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Recent Replies
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C: Create table of gene expression for multiple samples by
Joe ♦ 17k
You will need to tell us what format the data you currently have is.
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A: How to keep the top hits only in the output file of hmmscan? by
audrey.durand • 10
For anyone interested, I figured it out using this amazing resource: **http://slhogle.github.io/2...
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A: TSS metaprofile using Deeptools by
zhuobaowen • 10
You can just download a GTF file from Ensembl or UCSC and use that. computeMatrix will figure out...
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C: star --readFilesIn error when using unmapped.out.mate1/2 files by
Bastien Hervé ♦ 4.7k
There is no `--outReadsUnmapped Fastx` in your command line Furthermore the error says that your...
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A: change axis scale on ggplot2 by
Nicolas Rosewick ♦ 9.0k
It seems that PC1 and PC2 are factors. Change them to numeric and it will work : pca$PC1 &l...
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C: Heatmap for gene expression by
cpad0112 ♦ 13k
post some example data and expected type of image (hand drawn, publication, online link etc).
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C: change axis scale on ggplot2 by
zx8754 ♦ 9.4k
PC "numbers" are not *numeric*: ... PC1 = c("PC1", "0.0915729", "0.0946641", "0.0633914" ......
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A: Could not find the link to obtain a NCBI API key by
Mensur Dlakic • 6.0k
The instructions could not be more clear: > To create the key, go to the “Settings” page of y...
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C: change axis scale on ggplot2 by
cpad0112 ♦ 13k
Your example data is incomplete. Please post complete example data. Change the the intervals on Y...
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C: GFF3 to GTF problems by
cpad0112 ♦ 13k
Try `gffread` from conda
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C: Individuals being duplicated in package PopGenome by
rhys • 10
Hi, I am facing the same problem and wondering if you have found solution to this problem?
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C: Heatmap with VST Normailzed Data by
pthom010 • 0
Thank you. I ended up getting to the root of the problem and I can produce the heatmap now. Howev...
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