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tutorial • reset332
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16
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16
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written 16 months ago by
Istvan Albert ♦♦ 76k
• updated
5 hours ago by
ashakoor • 0
5
votes
1
answer
3.4k
views
1
answer
144
votes
36
answers
33k
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142 follow
36
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7
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0
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577
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0
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Tutorial:
OrthoMCL installation on Ubuntu Linux
written 3 months ago by
Vimalkumar Velayudhan • 110
41
votes
1
answer
11k
views
1
answer
written 19 months ago by
steve • 1.4k
• updated
13 days ago by
mail2steff • 30
12
votes
0
answers
1.3k
views
14 follow
0
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Tutorial:
Update kraken databases
written 11 months ago by
Sej Modha • 2.8k
6
votes
1
answer
599
views
1
answer
written 3 months ago by
martinguerrerog89 • 250
• updated
4 weeks ago by
Sean Davis ♦ 24k
11
votes
0
answers
872
views
15 follow
0
answers
written 9 weeks ago by
Kevin Blighe ♦ 17k
• updated
6 weeks ago by
bikash2510 • 30
12
votes
0
answers
1.2k
views
0
answers
Tutorial:
Open Targets and programmatic access
written 19 months ago by
Denise - Open Targets • 4.4k
7
votes
0
answers
273
views
8 follow
0
answers
written 9 weeks ago by
Kevin Blighe ♦ 17k
• updated
9 weeks ago by
svlachavas • 360
116
votes
7
answers
34k
views
82 follow
7
answers
Tutorial:
Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Genome Atlas)
written 5.0 years ago by
Cyriac Kandoth ♦ 4.9k
• updated
9 weeks ago by
Shicheng Guo • 4.7k
21
votes
2
answers
2.2k
views
15 follow
2
answers
written 7 months ago by
Roxane Boyer • 510
• updated
10 weeks ago by
elipow1 • 0
1
vote
0
answers
135
views
0
answers
written 11 weeks ago by
anithabioinfor • 0
• updated
11 weeks ago by
Devon Ryan ♦ 78k
47
votes
3
answers
14k
views
42 follow
3
answers
160
votes
8
answers
62k
views
142 follow
8
answers
written 3.7 years ago by
Obi Griffith ♦ 16k
• updated
11 weeks ago by
simplitia • 20
59
votes
1
answer
6.4k
views
60 follow
1
answer
Tutorial:
Exploring cancer mutation data portals
written 3.9 years ago by
Malachi Griffith ♦ 16k
3
votes
0
answers
392
views
0
answers
Tutorial:
Deep Learning for Cancer Immunotherapy
written 11 weeks ago by
Jeremy Leipzig ♦ 17k
0
votes
0
answers
230
views
0
answers
Tutorial:
MWD (Mackinnon, White And Davidson) In R
written 12 weeks ago by
helgasaraswati • 10
0
votes
0
answers
205
views
0
answers
written 12 weeks ago by
marco.guanell • 0
• updated
12 weeks ago by
genomax ♦ 46k
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Recent Replies
-
A: Making reference fasta file from aligned sam file or bed file by
d-cameron • 1.5k
> Is that right approach becuase many amplicons have different locations on same chromosome an...
-
C: Poor Output from Spades with High Coverage Input Data by
h.mon ♦ 13k
Is this DNAseq or RNAseq?
-
C: strand information for SNPs from VCF file (convert into IMPUTE format) by
miaowzai • 40
I found a tool to do this: https://github.com/biocore-ntnu/snpflip
-
C: Sample outlier detection in DESeq2 by
genomax ♦ 46k
For future reference : https://www.biostars.org/p/309884/
-
C: Using rna-STAR on Amazon EC2 instance by
marypthomas88 • 0
Thanks for the feedback. Yes, our pseudo-genome seems small and we assumed we could load this in ...
-
C: Poor Output from Spades with High Coverage Input Data by
genomax ♦ 46k
Not answering your question but you may want to give `tadpole.sh` from [BBMap suite][1] a try. It...
-
C: Making reference fasta file from aligned sam file or bed file by
genomax ♦ 46k
Check `FastaAlternateReferenceMaker` ([part of GATK toolkit][1]) for generating reference. [1...
-
C: Graduate student going into Bioinformatics looking for a new personal laptop. Ma by
genomax ♦ 46k
Rather than a VM you should use [Linux subsystem for Win 10][1]. It is free and provides a native...
-
C: Count the number of reads for multiple genomic locations on different (not all) by
vkgaur25 • 0
This is what happens after no sleep at all. I am so stupid. Thanks a lot @genomax
-
A: Graduate student going into Bioinformatics looking for a new personal laptop. Ma by
marypthomas88 • 0
I am new to bioinformatics; I come from a unix computational science background. When I work, I t...
-
C: UBERON. A way to retrieve relationships? by
Solowars • 30
Hi Kevin, tudo bom? I was thinking of an automatic way to extract the hierarchy of a list of iden...
-
C: UBERON. A way to retrieve relationships? by
Kevin Blighe ♦ 17k
Boa noite, conheço bem a Porto Alegre. You just want to extract the hierarchy of a specific UBERO...
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