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Expression cutoff for UMI
umi gene expression written 4 months ago by JulianC10 • updated 4 months ago by i.sudbery8.4k
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How to analyze DNA data with UMI
bioinformatics umi next-gen sequencing written 4 months ago by deniselavezzari0 • updated 4 months ago by genomax87k
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Long read UMI
umi onp pacbio fastp written 4 months ago by lager0
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Downsampling UMI reads
umi next-gen rna-seq written 6 months ago by Bedirhan0 • updated 6 months ago by Kevin Blighe63k
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UMI read consensus calling
umi next-gen unique molecular identifier nanopore written 6 months ago by SemiQuant70 • updated 6 months ago by i.sudbery8.4k
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Bulk RNA-Seq pipeline suggestion incorporating UMIs
bulk umi rna-seq written 7 months ago by steveh30 • updated 7 months ago by swbarnes28.1k
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UMI on the fastq header
illumina umi fastq umi-tools rna-seq written 8 months ago by Ati30
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Consensus reads from UMIs
umi dna-seq deduplication written 11 months ago by graeme.thorn50 • updated 11 months ago by finswimmer13k
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Question about deduplication with UMI-tools
umi deduplication sequencing written 12 months ago by Chadi Saad70 • updated 12 months ago by i.sudbery8.4k
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UMI with MACS
macs umi chip-seq written 15 months ago by Richard570 • updated 15 months ago by i.sudbery8.4k
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How to deduplicate UMI with mapping shift ?
umi written 18 months ago by tatsuomano10 • updated 18 months ago by i.sudbery8.4k
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De-duplicate UMI at FASTQ level
umi fastq written 21 months ago by jomo018610 • updated 18 months ago by Rituriya30
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add UMI sequences to fastq read name
illumina umi fastq written 19 months ago by User6891270 • updated 18 months ago by i.sudbery8.4k
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miRNA with UMI - any papers showing this improves accuracy?
umi mirna written 2.2 years ago by Richard570 • updated 18 months ago by Rituriya30
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Is Kallisto able to deal with UMIs and paired-end RNASeq?
umi kallisto rna-seq written 20 months ago by antgomo30 • updated 20 months ago by genomax87k
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how to find the UMi position?
umi alignment written 20 months ago by DNAseq0 • updated 20 months ago by h.mon30k
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Faster UMI extraction from scRNA-Seq data
scrna-seq umi umi_tools rna-seq written 22 months ago by paulranum1160 • updated 22 months ago by benformatics1.7k
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Question about deduplication with UMI-tools
umi rna-seq written 2.0 years ago by GSAENZDEPIP20 • updated 2.0 years ago by genomax87k
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