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40
votes
4
answers
7.1k
views
9 follow
4
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How To Get Gene Regions +3Kb Upstream
gtf ucsc written 8.1 years ago by Stephen2.7k • updated 13 hours ago by Biostar ♦♦ 20
4
votes
1
answer
236
views
1
answer
RepeatMasker data download
assembly repeatmasker ucsc written 7 months ago by devarora240 • updated 5 days ago by Biostar ♦♦ 20
0
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0
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58
views
0
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1
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1
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131
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1
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1
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150
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1
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114
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1
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0
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105
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0
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2
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1
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403
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1
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Downloading hg38 centromere and telomere positions from UCSC table browser
genome R ucsc written 6 months ago by graeme.thorn50 • updated 5 weeks ago by ATpoint40k
0
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1
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128
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1
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2
votes
1
answer
160
views
1
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UCSC Table Browser Filter Constraints for MAF > 5%
table browser maf ucsc written 10 weeks ago by dumeir20 • updated 7 weeks ago by Luis Nassar420
1
vote
2
answers
219
views
2
answers
R package or tool to draw peaks on chromosomes (like in UCSC)
R visualization ucsc written 9 weeks ago by blur140 • updated 8 weeks ago by bernatgel2.7k
1
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0
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144
views
0
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0
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0
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186
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0
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2
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1
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246
views
1
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4
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200
views
0
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Detect discrepancies in GFF files
agat gffread rna-seq ucsc written 4 months ago by nlehmann100 • updated 4 months ago by Biostar ♦♦ 20
2
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0
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235
views
6 follow
0
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0
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0
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131
views
0
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0
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0
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1.1k
views
0
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3'UTR Strip from all genes
genome python utr mysql ucsc written 3.4 years ago by josolvason0 • updated 4 months ago by Biostar ♦♦ 20
1
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239
views
0
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0
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0
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229
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0
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4
votes
1
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253
views
1
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UCSC track hub: how to best include a GTF / GFF file
annotation ucsc trackhub written 5 months ago by nlehmann100 • updated 5 months ago by Luis Nassar420
9
votes
3
answers
2.6k
views
5 follow
3
answers
Identifying Genes That Lie Either Side Of Intergenic Regions
ucsc written 7.4 years ago by ancient_learner630 • updated 5 months ago by Biostar ♦♦ 20
0
votes
1
answer
959
views
1
answer
UCSC MAF format left or right align gaps?
genome maf ucsc written 3.5 years ago by jxmavs0 • updated 6 months ago by Kevin Blighe66k
1
vote
1
answer
191
views
1
answer
3
votes
2
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396
views
5 follow
2
answers
KentUtils installation issue
installation ucsc kentutils lastz linux written 6 months ago by devarora240 • updated 6 months ago by Luis Nassar420
5
votes
1
answer
292
views
1
answer
Local installation of UCSC Genome Browser
genome ucsc browser written 7 months ago by dahun7310 • updated 7 months ago by RamRS30k
2
votes
0
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151
views
0
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4
votes
1
answer
197
views
5 follow
1
answer
ucsc ids conversion
ucsc genecode conversion ensamble written 8 months ago by annaA10 • updated 7 months ago by max40
4
votes
1
answer
198
views
1
answer
UCSC browser track description can't be updated
genome browser browser custom track ucsc written 8 months ago by Sperber10 • updated 8 months ago by Luis Nassar420
5
votes
1
answer
226
views
1
answer
Difference between UCSC annotation files
assembly ucsc written 8 months ago by nlehmann100 • updated 8 months ago by danielschmelter90
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