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Expression cutoff for UMI
umi gene expression written 9 months ago by JulianC10 • updated 9 months ago by i.sudbery10k
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How to analyze DNA data with UMI
bioinformatics umi next-gen sequencing written 10 months ago by deniselavezzari0 • updated 10 months ago by GenoMax95k
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Long read UMI
umi onp pacbio fastp written 10 months ago by lager0
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Downsampling UMI reads
umi next-gen rna-seq written 12 months ago by Bedirhan0 • updated 11 months ago by Kevin Blighe69k
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UMI read consensus calling
umi next-gen unique molecular identifier nanopore written 11 months ago by SemiQuant70 • updated 11 months ago by i.sudbery10k
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Bulk RNA-Seq pipeline suggestion incorporating UMIs
bulk umi rna-seq written 13 months ago by steveh30 • updated 13 months ago by swbarnes29.4k
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UMI on the fastq header
illumina umi fastq umi-tools rna-seq written 13 months ago by Ati30
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Consensus reads from UMIs
umi dna-seq deduplication written 17 months ago by graeme.thorn50 • updated 17 months ago by finswimmer14k
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Question about deduplication with UMI-tools
umi deduplication sequencing written 18 months ago by Chadi Saad80 • updated 18 months ago by i.sudbery10k
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UMI with MACS
macs umi chip-seq written 21 months ago by Richard580 • updated 21 months ago by i.sudbery10k
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How to deduplicate UMI with mapping shift ?
umi written 2.0 years ago by tatsuomano20 • updated 2.0 years ago by i.sudbery10k
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De-duplicate UMI at FASTQ level
umi fastq written 2.3 years ago by jomo018610 • updated 2.0 years ago by Rituriya40
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add UMI sequences to fastq read name
illumina umi fastq written 2.0 years ago by User6891300 • updated 2.0 years ago by i.sudbery10k
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miRNA with UMI - any papers showing this improves accuracy?
umi mirna written 2.6 years ago by Richard580 • updated 2.0 years ago by Rituriya40
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Is Kallisto able to deal with UMIs and paired-end RNASeq?
umi kallisto rna-seq written 2.1 years ago by antgomo30 • updated 2.1 years ago by GenoMax95k
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how to find the UMi position?
umi alignment written 2.2 years ago by DNAseq0 • updated 2.2 years ago by h.mon32k
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Faster UMI extraction from scRNA-Seq data
scrna-seq umi umi_tools rna-seq written 2.4 years ago by paulranum1170 • updated 2.4 years ago by benformatics2.0k
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