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Tutorial:
OrthoMCL installation on Ubuntu Linux
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Recent Replies
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A: GC content analysis using EdgeR by
h.mon ♦ 20k
You can't, edgeR is a R package to perform differential gene expression analysis. What do you me...
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C: Compare data from two different table using R by
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Very thanks Chirag, i am receiving an error : `Error in mutate_impl(.data, dots) : Evaluation er...
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C: Reading methylation without IDAT files downloaded from GEO by
halo22 • 110
Thank you! I will reach out to the person who uploaded the data and ask for IDAT's.
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Time course expression analysis could be much more involved than straight differential expression...
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I think it depends on the level of taxonomy/phylogeny you're trying to resolve. Above species lev...
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A: manipulating a file by R or bash? by
zx8754 ♦ 5.3k
By the time I posted this answer the data got removed, so I am using below as example input: ...
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C: manipulating a file by R or bash? by
zx8754 ♦ 5.3k
Where is the data gone?
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C: Sorting fq data into groups with missing barcode info? by
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I was thinking that since the barcodes are not missing, perhaps a simple approach could work, som...
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C: Sorting fq data into groups with missing barcode info? by
genomax ♦ 57k
I have already linked a tool that will do that here: https://www.biostars.org/p/342928/#343484
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A: Sorting fq data into groups with missing barcode info? by
Istvan Albert ♦♦ 77k
If you have all three files then you can match back the barcodes by sequence ID. I believe that ...
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Charles Warden ♦ 5.4k
For human, there are some FASTA transcriptome references from [GENCODE][1]. However, you may wan...
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C: Reading methylation without IDAT files downloaded from GEO by
Charles Warden ♦ 5.4k
FYI, I have confirmed that you can add .idat files to an earlier project.
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