Showing: ucscreset
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3
votes
1
answer
108
views
1
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Visualising BedGraph files on UCSC [custom tracks]
genome bedgraph visualisation ucsc written 3 days ago by anupriyaverma1408100 • updated 2 days ago by arup20
0
votes
0
answers
108
views
0
answers
1
vote
2
answers
92
views
2
answers
trying to identify all tss' for a mouse genomewide
bioconductor galaxy biomart rna-seq ucsc written 8 days ago by omd10 • updated 8 days ago by Charles Plessy2.0k
15
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3
answers
1.4k
views
11 follow
3
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How To Install The Ucsc In The Linux Operating System
ucsc written 5.1 years ago by Echo40 • updated 13 days ago by chromosomegun260
0
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0
answers
77
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0
answers
2
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0
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86
views
0
answers
10
votes
1
answer
486
views
1
answer
Which source of annotation files to use, Ensembl or UCSC?
ensembl rna-seq ucsc written 10 months ago by epigene360 • updated 17 days ago by Emily_Ensembl11k
0
votes
1
answer
82
views
1
answer
Table Browser refGene identifiers question
table browser ucsc written 18 days ago by rbronste110 • updated 18 days ago by Pierre Lindenbaum95k
1
vote
1
answer
117
views
1
answer
Repeatmasker output match input
ucsc match output input repeatmasker written 28 days ago by Kian0 • updated 26 days ago by Devon Ryan68k
2
votes
1
answer
865
views
1
answer
Cds From Ucsc Not Always Modulus 3
ucsc written 3.9 years ago by Max120 • updated 4 weeks ago by Petr Ponomarenko2.4k
1
vote
2
answers
131
views
2
answers
Getting avg gene length from GTF (for all splice isoforms)
table browser gtf rna-seq ucsc written 5 weeks ago by rbronste110 • updated 5 weeks ago by Alex Reynolds19k
24
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4
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4.0k
views
9 follow
4
answers
Ucsc/Ensembl Bam Converter?
ensembl bam reference ucsc written 6.0 years ago by 2184687-1231-83-4.8k • updated 5 weeks ago by balwierz0
3
votes
1
answer
183
views
1
answer
visualization of DMRcate or minfi output on UCSC
450k dmrcate track hub minfi ucsc written 6 weeks ago by rahel1435010 • updated 6 weeks ago by asyavuz130
1
vote
2
answers
311
views
2
answers
Potential bug in mafsInRegion?
mafsinregion ucsc_genome_browser ucsc written 6 months ago by Thomas80 • updated 6 weeks ago by vakirlisnikos10
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0
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118
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0
answers
0
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0
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93
views
0
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4
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3
answers
193
views
3
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Table browser +/- 2Kb of TSS export
table broswer ucsc written 8 weeks ago by rbronste110 • updated 7 weeks ago by mmmmcandrew60
7
votes
3
answers
2.0k
views
3
answers
Genome Reference For Bam Files In Ensembl Vs Ucsc?
next-gen sequencing reference ensembl bam ucsc written 6.0 years ago by 2184687-1231-83-4.8k • updated 7 weeks ago by Biostar ♦♦ 20
7
votes
1
answer
197
views
1
answer
Convert cds .fa to bed
fasta ensembl bed cds ucsc written 8 weeks ago by bioinfo870
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0
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165
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0
answers
0
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0
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141
views
0
answers
1
vote
1
answer
133
views
1
answer
oligoMatch from ucsc
oligomatch ucsc written 11 weeks ago by theodore20 • updated 11 weeks ago by Emily_Ensembl11k
2
votes
1
answer
150
views
1
answer
3
votes
1
answer
145
views
1
answer
about Mapability and Blacklisted regions?
mapability ucsc written 12 weeks ago by morovatunc340 • updated 12 weeks ago by Devon Ryan68k
1
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2
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199
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2
answers
1
vote
1
answer
160
views
1
answer
3
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1
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650
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1
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get chr, chrStart, chrEnd, GeneSymbol, strand from UCSC using mysql
genome mysql ucsc written 2.2 years ago by jfertaj50 • updated 3 months ago by Biostar ♦♦ 20
0
votes
1
answer
197
views
1
answer
Make a sequence logo from information in a file?
pssm galaxy sequence logo ucsc written 3 months ago by o3964fn4n0 • updated 3 months ago by Alex Reynolds19k
3
votes
1
answer
257
views
1
answer
Where can I get hg19.omimAvSnp and hg19.omimAv tables?
omim ucsc written 3 months ago by o3964fn4n0 • updated 3 months ago by genecats.ucsc240
6
votes
2
answers
224
views
5 follow
2
answers
Figure quality browser tracks
sequencing ucsc igv browser written 3 months ago by rbronste110 • updated 3 months ago by Ben_Ensembl270
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