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352 results • Page
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Tutorial:
Video-tutorials: How to get started using EaSeq for interactive ChIP-seq data visualization and exploration (Windows)
ChIP-Seq
visualization
EaSeq
Tutorial
Windows
6.9 years ago by
Mads Lerdrup
▴ 460
30
votes
14
replies
15k
views
8 follow
Tutorial:
Installation of the MuSiC suite on unsupported Linux distributions
genome-music
linux
smg
updated 5 weeks ago by
Ram
38k • written 10.2 years ago by
Cyriac Kandoth
5.9k
45
votes
14
replies
59k
views
10 follow
Tutorial:
Using R in Conda
R
updated 18 days ago by
Ram
38k • written 2.7 years ago by
rohitsatyam102
▴ 690
7
votes
14
replies
2.1k
views
6 follow
Tutorial:
Install required dependencies for GATK4 on remote server without root privilege
gatk
updated 5 months ago by
Angelina_G
• 0 • written 13 months ago by
thehung92phuyen
▴ 30
17
votes
13
replies
1.7k
views
Tutorial:
Screen shots of text (please don't)!
meta
Forum
Tutorial
6.0 years ago by
Michael D
52k
74
votes
13
replies
65k
views
10 follow
Tutorial:
Machine Learning For Prediction of Relapse in Cancer - Part 2 - Building A Random Forest Classifier
r
cancer
classification
updated 5 months ago by
Ram
38k • written 9.4 years ago by
Nicholas Spies
★ 1.2k
25
votes
13
replies
6.9k
views
9 follow
Tutorial:
How to get FASTQ reads from the Short Read Archive (SRA)
fastq
sra
updated 14 months ago by
liorglic
★ 1.2k • written 17 months ago by
Istvan Albert
97k
63
votes
13
replies
12k
views
11 follow
Tutorial:
Tutorial (How to analyze) on Whole Exome sequencing. Common Errors. Best Practices.
muTect
GATK
Picard
Exome
updated 13 months ago by
Ram
38k • written 8.4 years ago by
Chirag Nepal
★ 2.3k
76
votes
13
replies
14k
views
12 follow
Tutorial:
Exploring cancer mutation data portals
TCGA
Cancer
ICGC
Data-Portal
Mutation
updated 17 months ago by
Ram
38k • written 8.8 years ago by
Malachi Griffith
19k
3
votes
13
replies
9.5k
views
Tutorial:
Merging multiple vcf files into Single vcf file
merge
vcf
bcftools
updated 23 days ago by
Ram
38k • written 4.1 years ago by
jaybee
▴ 140
8
votes
12
replies
6.1k
views
Tutorial:
Create your own VPN to access work resources from home
VPN
OpenVPN
tinyproxy
Tutorial
6.8 years ago by
John
13k
31
votes
12
replies
26k
views
7 follow
Tutorial:
So What Does The Sequence Duplication Rate Really Mean In A Fastqc Report
quality-control
fastqc
updated 4 weeks ago by
Ram
38k • written 9.5 years ago by
Istvan Albert
97k
6
votes
11
replies
4.5k
views
6 follow
Tutorial:
Add count numbers to headers in a fasta file
genome
updated 7 weeks ago by
Ram
38k • written 6.3 years ago by
wu.zhiqiang.1020
▴ 50
16
votes
11
replies
7.3k
views
Tutorial:
How to Use Biostars, Part II: Post types, Deleting, (Un)Subscribing, Linking and Bookmarking
meta
how-to
documentation
18 days ago by
Ram
38k
16
votes
11
replies
13k
views
7 follow
Tutorial:
retrieve full TCGA datasets from cBioportal with R
TCGA
RNA-seq
data-retrieval
cBioportal
R
updated 18 days ago by
Ram
38k • written 6.4 years ago by
TriS
★ 4.6k
12
votes
11
replies
6.6k
views
Tutorial:
How to upload your RNA-Seq data to NCBI Sequence Read Archive (SRA)
NCBI
SRA
Bioproject
BioSample
Tutorial
updated 5.7 years ago by
Lucila
▴ 20 • written 6.1 years ago by
CandiceChuDVM
★ 2.4k
26
votes
10
replies
59k
views
9 follow
Tutorial:
Installing an updated R version (>=4.0) using conda
software-error
R
updated 23 days ago by
Ram
38k • written 2.0 years ago by
Nitin Narwade
★ 1.3k
20
votes
10
replies
4.7k
views
Tutorial:
Finding the significance of the overlap between 2 or more gene sets using simulation in R.
tidyverse
gene
R
updated 18 days ago by
Ram
38k • written 2.6 years ago by
rpolicastro
11k
6
votes
10
replies
4.3k
views
Tutorial:
Differentially methylated regions: Easy & Fast Identification and ANnoTation
DMR
dna-methylation
updated 18 days ago by
Ram
38k • written 5.1 years ago by
dec986
▴ 340
9
votes
9
replies
3.7k
views
Tutorial:
Determine % of reference genome covered by aligned SAM/BAM
ngs
reference coverage
Tutorial
updated 5.5 years ago by
Devon Ryan
103k • written 5.5 years ago by
Kevin Blighe
85k
19
votes
9
replies
6.0k
views
8 follow
Tutorial:
Interactive Perl Learning
perl
updated 4 weeks ago by
Ram
38k • written 9.8 years ago by
Medhat
9.5k
31
votes
9
replies
24k
views
11 follow
Tutorial:
installing samtools with conda - overcoming two common errors
samtools
conda
updated 18 days ago by
Ram
38k • written 2.6 years ago by
lavinia.gordon
▴ 140
65
votes
9
replies
47k
views
7 follow
Tutorial:
Reference Assembly - Mapping Reads To A Reference Genome
reference
samtools
mapping
bwa
updated 7 weeks ago by
Ram
38k • written 9.8 years ago by
Joseph Hughes
★ 3.0k
13
votes
9
replies
4.1k
views
Tutorial:
TCGA transcriptome data to R (DESeq2)
TCGA
GDC
DESeq2
updated 9 months ago by
dk0319
▴ 40 • written 16 months ago by
Barry Digby
★ 1.1k
8
votes
9
replies
10k
views
Tutorial:
Extracting subset of records from FASTA/FASTQ files based on exact/pattern matches of IDs (ONE-LINERS)
fastq
fasta
updated 26 days ago by
Ram
38k • written 9.0 years ago by
umer.zeeshan.ijaz
★ 1.8k
40
votes
9
replies
10k
views
10 follow
Tutorial:
Resources for flow cytometry bioinformatics
single-cell
flow-cytometry
updated 26 days ago by
Ram
38k • written 9.0 years ago by
Ahill
★ 1.9k
99
votes
8
replies
27k
views
8 follow
Tutorial:
Guide to TCGA data
TCGA
cancer
tools
RNA-Seq
clinical
Tutorial
updated 6.3 years ago by
ewre
▴ 250 • written 7.1 years ago by
Jordan Anaya
★ 1.1k
81
votes
8
replies
7.8k
views
6 follow
Tutorial:
Current Topics in Genome Analysis 2014 (collection of educational lectures)
workshop
lectures
genomics
training
updated 26 days ago by
Ram
38k • written 8.8 years ago by
Malachi Griffith
19k
37
votes
8
replies
9.3k
views
10 follow
Tutorial:
Methylation Analysis Tutorial in R_part1
cancer
R
methylation
updated 23 days ago by
Ram
38k • written 2.5 years ago by
Hamid Ghaedi
2.9k
30
votes
8
replies
10k
views
7 follow
Tutorial:
How To Create A Bioinformatics Pipeline Using Spotify !
python
pipeline
updated 26 days ago by
Ram
38k • written 9.0 years ago by
Rad
▴ 800
7
votes
8
replies
3.0k
views
Tutorial:
Determine if a transcription factor is bound with CENTIPEDE
ChIP-Seq
transcription-factor
DNase-Seq
CENTIPEDE
updated 3 months ago by
Ram
38k • written 7.8 years ago by
Kamil
★ 2.2k
23
votes
8
replies
4.9k
views
Tutorial:
A Practical (And Opinionated) Guide To Analyzing Human Methylation 450K Data
450K
methylation
updated 15 months ago by
Ram
38k • written 8.6 years ago by
brentp
24k
13
votes
8
replies
3.2k
views
Tutorial:
Setting up Aspera Connect (ascp) on Linux and macOS
aspera
ascp
4 months ago by
ATpoint
71k
14
votes
7
replies
5.5k
views
Tutorial:
Visualization of ChIP-Seq peak overlaps using HOMER mergePeaks and UpSetR
ChIP-Seq
peaks
R
HOMER
updated 18 days ago by
Ram
38k • written 6.9 years ago by
steve
★ 3.3k
20
votes
7
replies
5.6k
views
Tutorial:
Showing up and down regulated GO and pathway using enrichR and ggplot2
ggplot2
RNA-Seq
R
updated 18 days ago by
Ram
38k • written 4.5 years ago by
ahmad mousavi
▴ 740
10
votes
7
replies
1.1k
views
Tutorial:
Sequence Alignment from Scratch with BWA
alignment
bwa
DNA
2 days ago by
barslmn
★ 1.4k
8
votes
7
replies
7.7k
views
Tutorial:
Getting Cegma/Genewise To Work On Centos, Rhel
centos
genewise
rhel
cegma
updated 14 months ago by
Ram
38k • written 9.3 years ago by
Adrian Pelin
★ 2.6k
11
votes
7
replies
4.5k
views
Tutorial:
STARsolo config for 10x Chromium v1, v2, v3
Chromium
10x
STARsolo
STAR
updated 18 days ago by
Ram
38k • written 2.5 years ago by
Kevin Blighe
85k
16
votes
7
replies
12k
views
Tutorial:
Integrating VDJ sequencing data with Seurat
VDJ
Seurat
sc-RNAseq
clonotyping
updated 18 days ago by
Ram
38k • written 3.8 years ago by
atakanekiz
▴ 310
48
votes
7
replies
11k
views
7 follow
Tutorial:
Genome Assembly Review Papers
assembly
papers
updated 5 weeks ago by
Ram
38k • written 10.6 years ago by
Istvan Albert
97k
9
votes
7
replies
6.1k
views
Tutorial:
ClusterProfiler A software for functional enrichment of differentially expressed genes- A tutorial
Software
clusterProfiler
Tool
rna-seq
tool
updated 6 months ago by
Shubham
• 0 • written 2.1 years ago by
Novogene
▴ 240
10
votes
7
replies
13k
views
Tutorial:
Removing rows with duplicate values based on 1 or more key values - linux awk
awk
bash
duplicates
linux
Tutorial
updated 5.6 years ago by
Alex Reynolds
34k • written 5.6 years ago by
Kevin Blighe
85k
43
votes
6
replies
11k
views
Tutorial:
Annotating TCGA MAFs with the latest Ensembl/Gencode transcripts
ensembl
maf
tcga
vcf
updated 4 weeks ago by
Ram
38k • written 9.2 years ago by
Cyriac Kandoth
5.9k
67
votes
6
replies
24k
views
7 follow
Tutorial:
Rna-Seq Review Papers
RNA-seq
papers
updated 5 weeks ago by
Ram
38k • written 10.6 years ago by
Istvan Albert
97k
60
votes
6
replies
8.9k
views
Tutorial:
Minimum Standards For Bioinformatics Command Line Tools
command-line
updated 4 weeks ago by
Ram
38k • written 9.6 years ago by
Medhat
9.5k
11
votes
6
replies
4.5k
views
Tutorial:
sharing some naive codes for microarray normalization in R with whom are too new in R alike me
R
updated 8 months ago by
Ram
38k • written 7.1 years ago by
fi1d18
★ 4.1k
2
votes
6
replies
2.8k
views
Tutorial:
Rembrandt Glioma Data Analysis (PART I) - Are Gender specific genes related to cancer ?
R
gene
Tutorial
Rembrandt
updated 5.9 years ago by
wq06100
• 0 • written 6.7 years ago by
majuang66
▴ 140
15
votes
6
replies
5.7k
views
Tutorial:
How to make your snakefiles self-documenting
snakemake
Tutorial
updated 6.1 years ago by
Eric Lim
★ 2.0k • written 6.4 years ago by
Botond Sipos
★ 1.7k
13
votes
6
replies
5.2k
views
Tutorial:
Trim & align paired-end reads in a single pass
trim
align
paired-end fastq
pipe
Tutorial
6.8 years ago by
dariober
14k
31
votes
6
replies
8.8k
views
Tutorial:
A simple tutorial for a complex ComplexHeatmap
clustering
pam
arthritis
ComplexHeatmap
updated 18 days ago by
Ram
38k • written 2.9 years ago by
Kevin Blighe
85k
352 results • Page
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Please accept this answer (green check mark) to provide closure to this thread.
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Thank you very much for your reply ! It's working now !
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