Showing: trimmingreset
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working with Sanger fasta + qual + clip files
sanger trimming fastq written 5 days ago by sullis020 • updated 5 days ago by JC7.6k
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How to figure out which adapter has been used
adapter trimming degradome written 5 days ago by juan.crescente20 • updated 5 days ago by genomax64k
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Suggestions for Trimmomatic and "illuminaclip" parameter
trimmomatic trimming illuminaclip rna-seq written 27 days ago by Batu110 • updated 27 days ago by caggtaagtat470
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Remove low quality base calls from reads
trimming alignment trim_galore variant calls written 7 weeks ago by kspata40 • updated 7 weeks ago by manuel.belmadani580
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Trimmomatic "no such file or directory" error with reverse input
trimmomatic trimming written 11 weeks ago by emilyc0 • updated 11 weeks ago by finswimmer11k
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Barcode cross contamination
barcode trimming written 3 months ago by Seigfried70
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Trimmomatic confirmation, multiple indeces per sample?!
trimmomatic rnaseq trimming written 3 months ago by T_1820 • updated 3 months ago by finswimmer11k
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FastQC report about WGBS.
trimming wgbs written 2.6 years ago by hxlei61380 • updated 5 months ago by Biostar ♦♦ 20
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Illumina Trimming Algorithm
python trimming illumina written 8.7 years ago by Science_Robot1.1k • updated 6 months ago by RamRS20k
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When do you strictly need to know the adapter sequence to trim NGS data?
trimming ngs adapter written 7 months ago by MAPK1.4k • updated 7 months ago by Gjain5.3k
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Metagenomics: rationale behind Q trimming
illumina metagenomics bbduk quality trimming written 8 months ago by f.a.galkin30 • updated 8 months ago by finswimmer11k
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Small RNAseq data with untrimmed reads left after trimming process
adapters trimming smallrnaseq rna-seq written 8 months ago by MAPK1.4k • updated 8 months ago by h.mon24k
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Adapter trimming of small RNAseq data
adapter smallrnaseq trimming rna-seq written 8 months ago by MAPK1.4k • updated 8 months ago by Brad Langhorst110
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Leftover adapter sequences after Trimmomatic trimming?
trimmomatic adapters trimming rna-seq written 8 months ago by annsun8910 • updated 8 months ago by genomax64k
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Cutadapt for paired end RRBS data
trimming rrbs cutadapt written 9 months ago by anikb10 • updated 9 months ago by Devon Ryan88k
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Poly A trimming from RNA-seq data by bbduk (bbmap package)
polya trimming bbduk bbmap rna-seq written 10 months ago by seta1.1k • updated 10 months ago by WouterDeCoster37k
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metagenomic assembly has low coverage; what are my options?
assembly trimming metagenomic coverage megahit written 11 months ago by willnotburn40 • updated 11 months ago by h.mon24k
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Trimming single end reads for STAR?
trimming star rna-seq written 12 months ago by caggtaagtat470 • updated 12 months ago by h.mon24k
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