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Popular Question to
amy__
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fr
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190
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ResearchR
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mohsamir2016
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andres.firrincieli
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Tasneem Fetian
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Answer: Can any one suggest tools that generate "mind-maps" on concepts in biology/biote
by
Jesse
▴
540
Haven't used it, but I've heard good things about [Obsidian](https://obsidian.md/) as a note-taking tool, and it has [graphing features](ht…
Comment: How to concatenate multiple fasta file
by
shenwei356
8.1k
Another common way:
1. Split by isolates
$ seqkit split --id-regexp "^(.+)_[\w\.]+:.+" --by-id-prefix "" -i merged.fa -O tmp --f…
Comment: Ambient RNA expression correction
by
swbarnes2
13k
Isn't ambient RNA filtered out by keeping only reads with cell barcodes that have a relatively high abundance?
Comment: Panther db Reference List
by
e.r.zakiev
▴
50
Amazing, thank you very much! How did you know where to look??
Comment: Concatenating text files based on common indices
by
Ram
39k
I've removed tags such as `genetics`, `genes` and `bioinformatics`. The last tag makes no sense - ***EVERY QUESTION*** here is related to b…
Comment: Docker Error while running nf-core/rnaseq pipeline
by
ATpoint
72k
No it doesn't. If you setup Docker correctly it works fine on WSL just as on native Linux, I use Docker on WSL2 all the time without proble…
Comment: MACS2 peak calling
by
seidel
11k
What @atpoint said. But given that, getting the distance between features depends on the tool you're using and how you ask questions. The "…
Comment: Colleges
by
Ram
39k
Have you looked at any websites ranking programs available in your colleges of interest? What research have you done into B.Tech/BE program…
Answer: Panther db Reference List
by
GenoMax
129k
Looks like the file for Mouse is available: http://data.pantherdb.org/ftp/sequence_classifications/current_release/PANTHER_Sequence_Classif…
Comment: readGenericHeader() error message Limma
by
Raony Guimarães
★
1.2k
Can you post the error you are getting after renaming the colnames?
Answer: ABO alleles
by
Raony Guimarães
★
1.2k
You could use a tool such as BOOGIE to infer the ABO alleles using VCF files:
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4404330/
Answer: How to determine the exact version of hg38 if I have only the FASTA file
by
Raony Guimarães
★
1.2k
You could use blastn to align your fasta reference against the other common fasta references and find out which one you have:
blast …
Comment: Dada2 in Qiime2: losing reads during merging
by
andres.firrincieli
3.3k
Honestly, I would proceed only with the R1 reads however, you should probably post this question in the qiime2 forum. You can probably find…
Comment: What Are The Most Common Stupid Mistakes In Bioinformatics?
by
Raony Guimarães
★
1.2k
You should also have told the correct command:
grep '>' some.fasta
And yes, of course, I did this before as well :D
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