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430
votes
18
answers
36k
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200 follow
18
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News: The Biostar Handbook. A bioinformatics e-book for beginners.
tutorial news training handbook written 2.4 years ago by Istvan Albert ♦♦ 80k • updated 5 hours ago by Baby Bioinformatician • 20
174
votes
3
answers
49k
views
173 follow
3
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Tutorial: Survival analysis of TCGA patients integrating gene expression (RNASeq) data
tutorial tcga rna-seq survival written 3.7 years ago by TriS • 3.7k • updated 4 days ago by my6 • 0
0
votes
0
answers
74
views
0
answers
Variant Functional Prediction
tutorial variant functional prediction written 12 days ago by uzairzahidmughal • 0 • updated 12 days ago by Benn ♦ 6.6k
81
votes
1
answer
10.0k
views
66 follow
1
answer
Tutorial: Network plot from expression data in R using igraph
R network tutorial rna-seq microarray written 17 months ago by Kevin Blighe ♦ 41k
44
votes
0
answers
2.8k
views
52 follow
0
answers
Tutorial: Pathway Enrichment Analysis, Clustering and Scoring with pathfindR
pathway R tutorial active subnetwork enrichment written 10 months ago by egeulgen • 710
10
votes
2
answers
2.9k
views
7 follow
2
answers
Tutorial: Y-DNA and mtDNA Haplogroup Predictor
tutorial haplogroup written 9 months ago by Shicheng Guo • 7.4k • updated 25 days ago by moxu • 430
22
votes
0
answers
2.5k
views
24 follow
0
answers
Tutorial: R functions for parallel processing
R tutorial biocparallel mclapply foreach written 19 months ago by Kevin Blighe ♦ 41k
8
votes
1
answer
205
views
1
answer
scRNA-seq python tutorial
scrna-seq python tutorial rna-seq written 5 weeks ago by brc • 10 • updated 5 weeks ago by Friederike ♦ 3.6k
43
votes
0
answers
1.7k
views
42 follow
0
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Tutorial: Survival analysis with gene expression
geo survival analysis tutorial gene expression cox written 6 months ago by Kevin Blighe ♦ 41k
31
votes
0
answers
513
views
18 follow
0
answers
Tutorial: Brief Reminder On How To Ask A Good Question
tutorial how-to written 3 months ago by ATpoint ♦ 15k
29
votes
2
answers
9.3k
views
2
answers
Tutorial: TCGA UUIDS to TCGA barcode (SampleID) in R
R tutorial next-gen gdc tcga written 2.5 years ago by martinguerrerog89 • 260 • updated 6 weeks ago by david.peeney • 20
10
votes
0
answers
224
views
9 follow
0
answers
Tutorial: Generating consensus sequence from bam file
fasta consensus tutorial bam written 6 weeks ago by finswimmer ♦ 11k • updated 6 weeks ago by WouterDeCoster ♦ 38k
26
votes
0
answers
3.0k
views
25 follow
0
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Tutorial: Fast download of FASTQ files from the European Nucleotide Archive (ENA)
fastq ena fastq-dump tutorial aspera written 9 months ago by ATpoint ♦ 15k
1
vote
1
answer
149
views
1
answer
public RNAseq data : compare gene expression using RPKM
rpkm tutorial rna-seq anova written 7 weeks ago by dle • 0 • updated 7 weeks ago by Charles Warden ♦ 6.6k
0
votes
1
answer
121
views
1
answer
finding 16S-23S rRNA
gene tutorial written 7 weeks ago by firminlago • 0 • updated 7 weeks ago by ATpoint ♦ 15k
5
votes
0
answers
785
views
7 follow
0
answers
Tutorial: Principles and Workflow of 16S/18S/ITS Amplicon Sequencing
gene tutorial alignment rna-seq sequencing written 5 months ago by contact • 30 • updated 8 weeks ago by al-ash • 100
45
votes
0
answers
3.1k
views
44 follow
0
answers
Tutorial: Creating workflows with snakemake and conda
conda workflow tutorial snakemake written 7 months ago by finswimmer ♦ 11k
2
votes
0
answers
282
views
0
answers
Tutorial: Merging multiple vcf files into Single vcf file
vcf merge bcftools tutorial written 8 weeks ago by jaybee • 10
3
votes
1
answer
155
views
1
answer
MAGI, cBioPortal, GATK, Genepattern, MuTect, Oncotater, MutSigCV
cbioportal tutorial magi mutect mutsigcv written 8 weeks ago by Shicheng Guo • 7.4k
0
votes
0
answers
178
views
0
answers
Tutorial: Introduction to Gen3 Webinar
opensource gen3 datacommons tutorial bigdata written 9 weeks ago by Danielle • 300
3
votes
0
answers
1.9k
views
0
answers
Tutorial: Introduce OpenGene: an open source library for processing NGS data
opengene julia ngs tutorial sequencing written 3.2 years ago by chen • 1.8k • updated 11 weeks ago by sudharshanva • 0
21
votes
0
answers
2.6k
views
31 follow
0
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Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III - Version 2
1000 genomes tutorial pca plink ethnicity written 7 months ago by Kevin Blighe ♦ 41k
3
votes
0
answers
244
views
0
answers
Tutorial: Using Bedtools Closest (closestBed) to make distance histograms of protein binding frequency near all types of pre-RNA junctions (e.g. exon-intron and intron-exon)
bedtools bed bedtools closest closestbed prerna tutorial written 12 weeks ago by linuxborg2 • 0 • updated 11 weeks ago by RamRS ♦ 21k
12
votes
0
answers
702
views
13 follow
0
answers
Tutorial: Modern Statistics for Modern Biology
tutorial statistics written 12 weeks ago by Jean-Karim Heriche ♦ 18k
53
votes
0
answers
7.1k
views
48 follow
0
answers
Tutorial: Produce PCA bi-plot for 1000 Genomes Phase III in VCF format (old)
vcf 1000 genomes tutorial pca plink written 19 months ago by Kevin Blighe ♦ 41k • updated 3 months ago by alicodendrochit • 0
10
votes
3
answers
6.7k
views
3
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Tutorial: Easy way to run easily orthoMCL (Copy & paste)
run tutorial orthomcl mcl easy all-v-all written 2.8 years ago by Esaie • 90 • updated 3 months ago by RamRS ♦ 21k
55
votes
3
answers
7.0k
views
30 follow
3
answers
Tutorial: Minimum Standards For Bioinformatics Command Line Tools
bioinformatics tools command-line tutorial written 5.7 years ago by Medhat ♦ 8.2k
200
votes
9
answers
82k
views
178 follow
9
answers
Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 4.6 years ago by Obi Griffith ♦ 17k • updated 4 months ago by Renesh • 1.6k
2
votes
1
answer
197
views
1
answer
can I identify the function of cluster with high identity of one gene?
gene cluster tutorial antismash genecluster written 4 months ago by jth6974 • 10 • updated 4 months ago by jrj.healey ♦ 11k
39
votes
0
answers
6.9k
views
31 follow
0
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Tutorial: Polish PacBio assembly with latest PacBio tools : an affordable solution for everyone
pbalign tutorial polishing pacbio arrow smrt limk written 19 months ago by Roxane Boyer • 920 • updated 4 months ago by cecilio11 • 40
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