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<prev • 152 results • page 1 of 6 • next >
1
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86
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Trimming fastq up until a sequence
trimming fastq sequencing written 18 days ago by SemiQuant • 70
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0
answers
86
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prinseq and sickle
installation trimming sequencing written 4 weeks ago by kanyerezi30 • 0
4
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7
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7.5k
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7
answers
Best trimming tool
trimming written 4.0 years ago by int11ap1 • 390 • updated 8 weeks ago by Lakshman Teja • 40
1
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0
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182
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0
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Extract gRNA sequence using cutadapt
crispr trimming cutadapt sequencing written 3 months ago by Swimming bird • 20
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1.3k
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6 follow
0
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Trimmomatic: Higher number of "forward only" than "reverse only" surviving reads
trimming rna-seq written 18 months ago by Lucila • 20 • updated 3 months ago by nidhi.vijayan13 • 20
1
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1
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Is read trimming needed for WGBS (bisulfite) data?
bisufite trimming alignment wgbs written 3 months ago by Chris Miller ♦ 21k • updated 3 months ago by Devon Ryan ♦ 94k
4
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2
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206
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5 follow
2
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Trim adapter of undefined length
adapter trimming short read written 4 months ago by julia.mir • 0 • updated 3 months ago by genomax ♦ 78k
1
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1
answer
172
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1
answer
miRNA fastqc sequence length distribution with UMI
qiagene trimming fastqc mirna cutadapt written 4 months ago by maria2019 • 90 • updated 4 months ago by swbarnes2 ♦ 7.4k
3
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2
answers
177
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2
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FASTX Trimming First and Last X Bases
fastq fastx trimming written 4 months ago by gtasource • 30 • updated 4 months ago by genomax ♦ 78k
1
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0
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257
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0
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BBDuk does not remove all adapters
trimming bbduk rna-seq truseq adapters written 5 months ago by f.dinesh • 0 • updated 5 months ago by genomax ♦ 78k
1
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1
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350
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1
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Length of the amplicon after trimming
trimming written 14 months ago by life99945 • 10 • updated 5 months ago by lieven.sterck ♦ 6.9k
3
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2
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365
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2
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How to figure out which adapter has been used
adapter trimming degradome written 11 months ago by juan.crescente • 20
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0
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342
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0
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Trimming adaptors with trimmomatic
trimming rna-seq written 7 months ago by Rimma • 20 • updated 7 months ago by h.mon ♦ 29k
0
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0
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172
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0
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Could my primers not have trimmed properly?
dada2 trimming its primer written 7 months ago by k-vincent • 0
6
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2
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306
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2
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Forum: Is trimming always better?
trimmomatic trimming qc forum rna-seq written 7 months ago by Mozart • 140 • updated 7 months ago by genomax ♦ 78k
1
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0
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382
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0
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Removing adaptors from smallRNA seq data
trimming smallrna adaptor written 8 months ago by juan.crescente • 20
2
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2
answers
452
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2
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Find illumina adaptors
rnaseq ilumina trimming cutadapt written 9 months ago by sabaghianamir70 • 10 • updated 9 months ago by chen • 1.9k
1
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1
answer
283
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1
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Trimming adapters required for local alignment?
trimming adapter ngs hicexplorer written 9 months ago by srhic • 0
7
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4
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476
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8 follow
4
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General question about batch effect, read trimming and what to do when the adapter trimming step is not working appropriately.
trimmomatic adapters trimming rna-seq written 10 months ago by Mozart • 140 • updated 9 months ago by swbarnes2 ♦ 7.4k
3
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1
answer
405
views
1
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reliable way to trim
trimming radseq written 10 months ago by gbl1 • 70 • updated 10 months ago by genomax ♦ 78k
0
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1
answer
397
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1
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working with Sanger fasta + qual + clip files
sanger trimming fastq written 11 months ago by sullis02 • 0 • updated 11 months ago by JC ♦ 9.5k
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1
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1.2k
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1
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Novaseq 6000 paired end data Trimming and clipping
novaseq adapters trimming rna-seq filtering written 11 months ago by ignazio.fontana • 0
5
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1
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1.2k
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1
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What sequences should I use for ATAC-Seq adapter trimming using trimmomatic 0.36?
trimmomatic trimming adapter atac-seq written 11 months ago by Gary • 480 • updated 11 months ago by h.mon ♦ 29k
7
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1
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2.0k
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1
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Suggestions for Trimmomatic and "illuminaclip" parameter
trimmomatic trimming illuminaclip rna-seq written 11 months ago by Batu • 170 • updated 11 months ago by caggtaagtat • 930
1
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1
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567
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1
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Remove low quality base calls from reads
trimming alignment trim_galore variant calls written 12 months ago by kspata • 70 • updated 12 months ago by manuel.belmadani • 1.2k
0
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0
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753
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0
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PacBio raw data trimming and cleaning
trimming qc cleaning pacbio written 12 months ago by misterie • 90
5
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1
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809
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1
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Trimmomatic "no such file or directory" error with reverse input
trimmomatic trimming written 13 months ago by emilyc • 10 • updated 13 months ago by finswimmer ♦ 13k
1
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0
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848
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0
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trimmomatic: command not found
software error trimming written 14 months ago by SeaStar • 20
0
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0
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439
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0
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Barcode cross contamination
barcode trimming written 14 months ago by Seigfried • 70
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0
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358
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0
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Trimmomatic confirmation, multiple indeces per sample?!
trimmomatic rnaseq trimming written 14 months ago by T_18 • 40 • updated 14 months ago by finswimmer ♦ 13k
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