallel trim_galore rna-seq trim written 4 weeks ago by francesca3 • 30
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2
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284
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2
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Trim 3' ends from single-end reads
3' end single-end read trim written 4 months ago by Maria • 0
1
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1
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184
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1
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Trimmomatic trims most of the reverse strand
trimmomatic fastq trim bwa written 4 months ago by hkarakurt • 110 • updated 4 months ago by GenoMax ♦ 96k
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1
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543
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1
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ATAC-Seq kmer removal
kmers fastqc atac-seq trim cutadapt written 12 months ago by elenichri • 10 • updated 12 months ago by h.mon ♦ 32k
2
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0
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654
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flexbar for many files
adapter flexbar rna-seq trim written 16 months ago by charadriussp • 0
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1
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318
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1
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primer trimming on katana
ngs katana primer trim written 23 months ago by shigej38 • 0
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1
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1
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How to trim primers with cutadapt from .fastq.gz file?
primer tool trim cutadapt written 23 months ago by bayramliaziz • 0 • updated 23 months ago by finswimmer ♦ 14k
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5
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10 follow
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Trimming fastq with quality
fastq fastx rna-seq trim fastqc written 6.6 years ago by RafaelMP • 110 • updated 2.0 years ago by GenoMax ♦ 96k
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5 follow
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How to speed up trimming using trim galorer
fastq rna-seq trim written 2.1 years ago by lamia_203 • 90 • updated 2.1 years ago by mbk0asis • 610
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429
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Trim fasta to a specific gene location
fasta alignment sequence trim bash written 2.3 years ago by James • 20
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1
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1
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Have bbduk retain quality scores in output after kmer trimming
bbmap trim primer written 2.5 years ago by caverill • 40
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2.3k
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1
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trimming RNA-seq reads with adapter sequence?index? using trimmomatic
trimmomatic adapter rna-seq trim written 3.3 years ago by woongjaej • 20 • updated 3.3 years ago by Jake Warner • 810
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2
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2.1k
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Trimming reads with prinseq
reads preprocessing prinseq qual trim written 3.3 years ago by deepti1rao • 30
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2
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5 follow
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error while using cutadapt
trim cutadapt written 3.3 years ago by KVC_bioinfo • 530 • updated 3.3 years ago by chen • 2.1k
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1
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4.4k
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1
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trimming nano pore reads based on quality score.
nanopore trim written 3.3 years ago by KVC_bioinfo • 530 • updated 3.3 years ago by WouterDeCoster ♦ 45k
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1.2k
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0
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Trim read-specific adapter in paired-end reads
adapter trim written 3.3 years ago by Nicolas Rosewick ♦ 9.3k
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1
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1.2k
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1
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Is it possible/recommended to trim RNA-Seq reads to a specific length
star-fusion chimerascan trim rna-seq written 4.0 years ago by komal.rathi • 3.7k • updated 3.8 years ago by Biostar ♦♦ 20
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1.7k
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trimming reads from miseq
duplcation level miseq trim fastqc written 3.9 years ago by mary • 0
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Trim Reads From BAM files
bamutil bam trim written 4.0 years ago by fusion.slope • 240 • updated 3.9 years ago by Biostar ♦♦ 20
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1
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1.5k
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1
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trim special lenght from special tile in a fastq file
tile trim per tile sequence quality written 4.1 years ago by mary • 0 • updated 4.1 years ago by Petr Ponomarenko • 2.7k
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How to trim adapters and remove polyA tails from QuantSeq 3' FWD data
poly-a tails rna-seq trim quantseq written 4.1 years ago by Chloe • 0
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1
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2.6k
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1
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How to clean bad tiles from Illumina reads?
illumina quality rna-seq trim fastqc written 4.1 years ago by blazer9191 • 0 • updated 4.1 years ago by harold.smith.tarheel • 4.6k
2
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1
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1.9k
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1
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Use Bowtie to trim reads in fastq files
trim bowite written 4.1 years ago by Jackie • 70 • updated 4.1 years ago by Brian Bushnell ♦ 17k
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trimming more than two paired mates
fastq trim written 4.3 years ago by igor ♦ 12k
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2
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Should I trim both R1 and R2 if only R2's quality is poor?
reads trimming trim fastqc written 4.7 years ago by lakhujanivijay ♦ 5.4k • updated 4.7 years ago by igor ♦ 12k
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1
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Tutorial: Trim & align paired-end reads in a single pass
tutorial paired-end fastq trim align pipe written 4.7 years ago by dariober ♦ 11k
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3
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4.8k
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3
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Interpretation of FASTQC results - do I need to trim my sequence?
assembly sequencing trim illumina fastqc written 4.9 years ago by sallyanndunn18 • 10 • updated 4.9 years ago by chen • 2.1k
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1
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1
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Fa list for illumina sequencing adapters
illumina adapter trim sequencing written 5.3 years ago by Shicheng Guo • 8.6k • updated 5.3 years ago by h.mon ♦ 32k
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2.0k
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1
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Cutadapt list of adapter
list of adapter trim cutadapt written 5.5 years ago by pingEde • 40 • updated 5.5 years ago by Pierre Lindenbaum ♦ 134k
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Trim barcode 3'
barcode primer trim cutadapt written 5.5 years ago by pingEde • 40 • updated 5.5 years ago by SES ♦ 8.4k
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