Showing: tssreset
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Refseq TSS vs Ensemble TSS
homer ensemble refseq tss written 12 weeks ago by srhic0
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2
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1
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211
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HOMER tss command not working
homer chip-seq tss written 3 months ago by carlee.bettler10 • updated 3 months ago by arup1.9k
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163
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MACS2 transcription start site analysis of .BAM files
macs2 chip-seq tss written 3 months ago by carlee.bettler10 • updated 3 months ago by ATpoint26k
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261
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what is the best way to calculate significant differences in tss profiles?
differences coverage tss written 8 months ago by Lila M 800 • updated 6 months ago by Biostar ♦♦ 20
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Understanding FANTOM5 CAGE fields
transcription rna-seq tss written 9 months ago by simplitia30 • updated 9 months ago by kristoffer.vittingseerup2.6k
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TSS sites of GRCM38
chip-seq tss written 10 months ago by kanwarjag1.0k
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Extracting Flanking Regions across TSS using R scripts
R bioconductor tss coding ensembl written 11 months ago by r.tor40 • updated 11 months ago by bernatgel2.2k
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TSS Enrichment Score Tool
tool rna-seq tss written 12 months ago by BioICoder40 • updated 12 months ago by h.mon28k
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List of TSS from GTF file
gtf tss written 19 months ago by Roman Hillje40 • updated 19 months ago by Alex Reynolds29k
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Arabidopsis Thaliana genomic features
tss thaliana arabidopsis tts genomic features cpg written 20 months ago by dzisis198620 • updated 20 months ago by lieven.sterck6.3k
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556
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How RnBeads define promoters?
promoters rnbeads tss written 23 months ago by sugus40 • updated 22 months ago by Santosh Anand5.0k
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How to retrieve TSS data from CAGEr?
tss cager written 22 months ago by 1112204100
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all posible sequences from consensus
consensus python sequence tss dna written 2.0 years ago by hgarza0 • updated 2.0 years ago by Pierre Lindenbaum124k
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Prediction of TSS from tuxedo pipeline
tuxedo rna-seq tss written 2.5 years ago by bioinfo_ga20 • updated 2.5 years ago by jnoble33320
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Determine promoter regions relative to TSS.
upstream promoter downstream tss written 2.7 years ago by robbenstijn0 • updated 2.7 years ago by bharata1803440
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758
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select -500 from the TSS to +500 after the TES strand +/-
strand sequencing coverage tes tss written 2.7 years ago by Lila M 800 • updated 2.7 years ago by Alex Reynolds29k
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How to identify TSS sites from bacterial RNA-Seq data?
rna-seq tss written 2.9 years ago by R.Blues90 • updated 2.9 years ago by Charles Plessy2.7k
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Detecting bacterial TSS from RNA-Seq data, how?
bacteria rna-seq tss written 3.2 years ago by R.Blues90 • updated 3.0 years ago by Biostar ♦♦ 20
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Hg38 TSS .bed/.gtf file for chipseq analysis
gtf assembly tss chip-seq bed written 3.4 years ago by satishedu0 • updated 3.4 years ago by Devon Ryan92k
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Making TSS plots for some genes for a particular histone mark
chip-seq tss written 4.3 years ago by Varun Gupta1.1k • updated 3.8 years ago by Biostar ♦♦ 20
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coordinates for Transposable Elements
te tss written 3.9 years ago by kanwarjag1.0k • updated 3.9 years ago by Michael Dondrup46k
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Generating Gencode TSS file
gencode tss written 4.0 years ago by dally180 • updated 4.0 years ago by Biostar ♦♦ 20
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Novel TSS in Cufflinks - false positives adjacent to reference
cufflinks alignment rna-seq tss written 4.0 years ago by Chris Gene60 • updated 4.0 years ago by Devon Ryan92k
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